RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 SCAF11Q99590 1463 aaKnown RBP12.09□□□□□ -0.47
SND1-202ENST00000461056 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
SND1-202ENST00000461056 CCDC144AA2RUR9 1427 aa12.09□□□□□ -0.47
SND1-202ENST00000461056 NEXMIFQ5QGS0 1516 aa12.08□□□□□ -0.48
SND1-202ENST00000461056 CFAP65Q6ZU64 1925 aaKnown RBP12.08□□□□□ -0.48
SND1-202ENST00000461056 RIMS2Q9UQ26 1411 aa12.08□□□□□ -0.48
SND1-202ENST00000461056 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
SND1-202ENST00000461056 DCAF8L1A6NGE4 600 aa12.07□□□□□ -0.48
SND1-202ENST00000461056 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
SND1-202ENST00000461056 NPHP4O75161 1426 aaPredicted RBP12.05□□□□□ -0.48
SND1-202ENST00000461056 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
SND1-202ENST00000461056 NRXN1Q9ULB1 1477 aa12.04□□□□□ -0.48
SND1-202ENST00000461056 ANKLE2Q86XL3 938 aa12.04□□□□□ -0.48
SND1-202ENST00000461056 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
SND1-202ENST00000461056 MYO5BQ9ULV0 1848 aa12.03□□□□□ -0.48
SND1-202ENST00000461056 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
SND1-202ENST00000461056 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
SND1-202ENST00000461056 NRXN3Q9Y4C0 1643 aa12.02□□□□□ -0.49
SND1-202ENST00000461056 TXNDC2Q86VQ3 553 aa12.02□□□□□ -0.49
SND1-202ENST00000461056 RPGRIP1LQ68CZ1 1315 aa12.02□□□□□ -0.49
SND1-202ENST00000461056 MYOM2P54296 1465 aa12.01□□□□□ -0.49
SND1-202ENST00000461056 LTBP4Q8N2S1 1624 aa12□□□□□ -0.49
SND1-202ENST00000461056 IQGAP1P46940 1657 aa12□□□□□ -0.49
SND1-202ENST00000461056 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
SND1-202ENST00000461056 IFT172Q9UG01 1749 aa12□□□□□ -0.49
SND1-202ENST00000461056 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
SND1-202ENST00000461056 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.99□□□□□ -0.49
SND1-202ENST00000461056 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
SND1-202ENST00000461056 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
SND1-202ENST00000461056 KIF1BO60333 1816 aa11.98□□□□□ -0.49
SND1-202ENST00000461056 PPLO60437 1756 aa11.98□□□□□ -0.49
SND1-202ENST00000461056 ADGRF5Q8IZF2 1346 aa11.98□□□□□ -0.49
SND1-202ENST00000461056 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
SND1-202ENST00000461056 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
SND1-202ENST00000461056 PRAG1Q86YV5 1406 aa11.97□□□□□ -0.49
SND1-202ENST00000461056 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
SND1-202ENST00000461056 NWD1Q149M9 1564 aa11.96□□□□□ -0.49
SND1-202ENST00000461056 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.49
SND1-202ENST00000461056 ZNF335Q9H4Z2 1342 aaPredicted RBP11.96□□□□□ -0.49
SND1-202ENST00000461056 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
SND1-202ENST00000461056 SETD1AO15047 1707 aaKnown RBP11.96□□□□□ -0.49
SND1-202ENST00000461056 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
SND1-202ENST00000461056 TBX22Q9Y458 520 aa11.95□□□□□ -0.5
SND1-202ENST00000461056 METP08581 1390 aa11.94□□□□□ -0.5
SND1-202ENST00000461056 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
SND1-202ENST00000461056 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
SND1-202ENST00000461056 RGL3Q3MIN7 710 aa11.94□□□□□ -0.5
SND1-202ENST00000461056 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
SND1-202ENST00000461056 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
SND1-202ENST00000461056 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
SND1-202ENST00000461056 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
SND1-202ENST00000461056 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
SND1-202ENST00000461056 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
SND1-202ENST00000461056 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
SND1-202ENST00000461056 PPP1R15AO75807 674 aaPredicted RBP11.91□□□□□ -0.5
SND1-202ENST00000461056 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
SND1-202ENST00000461056 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
SND1-202ENST00000461056 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
SND1-202ENST00000461056 NKTRP30414 1462 aaKnown RBP11.9□□□□□ -0.5
SND1-202ENST00000461056 TECPR2O15040 1411 aa11.9□□□□□ -0.5
SND1-202ENST00000461056 KCNA6P17658 529 aa11.9□□□□□ -0.5
SND1-202ENST00000461056 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
SND1-202ENST00000461056 CPS1P31327 1500 aa11.9□□□□□ -0.5
SND1-202ENST00000461056 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
SND1-202ENST00000461056 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
SND1-202ENST00000461056 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
SND1-202ENST00000461056 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
SND1-202ENST00000461056 PTCH1Q13635 1447 aa11.87□□□□□ -0.51
SND1-202ENST00000461056 LRPPRCP42704 1394 aaKnown RBP11.87□□□□□ -0.51
SND1-202ENST00000461056 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
SND1-202ENST00000461056 CFAP70Q5T0N1 1121 aa11.86□□□□□ -0.51
SND1-202ENST00000461056 ABCC11Q96J66 1382 aa11.86□□□□□ -0.51
SND1-202ENST00000461056 ROBO2Q9HCK4 1378 aa11.86□□□□□ -0.51
SND1-202ENST00000461056 LAMC1P11047 1609 aa11.86□□□□□ -0.51
SND1-202ENST00000461056 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
SND1-202ENST00000461056 TMEM94Q12767 1356 aa11.84□□□□□ -0.51
SND1-202ENST00000461056 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
SND1-202ENST00000461056 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
SND1-202ENST00000461056 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
SND1-202ENST00000461056 YTHDC2Q9H6S0 1430 aaKnown RBP11.84□□□□□ -0.51
SND1-202ENST00000461056 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
SND1-202ENST00000461056 NCOA3Q9Y6Q9 1424 aa11.83□□□□□ -0.52
SND1-202ENST00000461056 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
SND1-202ENST00000461056 DLC1Q96QB1 1528 aa11.82□□□□□ -0.52
SND1-202ENST00000461056 TMEM132EQ6IEE7 984 aa11.82□□□□□ -0.52
SND1-202ENST00000461056 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
SND1-202ENST00000461056 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
SND1-202ENST00000461056 XIRP1Q702N8 1843 aaKnown RBP11.81□□□□□ -0.52
SND1-202ENST00000461056 TONSLQ96HA7 1378 aa11.81□□□□□ -0.52
SND1-202ENST00000461056 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
SND1-202ENST00000461056 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
SND1-202ENST00000461056 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
SND1-202ENST00000461056 CCER1Q8TC90 406 aaPredicted RBP11.81□□□□□ -0.52
SND1-202ENST00000461056 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
SND1-202ENST00000461056 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
SND1-202ENST00000461056 SIRT1Q96EB6 747 aa11.8□□□□□ -0.52
SND1-202ENST00000461056 BCANQ96GW7 911 aa11.8□□□□□ -0.52
SND1-202ENST00000461056 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
SND1-202ENST00000461056 KCNA4P22459 653 aa11.79□□□□□ -0.52
SND1-202ENST00000461056 ADGRL3Q9HAR2 1447 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms