RNA–Protein interactions for RNA: ENST00000461336.5

KCNIP3-204, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 2

Gene KCNIP3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-204ENST00000461336 PROSER2Q86WR7 435 aaPredicted RBP18.49■□□□□ 0.55
KCNIP3-204ENST00000461336 NOS1P29475 1434 aa18.49■□□□□ 0.55
KCNIP3-204ENST00000461336 ADGRL2O95490 1459 aa18.48■□□□□ 0.55
KCNIP3-204ENST00000461336 IDI1Q13907 227 aa18.48■□□□□ 0.55
KCNIP3-204ENST00000461336 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
KCNIP3-204ENST00000461336 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
KCNIP3-204ENST00000461336 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
KCNIP3-204ENST00000461336 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
KCNIP3-204ENST00000461336 SPATA31A6Q5VVP1 1343 aa18.47■□□□□ 0.55
KCNIP3-204ENST00000461336 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
KCNIP3-204ENST00000461336 MSH6P52701 1360 aa18.46■□□□□ 0.55
KCNIP3-204ENST00000461336 SLC26A8Q96RN1 970 aa18.45■□□□□ 0.54
KCNIP3-204ENST00000461336 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
KCNIP3-204ENST00000461336 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
KCNIP3-204ENST00000461336 RPRD2Q5VT52 1461 aaKnown RBP18.43■□□□□ 0.54
KCNIP3-204ENST00000461336 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
KCNIP3-204ENST00000461336 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
KCNIP3-204ENST00000461336 RXRBP28702 533 aa18.41■□□□□ 0.54
KCNIP3-204ENST00000461336 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
KCNIP3-204ENST00000461336 MEX3CQ5U5Q3 659 aaKnown RBP18.4■□□□□ 0.54
KCNIP3-204ENST00000461336 DIP2AQ14689 1571 aa18.38■□□□□ 0.53
KCNIP3-204ENST00000461336 CHD2O14647 1828 aaKnown RBP18.37■□□□□ 0.53
KCNIP3-204ENST00000461336 RGS12O14924 1447 aa18.36■□□□□ 0.53
KCNIP3-204ENST00000461336 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
KCNIP3-204ENST00000461336 ZFYVE9O95405 1425 aa18.35■□□□□ 0.53
KCNIP3-204ENST00000461336 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
KCNIP3-204ENST00000461336 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
KCNIP3-204ENST00000461336 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
KCNIP3-204ENST00000461336 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
KCNIP3-204ENST00000461336 RIMS2Q9UQ26 1411 aa18.31■□□□□ 0.52
KCNIP3-204ENST00000461336 UNC13BO14795 1591 aa18.3■□□□□ 0.52
KCNIP3-204ENST00000461336 AFF2P51816 1311 aa18.3■□□□□ 0.52
KCNIP3-204ENST00000461336 TMEM131LA2VDJ0 1609 aa18.3■□□□□ 0.52
KCNIP3-204ENST00000461336 BCANQ96GW7 911 aa18.29■□□□□ 0.52
KCNIP3-204ENST00000461336 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
KCNIP3-204ENST00000461336 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
KCNIP3-204ENST00000461336 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
KCNIP3-204ENST00000461336 SETBP1Q9Y6X0 1596 aa18.27■□□□□ 0.52
KCNIP3-204ENST00000461336 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
KCNIP3-204ENST00000461336 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
KCNIP3-204ENST00000461336 EP400Q96L91 3159 aa18.26■□□□□ 0.51
KCNIP3-204ENST00000461336 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
KCNIP3-204ENST00000461336 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
KCNIP3-204ENST00000461336 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
KCNIP3-204ENST00000461336 MYO5BQ9ULV0 1848 aa18.24■□□□□ 0.51
KCNIP3-204ENST00000461336 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
KCNIP3-204ENST00000461336 CADPS2Q86UW7 1296 aa18.24■□□□□ 0.51
KCNIP3-204ENST00000461336 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
KCNIP3-204ENST00000461336 E9PCH4 1651 aa18.23■□□□□ 0.51
KCNIP3-204ENST00000461336 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
KCNIP3-204ENST00000461336 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
KCNIP3-204ENST00000461336 IQGAP3Q86VI3 1631 aa18.23■□□□□ 0.51
KCNIP3-204ENST00000461336 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
KCNIP3-204ENST00000461336 C19orf44Q9H6X5 657 aa18.22■□□□□ 0.51
KCNIP3-204ENST00000461336 NHSL1Q5SYE7 1610 aa18.22■□□□□ 0.51
KCNIP3-204ENST00000461336 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
KCNIP3-204ENST00000461336 NUTM2DQ5VT03 806 aaPredicted RBP18.2■□□□□ 0.5
KCNIP3-204ENST00000461336 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
KCNIP3-204ENST00000461336 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
KCNIP3-204ENST00000461336 ATAD2Q6PL18 1390 aa18.19■□□□□ 0.5
KCNIP3-204ENST00000461336 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
KCNIP3-204ENST00000461336 ATF3P18847 181 aa18.19■□□□□ 0.5
KCNIP3-204ENST00000461336 NUP155O75694 1391 aa18.18■□□□□ 0.5
KCNIP3-204ENST00000461336 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
KCNIP3-204ENST00000461336 C8orf37Q96NL8 207 aa18.18■□□□□ 0.5
KCNIP3-204ENST00000461336 ZRANB1Q9UGI0 708 aa18.17■□□□□ 0.5
KCNIP3-204ENST00000461336 DCCP43146 1447 aa18.16■□□□□ 0.5
KCNIP3-204ENST00000461336 PNPLA6Q8IY17 1366 aa18.16■□□□□ 0.5
KCNIP3-204ENST00000461336 TRPM2O94759 1503 aa18.15■□□□□ 0.5
KCNIP3-204ENST00000461336 MST1RQ04912 1400 aa18.15■□□□□ 0.5
KCNIP3-204ENST00000461336 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
KCNIP3-204ENST00000461336 AMOTL2Q9Y2J4 779 aa18.12■□□□□ 0.49
KCNIP3-204ENST00000461336 LRRC59Q96AG4 307 aaKnown RBP18.1■□□□□ 0.49
KCNIP3-204ENST00000461336 NGLY1Q96IV0 654 aa18.1■□□□□ 0.49
KCNIP3-204ENST00000461336 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
KCNIP3-204ENST00000461336 ITGAEP38570 1179 aa18.08■□□□□ 0.48
KCNIP3-204ENST00000461336 FOXD1Q16676 465 aa18.08■□□□□ 0.48
KCNIP3-204ENST00000461336 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
KCNIP3-204ENST00000461336 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.48
KCNIP3-204ENST00000461336 SPHKAPQ2M3C7 1700 aa18.06■□□□□ 0.48
KCNIP3-204ENST00000461336 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
KCNIP3-204ENST00000461336 ATRNO75882 1429 aa18.06■□□□□ 0.48
KCNIP3-204ENST00000461336 LRP5O75197 1615 aa18.04■□□□□ 0.48
KCNIP3-204ENST00000461336 LAMC1P11047 1609 aa18.04■□□□□ 0.48
KCNIP3-204ENST00000461336 USP21Q9UK80 565 aa18.03■□□□□ 0.48
KCNIP3-204ENST00000461336 TRPC5Q9UL62 973 aaPredicted RBP18.03■□□□□ 0.48
KCNIP3-204ENST00000461336 METP08581 1390 aa18.03■□□□□ 0.48
KCNIP3-204ENST00000461336 ZNF326Q5BKZ1 582 aaKnown RBP18.02■□□□□ 0.48
KCNIP3-204ENST00000461336 CCDC125Q86Z20 511 aa18.02■□□□□ 0.48
KCNIP3-204ENST00000461336 FNBP4Q8N3X1 1017 aaPredicted RBP18.02■□□□□ 0.48
KCNIP3-204ENST00000461336 NALCNQ8IZF0 1738 aa18.01■□□□□ 0.47
KCNIP3-204ENST00000461336 ADGRL3Q9HAR2 1447 aa18■□□□□ 0.47
KCNIP3-204ENST00000461336 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
KCNIP3-204ENST00000461336 PTCH1Q13635 1447 aa17.99■□□□□ 0.47
KCNIP3-204ENST00000461336 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
KCNIP3-204ENST00000461336 CLTCL1P53675 1640 aa17.98■□□□□ 0.47
KCNIP3-204ENST00000461336 NAIPQ13075 1403 aa17.98■□□□□ 0.47
KCNIP3-204ENST00000461336 COL22A1Q8NFW1 1626 aaPredicted RBP17.97■□□□□ 0.47
KCNIP3-204ENST00000461336 BCL9LQ86UU0 1499 aa17.96■□□□□ 0.47
KCNIP3-204ENST00000461336 SOS2Q07890 1332 aaPredicted RBP17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms