RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 VGFO15240 615 aaPredicted RBP15.49■□□□□ 0.07
CSDC2-202ENST00000460790 UBR1Q8IWV7 1749 aa15.48■□□□□ 0.07
CSDC2-202ENST00000460790 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
CSDC2-202ENST00000460790 NRXN1Q9ULB1 1477 aa15.48■□□□□ 0.07
CSDC2-202ENST00000460790 TRPM1Q7Z4N2 1603 aa15.48■□□□□ 0.07
CSDC2-202ENST00000460790 ZFYVE9O95405 1425 aa15.48■□□□□ 0.07
CSDC2-202ENST00000460790 RALGAPBQ86X10 1494 aa15.47■□□□□ 0.07
CSDC2-202ENST00000460790 KDM4FA0A1W2PPD8 638 aa15.45■□□□□ 0.06
CSDC2-202ENST00000460790 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
CSDC2-202ENST00000460790 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
CSDC2-202ENST00000460790 MYO3AQ8NEV4 1616 aa15.45■□□□□ 0.06
CSDC2-202ENST00000460790 KIAA1210Q9ULL0 1709 aa15.45■□□□□ 0.06
CSDC2-202ENST00000460790 RIMS2Q9UQ26 1411 aa15.44■□□□□ 0.06
CSDC2-202ENST00000460790 NBPF1Q3BBV0 1214 aa15.44■□□□□ 0.06
CSDC2-202ENST00000460790 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
CSDC2-202ENST00000460790 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.44■□□□□ 0.06
CSDC2-202ENST00000460790 THEMISQ8N1K5 641 aaPredicted RBP15.43■□□□□ 0.06
CSDC2-202ENST00000460790 TMEM2Q9UHN6 1383 aa15.43■□□□□ 0.06
CSDC2-202ENST00000460790 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
CSDC2-202ENST00000460790 ROCK2O75116 1388 aaKnown RBP15.42■□□□□ 0.06
CSDC2-202ENST00000460790 GPRASP1Q5JY77 1395 aa15.42■□□□□ 0.06
CSDC2-202ENST00000460790 EIF4G2P78344 907 aaKnown RBP eCLIP15.42■□□□□ 0.06
CSDC2-202ENST00000460790 CFAP70Q5T0N1 1121 aa15.42■□□□□ 0.06
CSDC2-202ENST00000460790 CARD11Q9BXL7 1154 aa15.42■□□□□ 0.06
CSDC2-202ENST00000460790 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
CSDC2-202ENST00000460790 CEP170BQ9Y4F5 1589 aaPredicted RBP15.41■□□□□ 0.06
CSDC2-202ENST00000460790 HSPA5P11021 654 aaKnown RBP15.4■□□□□ 0.06
CSDC2-202ENST00000460790 ZNF142P52746 1687 aaPredicted RBP15.4■□□□□ 0.06
CSDC2-202ENST00000460790 LAMC1P11047 1609 aa15.39■□□□□ 0.05
CSDC2-202ENST00000460790 SLIT1O75093 1534 aa15.39■□□□□ 0.05
CSDC2-202ENST00000460790 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
CSDC2-202ENST00000460790 LTKP29376 864 aa15.37■□□□□ 0.05
CSDC2-202ENST00000460790 TXNDC2Q86VQ3 553 aa15.37■□□□□ 0.05
CSDC2-202ENST00000460790 HIRIP3Q9BW71 556 aaPredicted RBP15.37■□□□□ 0.05
CSDC2-202ENST00000460790 EID1Q9Y6B2 187 aa15.37■□□□□ 0.05
CSDC2-202ENST00000460790 USP47Q96K76 1375 aa15.36■□□□□ 0.05
CSDC2-202ENST00000460790 SETBP1Q9Y6X0 1596 aa15.36■□□□□ 0.05
CSDC2-202ENST00000460790 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
CSDC2-202ENST00000460790 IQGAP1P46940 1657 aa15.33■□□□□ 0.04
CSDC2-202ENST00000460790 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
CSDC2-202ENST00000460790 ADGRB1O14514 1584 aa15.32■□□□□ 0.04
CSDC2-202ENST00000460790 NRXN3Q9Y4C0 1643 aa15.32■□□□□ 0.04
CSDC2-202ENST00000460790 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
CSDC2-202ENST00000460790 TMEM132EQ6IEE7 984 aa15.32■□□□□ 0.04
CSDC2-202ENST00000460790 SCAF11Q99590 1463 aaKnown RBP15.32■□□□□ 0.04
CSDC2-202ENST00000460790 ANKLE2Q86XL3 938 aa15.31■□□□□ 0.04
CSDC2-202ENST00000460790 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
CSDC2-202ENST00000460790 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
CSDC2-202ENST00000460790 BCANQ96GW7 911 aa15.29■□□□□ 0.04
CSDC2-202ENST00000460790 ASXL1Q8IXJ9 1541 aa15.28■□□□□ 0.04
CSDC2-202ENST00000460790 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
CSDC2-202ENST00000460790 MED14O60244 1454 aa15.27■□□□□ 0.04
CSDC2-202ENST00000460790 C11orf95C9JLR9 678 aaPredicted RBP15.27■□□□□ 0.04
CSDC2-202ENST00000460790 TBX22Q9Y458 520 aa15.27■□□□□ 0.04
CSDC2-202ENST00000460790 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
CSDC2-202ENST00000460790 TESK2Q96S53 571 aa15.26■□□□□ 0.03
CSDC2-202ENST00000460790 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
CSDC2-202ENST00000460790 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
CSDC2-202ENST00000460790 POLR1AO95602 1720 aaPredicted RBP15.25■□□□□ 0.03
CSDC2-202ENST00000460790 METP08581 1390 aa15.24■□□□□ 0.03
CSDC2-202ENST00000460790 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
CSDC2-202ENST00000460790 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
CSDC2-202ENST00000460790 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
CSDC2-202ENST00000460790 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
CSDC2-202ENST00000460790 STK26Q9P289 416 aa15.23■□□□□ 0.03
CSDC2-202ENST00000460790 ABCC11Q96J66 1382 aa15.23■□□□□ 0.03
CSDC2-202ENST00000460790 WASHC2AQ641Q2 1341 aa15.22■□□□□ 0.03
CSDC2-202ENST00000460790 DIP2AQ14689 1571 aa15.22■□□□□ 0.03
CSDC2-202ENST00000460790 LMTK3Q96Q04 1460 aa15.21■□□□□ 0.03
CSDC2-202ENST00000460790 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.03
CSDC2-202ENST00000460790 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.03
CSDC2-202ENST00000460790 SIRT1Q96EB6 747 aa15.21■□□□□ 0.03
CSDC2-202ENST00000460790 CCDC7Q96M83 1385 aa15.21■□□□□ 0.02
CSDC2-202ENST00000460790 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
CSDC2-202ENST00000460790 TMF1P82094 1093 aa15.2■□□□□ 0.02
CSDC2-202ENST00000460790 DLC1Q96QB1 1528 aa15.2■□□□□ 0.02
CSDC2-202ENST00000460790 NPHP4O75161 1426 aaPredicted RBP15.19■□□□□ 0.02
CSDC2-202ENST00000460790 HSPA2P54652 639 aa15.19■□□□□ 0.02
CSDC2-202ENST00000460790 KNDC1Q76NI1 1749 aa15.19■□□□□ 0.02
CSDC2-202ENST00000460790 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
CSDC2-202ENST00000460790 SBNO2Q9Y2G9 1366 aa15.19■□□□□ 0.02
CSDC2-202ENST00000460790 TECPR2O15040 1411 aa15.18■□□□□ 0.02
CSDC2-202ENST00000460790 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
CSDC2-202ENST00000460790 DIEXFQ68CQ4 756 aaKnown RBP15.18■□□□□ 0.02
CSDC2-202ENST00000460790 QRICH2Q9H0J4 1663 aa15.18■□□□□ 0.02
CSDC2-202ENST00000460790 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
CSDC2-202ENST00000460790 PRAM1Q96QH2 718 aa15.17■□□□□ 0.02
CSDC2-202ENST00000460790 POGKQ9P215 609 aa15.17■□□□□ 0.02
CSDC2-202ENST00000460790 CHD2O14647 1828 aaKnown RBP15.17■□□□□ 0.02
CSDC2-202ENST00000460790 DISP3Q9P2K9 1392 aa15.16■□□□□ 0.02
CSDC2-202ENST00000460790 AMOTL2Q9Y2J4 779 aa15.16■□□□□ 0.02
CSDC2-202ENST00000460790 FAM135BQ49AJ0 1406 aa15.16■□□□□ 0.02
CSDC2-202ENST00000460790 CDCA8Q53HL2 280 aa15.15■□□□□ 0.02
CSDC2-202ENST00000460790 WAPLQ7Z5K2 1190 aa15.15■□□□□ 0.02
CSDC2-202ENST00000460790 STRCQ7RTU9 1775 aa15.14■□□□□ 0.01
CSDC2-202ENST00000460790 CPS1P31327 1500 aa15.14■□□□□ 0.01
CSDC2-202ENST00000460790 SAFB2Q14151 953 aaKnown RBP eCLIP15.13■□□□□ 0.01
CSDC2-202ENST00000460790 ROBO2Q9HCK4 1378 aa15.12■□□□□ 0.01
CSDC2-202ENST00000460790 PLEKHH1Q9ULM0 1364 aa15.12■□□□□ 0.01
CSDC2-202ENST00000460790 XRN1Q8IZH2 1706 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms