RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 NWD1Q149M9 1564 aa12.88□□□□□ -0.35
PDGFRA-202ENST00000461294 KDM5AP29375 1690 aaKnown RBP12.88□□□□□ -0.35
PDGFRA-202ENST00000461294 EP400Q96L91 3159 aa12.87□□□□□ -0.35
PDGFRA-202ENST00000461294 DIP2AQ14689 1571 aa12.87□□□□□ -0.35
PDGFRA-202ENST00000461294 RSPH4AQ5TD94 716 aa12.85□□□□□ -0.35
PDGFRA-202ENST00000461294 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
PDGFRA-202ENST00000461294 NCOA3Q9Y6Q9 1424 aa12.85□□□□□ -0.35
PDGFRA-202ENST00000461294 CAMSAP2Q08AD1 1489 aa12.85□□□□□ -0.35
PDGFRA-202ENST00000461294 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
PDGFRA-202ENST00000461294 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.35
PDGFRA-202ENST00000461294 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
PDGFRA-202ENST00000461294 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
PDGFRA-202ENST00000461294 ATF3P18847 181 aa12.82□□□□□ -0.36
PDGFRA-202ENST00000461294 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
PDGFRA-202ENST00000461294 PIK3C2BO00750 1634 aa12.81□□□□□ -0.36
PDGFRA-202ENST00000461294 BRINP3Q76B58 766 aa12.81□□□□□ -0.36
PDGFRA-202ENST00000461294 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
PDGFRA-202ENST00000461294 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
PDGFRA-202ENST00000461294 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
PDGFRA-202ENST00000461294 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.8□□□□□ -0.36
PDGFRA-202ENST00000461294 YY1P25490 414 aa12.8□□□□□ -0.36
PDGFRA-202ENST00000461294 BCANQ96GW7 911 aa12.79□□□□□ -0.36
PDGFRA-202ENST00000461294 USP21Q9UK80 565 aa12.79□□□□□ -0.36
PDGFRA-202ENST00000461294 CEP152O94986 1710 aa12.79□□□□□ -0.36
PDGFRA-202ENST00000461294 ARHGAP31Q2M1Z3 1444 aa12.79□□□□□ -0.36
PDGFRA-202ENST00000461294 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
PDGFRA-202ENST00000461294 EFCAB6Q5THR3 1501 aa12.78□□□□□ -0.36
PDGFRA-202ENST00000461294 PPARGC1BQ86YN6 1023 aaKnown RBP12.78□□□□□ -0.36
PDGFRA-202ENST00000461294 TSPY4P0CV99 314 aa12.77□□□□□ -0.37
PDGFRA-202ENST00000461294 TSPY10P0CW01 314 aa12.77□□□□□ -0.37
PDGFRA-202ENST00000461294 MAST1Q9Y2H9 1570 aa12.77□□□□□ -0.37
PDGFRA-202ENST00000461294 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.37
PDGFRA-202ENST00000461294 ADAMTS2O95450 1211 aa12.76□□□□□ -0.37
PDGFRA-202ENST00000461294 HRCP23327 699 aa12.76□□□□□ -0.37
PDGFRA-202ENST00000461294 IDI1Q13907 227 aa12.76□□□□□ -0.37
PDGFRA-202ENST00000461294 BLMP54132 1417 aaPredicted RBP12.76□□□□□ -0.37
PDGFRA-202ENST00000461294 NHSL1Q5SYE7 1610 aa12.76□□□□□ -0.37
PDGFRA-202ENST00000461294 DEFB132Q7Z7B7 95 aa12.75□□□□□ -0.37
PDGFRA-202ENST00000461294 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
PDGFRA-202ENST00000461294 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
PDGFRA-202ENST00000461294 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
PDGFRA-202ENST00000461294 ATRNO75882 1429 aa12.73□□□□□ -0.37
PDGFRA-202ENST00000461294 TBX22Q9Y458 520 aa12.73□□□□□ -0.37
PDGFRA-202ENST00000461294 ASXL1Q8IXJ9 1541 aa12.72□□□□□ -0.37
PDGFRA-202ENST00000461294 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.37
PDGFRA-202ENST00000461294 SF3B2Q13435 895 aaKnown RBP12.71□□□□□ -0.37
PDGFRA-202ENST00000461294 PLEKHG1Q9ULL1 1385 aa12.69□□□□□ -0.38
PDGFRA-202ENST00000461294 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
PDGFRA-202ENST00000461294 HDGFP51858 240 aaKnown RBP12.69□□□□□ -0.38
PDGFRA-202ENST00000461294 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
PDGFRA-202ENST00000461294 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
PDGFRA-202ENST00000461294 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
PDGFRA-202ENST00000461294 PPP1R15AO75807 674 aaPredicted RBP12.68□□□□□ -0.38
PDGFRA-202ENST00000461294 DCCP43146 1447 aa12.68□□□□□ -0.38
PDGFRA-202ENST00000461294 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
PDGFRA-202ENST00000461294 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
PDGFRA-202ENST00000461294 PTCH1Q13635 1447 aa12.66□□□□□ -0.38
PDGFRA-202ENST00000461294 SLC52A1Q9NWF4 448 aa12.66□□□□□ -0.38
PDGFRA-202ENST00000461294 MST1RQ04912 1400 aa12.65□□□□□ -0.38
PDGFRA-202ENST00000461294 ADGRB3O60242 1522 aa12.65□□□□□ -0.38
PDGFRA-202ENST00000461294 PIK3R4Q99570 1358 aa12.65□□□□□ -0.38
PDGFRA-202ENST00000461294 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
PDGFRA-202ENST00000461294 UNC13BO14795 1591 aa12.63□□□□□ -0.39
PDGFRA-202ENST00000461294 PTPN23Q9H3S7 1636 aa12.62□□□□□ -0.39
PDGFRA-202ENST00000461294 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
PDGFRA-202ENST00000461294 AMOTL2Q9Y2J4 779 aa12.62□□□□□ -0.39
PDGFRA-202ENST00000461294 BRWD3Q6RI45 1802 aa12.62□□□□□ -0.39
PDGFRA-202ENST00000461294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDGFRA-202ENST00000461294 DUOX2Q9NRD8 1548 aa12.61□□□□□ -0.39
PDGFRA-202ENST00000461294 NOS1P29475 1434 aa12.61□□□□□ -0.39
PDGFRA-202ENST00000461294 RIMS2Q9UQ26 1411 aa12.61□□□□□ -0.39
PDGFRA-202ENST00000461294 SPHKAPQ2M3C7 1700 aa12.6□□□□□ -0.39
PDGFRA-202ENST00000461294 BAG6P46379 1132 aa12.6□□□□□ -0.39
PDGFRA-202ENST00000461294 ABCC5O15440 1437 aa12.6□□□□□ -0.39
PDGFRA-202ENST00000461294 DAPK1P53355 1430 aa12.6□□□□□ -0.39
PDGFRA-202ENST00000461294 ADAMTS13Q76LX8 1427 aa12.6□□□□□ -0.39
PDGFRA-202ENST00000461294 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
PDGFRA-202ENST00000461294 SOS2Q07890 1332 aaPredicted RBP12.6□□□□□ -0.39
PDGFRA-202ENST00000461294 KANK1Q14678 1352 aa12.59□□□□□ -0.39
PDGFRA-202ENST00000461294 DCAF8L1A6NGE4 600 aa12.59□□□□□ -0.39
PDGFRA-202ENST00000461294 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDGFRA-202ENST00000461294 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
PDGFRA-202ENST00000461294 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
PDGFRA-202ENST00000461294 LAMC1P11047 1609 aa12.57□□□□□ -0.4
PDGFRA-202ENST00000461294 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
PDGFRA-202ENST00000461294 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
PDGFRA-202ENST00000461294 PTPRUQ92729 1446 aa12.56□□□□□ -0.4
PDGFRA-202ENST00000461294 ITGAEP38570 1179 aa12.56□□□□□ -0.4
PDGFRA-202ENST00000461294 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
PDGFRA-202ENST00000461294 LMTK2Q8IWU2 1503 aa12.56□□□□□ -0.4
PDGFRA-202ENST00000461294 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
PDGFRA-202ENST00000461294 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.55□□□□□ -0.4
PDGFRA-202ENST00000461294 UNC5CLQ8IV45 518 aa12.55□□□□□ -0.4
PDGFRA-202ENST00000461294 SEPT12Q8IYM1 358 aa12.55□□□□□ -0.4
PDGFRA-202ENST00000461294 TRPM2O94759 1503 aa12.55□□□□□ -0.4
PDGFRA-202ENST00000461294 GLI3P10071 1580 aa12.55□□□□□ -0.4
PDGFRA-202ENST00000461294 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
PDGFRA-202ENST00000461294 ERBINQ96RT1 1412 aa12.54□□□□□ -0.4
PDGFRA-202ENST00000461294 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
PDGFRA-202ENST00000461294 ZNF784Q8NCA9 323 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms