RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GPR37O15354 613 aa6.27□□□□□ -1.41
VCL-203ENST00000461383 CCDC102AQ96A19 550 aa6.27□□□□□ -1.41
VCL-203ENST00000461383 CDHR5Q9HBB8 845 aa6.26□□□□□ -1.41
VCL-203ENST00000461383 C3orf80F5H4A9 247 aa6.25□□□□□ -1.41
VCL-203ENST00000461383 IRF6O14896 467 aa6.25□□□□□ -1.41
VCL-203ENST00000461383 TATDN2Q93075 761 aa6.25□□□□□ -1.41
VCL-203ENST00000461383 IRX2Q9BZI1 471 aaPredicted RBP6.25□□□□□ -1.41
VCL-203ENST00000461383 TTLL12Q14166 644 aaPredicted RBP6.24□□□□□ -1.41
VCL-203ENST00000461383 SAMD7Q7Z3H4 446 aa6.24□□□□□ -1.41
VCL-203ENST00000461383 NPDC1Q9NQX5 325 aaPredicted RBP6.24□□□□□ -1.41
VCL-203ENST00000461383 PNMA3Q9UL41 463 aa6.24□□□□□ -1.41
VCL-203ENST00000461383 PPP4CP60510 307 aa6.23□□□□□ -1.41
VCL-203ENST00000461383 PTGDRQ13258 359 aa6.23□□□□□ -1.41
VCL-203ENST00000461383 TJAP1Q5JTD0 557 aa6.23□□□□□ -1.41
VCL-203ENST00000461383 SMAPO00193 183 aa6.22□□□□□ -1.41
VCL-203ENST00000461383 FECHP22830 423 aa6.22□□□□□ -1.41
VCL-203ENST00000461383 NECTIN2Q92692 538 aa6.22□□□□□ -1.41
VCL-203ENST00000461383 DDRGK1Q96HY6 314 aa6.22□□□□□ -1.41
VCL-203ENST00000461383 AMHR2Q16671 573 aa6.21□□□□□ -1.42
VCL-203ENST00000461383 FAM117AQ9C073 453 aa6.21□□□□□ -1.42
VCL-203ENST00000461383 PADI6Q6TGC4 694 aa6.2□□□□□ -1.42
VCL-203ENST00000461383 NUDT18Q6ZVK8 323 aa6.2□□□□□ -1.42
VCL-203ENST00000461383 IL21Q9HBE4 155 aa6.2□□□□□ -1.42
VCL-203ENST00000461383 PARP9Q8IXQ6 854 aa6.19□□□□□ -1.42
VCL-203ENST00000461383 EYA1Q99502 592 aa6.18□□□□□ -1.42
VCL-203ENST00000461383 MTRQ99707 1265 aa6.18□□□□□ -1.42
VCL-203ENST00000461383 APLP1P51693 650 aa6.17□□□□□ -1.42
VCL-203ENST00000461383 HDGFP51858 240 aaKnown RBP6.17□□□□□ -1.42
VCL-203ENST00000461383 SLF2Q8IX21 1173 aa6.17□□□□□ -1.42
VCL-203ENST00000461383 CLCN1P35523 988 aa6.16□□□□□ -1.42
VCL-203ENST00000461383 LAPTM4AQ15012 233 aa6.16□□□□□ -1.42
VCL-203ENST00000461383 SWT1Q5T5J6 900 aaKnown RBP6.16□□□□□ -1.42
VCL-203ENST00000461383 GIGYF2Q6Y7W6 1299 aaKnown RBP6.16□□□□□ -1.42
VCL-203ENST00000461383 ATP1B4Q9UN42 357 aaPredicted RBP6.16□□□□□ -1.42
VCL-203ENST00000461383 V9GY48 417 aaPredicted RBP6.15□□□□□ -1.42
VCL-203ENST00000461383 PLEKHG3A1L390 1219 aa6.14□□□□□ -1.43
VCL-203ENST00000461383 SUPT5HO00267 1087 aaKnown RBP6.14□□□□□ -1.43
VCL-203ENST00000461383 PRR14Q9BWN1 585 aa6.14□□□□□ -1.43
VCL-203ENST00000461383 MDM2Q00987 491 aaPredicted RBP6.13□□□□□ -1.43
VCL-203ENST00000461383 PPP1R18Q6NYC8 613 aa6.13□□□□□ -1.43
VCL-203ENST00000461383 PCMTD1Q96MG8 357 aaPredicted RBP6.13□□□□□ -1.43
VCL-203ENST00000461383 GPCPD1Q9NPB8 672 aa6.13□□□□□ -1.43
VCL-203ENST00000461383 RNF40O75150 1001 aa6.12□□□□□ -1.43
VCL-203ENST00000461383 OATP04181 439 aa6.12□□□□□ -1.43
VCL-203ENST00000461383 DNAJB2P25686 324 aa6.12□□□□□ -1.43
VCL-203ENST00000461383 SLC4A3P48751 1232 aa6.12□□□□□ -1.43
VCL-203ENST00000461383 ZNF516Q92618 1163 aa6.12□□□□□ -1.43
VCL-203ENST00000461383 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.12□□□□□ -1.43
VCL-203ENST00000461383 ADGRG1Q9Y653 693 aa6.12□□□□□ -1.43
VCL-203ENST00000461383 MS4A1P11836 297 aa6.11□□□□□ -1.43
VCL-203ENST00000461383 ARXQ96QS3 562 aa6.11□□□□□ -1.43
VCL-203ENST00000461383 TMUB1Q9BVT8 246 aa6.11□□□□□ -1.43
VCL-203ENST00000461383 TMEM134Q9H6X4 195 aa6.11□□□□□ -1.43
VCL-203ENST00000461383 ZPR1O75312 459 aa6.1□□□□□ -1.43
VCL-203ENST00000461383 FAM161AQ3B820 660 aa6.1□□□□□ -1.43
VCL-203ENST00000461383 Q6ZNB5 142 aa6.1□□□□□ -1.43
VCL-203ENST00000461383 RBM46Q8TBY0 533 aaKnown RBP6.1□□□□□ -1.43
VCL-203ENST00000461383 REPIN1Q9BWE0 567 aaKnown RBP6.1□□□□□ -1.43
VCL-203ENST00000461383 PRKD2Q9BZL6 878 aa6.1□□□□□ -1.43
VCL-203ENST00000461383 NRG2O14511 850 aaPredicted RBP6.09□□□□□ -1.43
VCL-203ENST00000461383 LCE2BO14633 110 aa6.09□□□□□ -1.43
VCL-203ENST00000461383 SSTR3P32745 418 aaPredicted RBP6.09□□□□□ -1.43
VCL-203ENST00000461383 METTL3Q86U44 580 aaKnown RBP6.09□□□□□ -1.43
VCL-203ENST00000461383 ZMYND15Q9H091 742 aa6.09□□□□□ -1.43
VCL-203ENST00000461383 RSPH6AQ9H0K4 717 aa6.09□□□□□ -1.43
VCL-203ENST00000461383 GOPCQ9HD26 462 aa6.09□□□□□ -1.43
VCL-203ENST00000461383 GGCXP38435 758 aa6.08□□□□□ -1.44
VCL-203ENST00000461383 FLIIQ13045 1269 aa6.08□□□□□ -1.44
VCL-203ENST00000461383 BEGAINQ9BUH8 593 aa6.08□□□□□ -1.44
VCL-203ENST00000461383 PCDHB3Q9Y5E6 796 aa6.08□□□□□ -1.44
VCL-203ENST00000461383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.07□□□□□ -1.44
VCL-203ENST00000461383 ACTN4O43707 911 aaKnown RBP6.07□□□□□ -1.44
VCL-203ENST00000461383 GFRA3O60609 400 aa6.07□□□□□ -1.44
VCL-203ENST00000461383 HOMEZQ8IX15 550 aa6.07□□□□□ -1.44
VCL-203ENST00000461383 NKX2-3Q8TAU0 364 aa6.07□□□□□ -1.44
VCL-203ENST00000461383 NLRP7Q8WX94 980 aa6.07□□□□□ -1.44
VCL-203ENST00000461383 PHOX2BQ99453 314 aa6.07□□□□□ -1.44
VCL-203ENST00000461383 RCCD1A6NED2 376 aa6.06□□□□□ -1.44
VCL-203ENST00000461383 COPS2P61201 443 aa6.06□□□□□ -1.44
VCL-203ENST00000461383 SH3D19Q5HYK7 790 aa6.06□□□□□ -1.44
VCL-203ENST00000461383 PXYLP1Q8TE99 480 aa6.06□□□□□ -1.44
VCL-203ENST00000461383 KMT5BQ4FZB7 885 aa6.05□□□□□ -1.44
VCL-203ENST00000461383 BLOC1S3Q6QNY0 202 aa6.05□□□□□ -1.44
VCL-203ENST00000461383 FAM217BQ9NTX9 383 aaPredicted RBP6.05□□□□□ -1.44
VCL-203ENST00000461383 SKIV2LQ15477 1246 aaKnown RBP6.04□□□□□ -1.44
VCL-203ENST00000461383 CFHP08603 1231 aa6.03□□□□□ -1.44
VCL-203ENST00000461383 SLC10A3P09131 477 aa6.03□□□□□ -1.44
VCL-203ENST00000461383 DIXDC1Q155Q3 683 aa6.03□□□□□ -1.44
VCL-203ENST00000461383 TRAF7Q6Q0C0 670 aa6.03□□□□□ -1.44
VCL-203ENST00000461383 ANKLE1Q8NAG6 615 aa6.03□□□□□ -1.44
VCL-203ENST00000461383 POLR3EQ9NVU0 708 aa6.03□□□□□ -1.44
VCL-203ENST00000461383 RNF223E7ERA6 249 aa6.02□□□□□ -1.45
VCL-203ENST00000461383 EMID1Q96A84 441 aaPredicted RBP6.02□□□□□ -1.45
VCL-203ENST00000461383 TLL1O43897 1013 aa6.01□□□□□ -1.45
VCL-203ENST00000461383 ADH1BP00325 375 aa6.01□□□□□ -1.45
VCL-203ENST00000461383 UBTFP17480 764 aaKnown RBP6.01□□□□□ -1.45
VCL-203ENST00000461383 SULF1Q8IWU6 871 aa6.01□□□□□ -1.45
VCL-203ENST00000461383 CLK2P49760 499 aaKnown RBP6□□□□□ -1.45
VCL-203ENST00000461383 PRR20EP86478 221 aa6□□□□□ -1.45
VCL-203ENST00000461383 PRR20CP86479 221 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms