RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TJAP1Q5JTD0 557 aa6.03□□□□□ -1.44
HPS3-203ENST00000460822 GPIHBP1Q8IV16 184 aa6.02□□□□□ -1.45
HPS3-203ENST00000460822 SLF2Q8IX21 1173 aa6.02□□□□□ -1.45
HPS3-203ENST00000460822 C3orf80F5H4A9 247 aa6.02□□□□□ -1.45
HPS3-203ENST00000460822 SWT1Q5T5J6 900 aaKnown RBP6.02□□□□□ -1.45
HPS3-203ENST00000460822 TIMELESSQ9UNS1 1208 aa6.02□□□□□ -1.45
HPS3-203ENST00000460822 GNPATO15228 680 aa6.01□□□□□ -1.45
HPS3-203ENST00000460822 OATP04181 439 aa6.01□□□□□ -1.45
HPS3-203ENST00000460822 DNAJB2P25686 324 aa6.01□□□□□ -1.45
HPS3-203ENST00000460822 EYA1Q99502 592 aa6.01□□□□□ -1.45
HPS3-203ENST00000460822 ZNF775Q96BV0 537 aaPredicted RBP6□□□□□ -1.45
HPS3-203ENST00000460822 ADGRG1Q9Y653 693 aa6□□□□□ -1.45
HPS3-203ENST00000460822 PPP1R18Q6NYC8 613 aa5.99□□□□□ -1.45
HPS3-203ENST00000460822 IL21Q9HBE4 155 aa5.99□□□□□ -1.45
HPS3-203ENST00000460822 FAM161AQ3B820 660 aa5.98□□□□□ -1.45
HPS3-203ENST00000460822 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.98□□□□□ -1.45
HPS3-203ENST00000460822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.98□□□□□ -1.45
HPS3-203ENST00000460822 RCCD1A6NED2 376 aa5.98□□□□□ -1.45
HPS3-203ENST00000460822 PRR14Q9BWN1 585 aa5.98□□□□□ -1.45
HPS3-203ENST00000460822 GTF3C3Q9Y5Q9 886 aa5.98□□□□□ -1.45
HPS3-203ENST00000460822 RSPH4AQ5TD94 716 aa5.97□□□□□ -1.45
HPS3-203ENST00000460822 PDZRN3Q9UPQ7 1066 aa5.97□□□□□ -1.45
HPS3-203ENST00000460822 TMEM134Q9H6X4 195 aa5.96□□□□□ -1.46
HPS3-203ENST00000460822 KMT5BQ4FZB7 885 aa5.95□□□□□ -1.46
HPS3-203ENST00000460822 PXYLP1Q8TE99 480 aa5.95□□□□□ -1.46
HPS3-203ENST00000460822 MTRQ99707 1265 aa5.95□□□□□ -1.46
HPS3-203ENST00000460822 FECHP22830 423 aa5.95□□□□□ -1.46
HPS3-203ENST00000460822 GPR37O15354 613 aa5.94□□□□□ -1.46
HPS3-203ENST00000460822 METTL3Q86U44 580 aaKnown RBP5.94□□□□□ -1.46
HPS3-203ENST00000460822 APLP1P51693 650 aa5.93□□□□□ -1.46
HPS3-203ENST00000460822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.93□□□□□ -1.46
HPS3-203ENST00000460822 TMEM132AQ24JP5 1023 aa5.92□□□□□ -1.46
HPS3-203ENST00000460822 LMOD2Q6P5Q4 547 aa5.92□□□□□ -1.46
HPS3-203ENST00000460822 TMUB1Q9BVT8 246 aa5.92□□□□□ -1.46
HPS3-203ENST00000460822 PCDHB3Q9Y5E6 796 aa5.92□□□□□ -1.46
HPS3-203ENST00000460822 MAP2K5Q13163 448 aa5.91□□□□□ -1.46
HPS3-203ENST00000460822 RDH13Q8NBN7 331 aa5.91□□□□□ -1.46
HPS3-203ENST00000460822 ZNF516Q92618 1163 aa5.91□□□□□ -1.46
HPS3-203ENST00000460822 DAXXQ9UER7 740 aaPredicted RBP5.91□□□□□ -1.46
HPS3-203ENST00000460822 CFHP08603 1231 aa5.91□□□□□ -1.46
HPS3-203ENST00000460822 GGCXP38435 758 aa5.91□□□□□ -1.46
HPS3-203ENST00000460822 COPS2P61201 443 aa5.91□□□□□ -1.46
HPS3-203ENST00000460822 KRI1Q8N9T8 703 aaKnown RBP5.91□□□□□ -1.46
HPS3-203ENST00000460822 MINK1Q8N4C8 1332 aaPredicted RBP5.9□□□□□ -1.46
HPS3-203ENST00000460822 SULF1Q8IWU6 871 aa5.9□□□□□ -1.46
HPS3-203ENST00000460822 DDX11L8A8MPP1 907 aa5.89□□□□□ -1.47
HPS3-203ENST00000460822 DGAT1O75907 488 aa5.89□□□□□ -1.47
HPS3-203ENST00000460822 IRF6O14896 467 aa5.88□□□□□ -1.47
HPS3-203ENST00000460822 ACTN4O43707 911 aaKnown RBP5.88□□□□□ -1.47
HPS3-203ENST00000460822 SLC10A3P09131 477 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 MYT1Q01538 1121 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 ERICH6Q7L0X2 663 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 NKX2-3Q8TAU0 364 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 NR1I2O75469 434 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 BLOC1S3Q6QNY0 202 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 TRIM67Q6ZTA4 783 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 NLRP7Q8WX94 980 aa5.87□□□□□ -1.47
HPS3-203ENST00000460822 ZPR1O75312 459 aa5.86□□□□□ -1.47
HPS3-203ENST00000460822 TREML4Q6UXN2 200 aa5.86□□□□□ -1.47
HPS3-203ENST00000460822 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
HPS3-203ENST00000460822 CCDC102AQ96A19 550 aa5.86□□□□□ -1.47
HPS3-203ENST00000460822 PRR20EP86478 221 aa5.85□□□□□ -1.47
HPS3-203ENST00000460822 PRR20CP86479 221 aa5.85□□□□□ -1.47
HPS3-203ENST00000460822 PRR20DP86480 221 aa5.85□□□□□ -1.47
HPS3-203ENST00000460822 PRR20BP86481 221 aa5.85□□□□□ -1.47
HPS3-203ENST00000460822 PRR20AP86496 221 aa5.85□□□□□ -1.47
HPS3-203ENST00000460822 PKDCCQ504Y2 493 aa5.85□□□□□ -1.47
HPS3-203ENST00000460822 SLC19A1P41440 591 aa5.84□□□□□ -1.47
HPS3-203ENST00000460822 MDM2Q00987 491 aaPredicted RBP5.84□□□□□ -1.47
HPS3-203ENST00000460822 GRIPAP1Q4V328 841 aa5.84□□□□□ -1.47
HPS3-203ENST00000460822 PHOX2BQ99453 314 aa5.84□□□□□ -1.47
HPS3-203ENST00000460822 POTECB2RU33 542 aa5.84□□□□□ -1.48
HPS3-203ENST00000460822 CLCN1P35523 988 aa5.84□□□□□ -1.48
HPS3-203ENST00000460822 ZC3H15Q8WU90 426 aaKnown RBP5.84□□□□□ -1.48
HPS3-203ENST00000460822 BRPF1P55201 1214 aaPredicted RBP5.83□□□□□ -1.48
HPS3-203ENST00000460822 BARGINQ6ZT62 677 aa5.83□□□□□ -1.48
HPS3-203ENST00000460822 ATP6V1AP38606 617 aa5.82□□□□□ -1.48
HPS3-203ENST00000460822 GCGRP47871 477 aa5.82□□□□□ -1.48
HPS3-203ENST00000460822 PUS10Q3MIT2 529 aaKnown RBP5.82□□□□□ -1.48
HPS3-203ENST00000460822 SPRYD7Q5W111 196 aa5.82□□□□□ -1.48
HPS3-203ENST00000460822 C14orf37Q86TY3 774 aa5.82□□□□□ -1.48
HPS3-203ENST00000460822 ZNF598Q86UK7 904 aaKnown RBP5.82□□□□□ -1.48
HPS3-203ENST00000460822 ZMYND10O75800 440 aa5.82□□□□□ -1.48
HPS3-203ENST00000460822 EMID1Q96A84 441 aaPredicted RBP5.82□□□□□ -1.48
HPS3-203ENST00000460822 GPCPD1Q9NPB8 672 aa5.82□□□□□ -1.48
HPS3-203ENST00000460822 SCUBE3Q8IX30 993 aa5.81□□□□□ -1.48
HPS3-203ENST00000460822 ADH1BP00325 375 aa5.8□□□□□ -1.48
HPS3-203ENST00000460822 FUT2Q10981 343 aa5.8□□□□□ -1.48
HPS3-203ENST00000460822 RNF223E7ERA6 249 aa5.8□□□□□ -1.48
HPS3-203ENST00000460822 TLL1O43897 1013 aa5.8□□□□□ -1.48
HPS3-203ENST00000460822 CD46P15529 392 aa5.8□□□□□ -1.48
HPS3-203ENST00000460822 TTLL12Q14166 644 aaPredicted RBP5.8□□□□□ -1.48
HPS3-203ENST00000460822 ARXQ96QS3 562 aa5.8□□□□□ -1.48
HPS3-203ENST00000460822 SPSB2Q99619 263 aa5.79□□□□□ -1.48
HPS3-203ENST00000460822 SLC6A16Q9GZN6 736 aa5.79□□□□□ -1.48
HPS3-203ENST00000460822 KDM4AO75164 1064 aa5.78□□□□□ -1.48
HPS3-203ENST00000460822 FMNL1O95466 1100 aaPredicted RBP5.78□□□□□ -1.48
HPS3-203ENST00000460822 NEUROD2Q15784 382 aa5.78□□□□□ -1.48
HPS3-203ENST00000460822 MORN1Q5T089 497 aa5.78□□□□□ -1.48
HPS3-203ENST00000460822 NUTM1Q86Y26 1132 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms