RNA–Protein interactions for RNA: ENST00000461504.5

FBXO18-205, Transcript of F-box DNA helicase 1, human

TSL 5

Gene FBXO18, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO18-205	ENST00000461504	CCDC144A	A2RUR9	1427 aa		13.86	□□□□□ -0.19
FBXO18-205	ENST00000461504	IFT172	Q9UG01	1749 aa		13.86	□□□□□ -0.19
FBXO18-205	ENST00000461504	PPL	O60437	1756 aa		13.85	□□□□□ -0.19
FBXO18-205	ENST00000461504	SCAF11	Q99590	1463 aa	Known RBP	13.85	□□□□□ -0.19
FBXO18-205	ENST00000461504	IQGAP1	P46940	1657 aa		13.85	□□□□□ -0.19
FBXO18-205	ENST00000461504	SPATA31E1	Q6ZUB1	1445 aa		13.84	□□□□□ -0.19
FBXO18-205	ENST00000461504	NEXMIF	Q5QGS0	1516 aa		13.84	□□□□□ -0.19
FBXO18-205	ENST00000461504	TIMELESS	Q9UNS1	1208 aa		13.81	□□□□□ -0.2
FBXO18-205	ENST00000461504	RIMS2	Q9UQ26	1411 aa		13.81	□□□□□ -0.2
FBXO18-205	ENST00000461504	ANKLE2	Q86XL3	938 aa		13.8	□□□□□ -0.2
FBXO18-205	ENST00000461504	STAG3	Q9UJ98	1225 aa		13.8	□□□□□ -0.2
FBXO18-205	ENST00000461504	LTK	P29376	864 aa		13.79	□□□□□ -0.2
FBXO18-205	ENST00000461504	NPHP4	O75161	1426 aa	Predicted RBP	13.79	□□□□□ -0.2
FBXO18-205	ENST00000461504	NRXN3	Q9Y4C0	1643 aa		13.79	□□□□□ -0.2
FBXO18-205	ENST00000461504	DMRT2	Q9Y5R5	561 aa		13.78	□□□□□ -0.2
FBXO18-205	ENST00000461504	NCKAP5L	Q9HCH0	1330 aa		13.78	□□□□□ -0.2
FBXO18-205	ENST00000461504	SETBP1	Q9Y6X0	1596 aa		13.78	□□□□□ -0.2
FBXO18-205	ENST00000461504	PLEKHG1	Q9ULL1	1385 aa		13.77	□□□□□ -0.21
FBXO18-205	ENST00000461504	SETD1A	O15047	1707 aa	Known RBP	13.76	□□□□□ -0.21
FBXO18-205	ENST00000461504	DIP2A	Q14689	1571 aa		13.76	□□□□□ -0.21
FBXO18-205	ENST00000461504	RPGRIP1L	Q68CZ1	1315 aa		13.76	□□□□□ -0.21
FBXO18-205	ENST00000461504	TXNDC2	Q86VQ3	553 aa		13.76	□□□□□ -0.21
FBXO18-205	ENST00000461504	EID1	Q9Y6B2	187 aa		13.76	□□□□□ -0.21
FBXO18-205	ENST00000461504	CHGA	P10645	457 aa	Known RBP	13.75	□□□□□ -0.21
FBXO18-205	ENST00000461504	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
FBXO18-205	ENST00000461504	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.74	□□□□□ -0.21
FBXO18-205	ENST00000461504	HDGF	P51858	240 aa	Known RBP	13.74	□□□□□ -0.21
FBXO18-205	ENST00000461504	MYOM2	P54296	1465 aa		13.74	□□□□□ -0.21
FBXO18-205	ENST00000461504	NRXN1	Q9ULB1	1477 aa		13.74	□□□□□ -0.21
FBXO18-205	ENST00000461504	CHD2	O14647	1828 aa	Known RBP	13.73	□□□□□ -0.21
FBXO18-205	ENST00000461504	STRCP1	A6NGW2	1772 aa		13.73	□□□□□ -0.21
FBXO18-205	ENST00000461504	ADAMTS13	Q76LX8	1427 aa		13.73	□□□□□ -0.21
FBXO18-205	ENST00000461504	LTBP4	Q8N2S1	1624 aa		13.72	□□□□□ -0.21
FBXO18-205	ENST00000461504	NWD1	Q149M9	1564 aa		13.72	□□□□□ -0.21
FBXO18-205	ENST00000461504	SIN3A	Q96ST3	1273 aa		13.72	□□□□□ -0.21
FBXO18-205	ENST00000461504	ZNF326	Q5BKZ1	582 aa	Known RBP	13.71	□□□□□ -0.21
FBXO18-205	ENST00000461504	LAMC1	P11047	1609 aa		13.7	□□□□□ -0.22
FBXO18-205	ENST00000461504	PIK3C2G	O75747	1445 aa		13.69	□□□□□ -0.22
FBXO18-205	ENST00000461504	XRN1	Q8IZH2	1706 aa	Known RBP	13.68	□□□□□ -0.22
FBXO18-205	ENST00000461504	VGF	O15240	615 aa	Predicted RBP	13.68	□□□□□ -0.22
FBXO18-205	ENST00000461504	PPP1R15A	O75807	674 aa	Predicted RBP	13.68	□□□□□ -0.22
FBXO18-205	ENST00000461504	PIK3R4	Q99570	1358 aa		13.68	□□□□□ -0.22
FBXO18-205	ENST00000461504	ALK	Q9UM73	1620 aa		13.68	□□□□□ -0.22
FBXO18-205	ENST00000461504	STAC3	Q96MF2	364 aa		13.67	□□□□□ -0.22
FBXO18-205	ENST00000461504	TBX22	Q9Y458	520 aa		13.67	□□□□□ -0.22
FBXO18-205	ENST00000461504	CPS1	P31327	1500 aa		13.67	□□□□□ -0.22
FBXO18-205	ENST00000461504	KIAA1210	Q9ULL0	1709 aa		13.67	□□□□□ -0.22
FBXO18-205	ENST00000461504	RGL3	Q3MIN7	710 aa		13.66	□□□□□ -0.22
FBXO18-205	ENST00000461504	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.66	□□□□□ -0.22
FBXO18-205	ENST00000461504	PRAG1	Q86YV5	1406 aa		13.65	□□□□□ -0.22
FBXO18-205	ENST00000461504	XIRP1	Q702N8	1843 aa	Known RBP	13.65	□□□□□ -0.22
FBXO18-205	ENST00000461504	NKTR	P30414	1462 aa	Known RBP	13.65	□□□□□ -0.22
FBXO18-205	ENST00000461504	ADGRF5	Q8IZF2	1346 aa		13.64	□□□□□ -0.23
FBXO18-205	ENST00000461504	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.64	□□□□□ -0.23
FBXO18-205	ENST00000461504	ASXL1	Q8IXJ9	1541 aa		13.64	□□□□□ -0.23
FBXO18-205	ENST00000461504	KNDC1	Q76NI1	1749 aa		13.64	□□□□□ -0.23
FBXO18-205	ENST00000461504	IQSEC2	Q5JU85	1478 aa		13.63	□□□□□ -0.23
FBXO18-205	ENST00000461504	SLC26A8	Q96RN1	970 aa		13.63	□□□□□ -0.23
FBXO18-205	ENST00000461504	NEUROD1	Q13562	356 aa		13.61	□□□□□ -0.23
FBXO18-205	ENST00000461504	PTPRU	Q92729	1446 aa		13.61	□□□□□ -0.23
FBXO18-205	ENST00000461504	ADGRB1	O14514	1584 aa		13.61	□□□□□ -0.23
FBXO18-205	ENST00000461504	MET	P08581	1390 aa		13.6	□□□□□ -0.23
FBXO18-205	ENST00000461504	LRRC7	Q96NW7	1537 aa		13.6	□□□□□ -0.23
FBXO18-205	ENST00000461504	KCNA6	P17658	529 aa		13.6	□□□□□ -0.23
FBXO18-205	ENST00000461504	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.6	□□□□□ -0.23
FBXO18-205	ENST00000461504	TONSL	Q96HA7	1378 aa		13.59	□□□□□ -0.23
FBXO18-205	ENST00000461504	DIEXF	Q68CQ4	756 aa	Known RBP	13.59	□□□□□ -0.23
FBXO18-205	ENST00000461504	DCAF11	Q8TEB1	546 aa		13.59	□□□□□ -0.23
FBXO18-205	ENST00000461504	L3MBTL2	Q969R5	705 aa		13.59	□□□□□ -0.23
FBXO18-205	ENST00000461504	C14orf93	Q9H972	538 aa	Known RBP	13.59	□□□□□ -0.23
FBXO18-205	ENST00000461504	TRPM1	Q7Z4N2	1603 aa		13.59	□□□□□ -0.23
FBXO18-205	ENST00000461504	TECPR2	O15040	1411 aa		13.58	□□□□□ -0.24
FBXO18-205	ENST00000461504	PTCH1	Q13635	1447 aa		13.58	□□□□□ -0.24
FBXO18-205	ENST00000461504	BCAN	Q96GW7	911 aa		13.58	□□□□□ -0.24
FBXO18-205	ENST00000461504	NCOA3	Q9Y6Q9	1424 aa		13.56	□□□□□ -0.24
FBXO18-205	ENST00000461504	DLC1	Q96QB1	1528 aa		13.55	□□□□□ -0.24
FBXO18-205	ENST00000461504	LRPPRC	P42704	1394 aa	Known RBP	13.55	□□□□□ -0.24
FBXO18-205	ENST00000461504	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.55	□□□□□ -0.24
FBXO18-205	ENST00000461504	CFAP70	Q5T0N1	1121 aa		13.54	□□□□□ -0.24
FBXO18-205	ENST00000461504	CERK	Q8TCT0	537 aa		13.54	□□□□□ -0.24
FBXO18-205	ENST00000461504	KDM2A	Q9Y2K7	1162 aa		13.54	□□□□□ -0.24
FBXO18-205	ENST00000461504	ABCC11	Q96J66	1382 aa		13.54	□□□□□ -0.24
FBXO18-205	ENST00000461504	NALCN	Q8IZF0	1738 aa		13.53	□□□□□ -0.24
FBXO18-205	ENST00000461504	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.53	□□□□□ -0.24
FBXO18-205	ENST00000461504	AMOTL2	Q9Y2J4	779 aa		13.53	□□□□□ -0.24
FBXO18-205	ENST00000461504	TMEM94	Q12767	1356 aa		13.52	□□□□□ -0.25
FBXO18-205	ENST00000461504	RALGAPB	Q86X10	1494 aa		13.51	□□□□□ -0.25
FBXO18-205	ENST00000461504	FAM135B	Q49AJ0	1406 aa		13.51	□□□□□ -0.25
FBXO18-205	ENST00000461504	ROBO2	Q9HCK4	1378 aa		13.51	□□□□□ -0.25
FBXO18-205	ENST00000461504	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.5	□□□□□ -0.25
FBXO18-205	ENST00000461504	GPRASP1	Q5JY77	1395 aa		13.5	□□□□□ -0.25
FBXO18-205	ENST00000461504	TMEM132E	Q6IEE7	984 aa		13.49	□□□□□ -0.25
FBXO18-205	ENST00000461504	SIRT1	Q96EB6	747 aa		13.49	□□□□□ -0.25
FBXO18-205	ENST00000461504	DCC	P43146	1447 aa		13.48	□□□□□ -0.25
FBXO18-205	ENST00000461504	ADGRL3	Q9HAR2	1447 aa		13.48	□□□□□ -0.25
FBXO18-205	ENST00000461504	NBPF8	Q3BBV2	869 aa		13.48	□□□□□ -0.25
FBXO18-205	ENST00000461504	PROSER2	Q86WR7	435 aa	Predicted RBP	13.48	□□□□□ -0.25
FBXO18-205	ENST00000461504	ADGRB2	O60241	1585 aa		13.47	□□□□□ -0.25
FBXO18-205	ENST00000461504	CDC42BPG	Q6DT37	1551 aa		13.47	□□□□□ -0.25
FBXO18-205	ENST00000461504	NBPF1	Q3BBV0	1214 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms