RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
PCYT1A-212ENST00000460677 ADGRF5Q8IZF2 1346 aa22.3■■□□□ 1.16
PCYT1A-212ENST00000460677 NEXMIFQ5QGS0 1516 aa22.29■■□□□ 1.16
PCYT1A-212ENST00000460677 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
PCYT1A-212ENST00000460677 C3P01024 1663 aa22.28■■□□□ 1.16
PCYT1A-212ENST00000460677 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
PCYT1A-212ENST00000460677 MYO5BQ9ULV0 1848 aa22.27■■□□□ 1.15
PCYT1A-212ENST00000460677 VGFO15240 615 aaPredicted RBP22.26■■□□□ 1.15
PCYT1A-212ENST00000460677 ZFYVE9O95405 1425 aa22.25■■□□□ 1.15
PCYT1A-212ENST00000460677 A2ML1A8K2U0 1454 aa22.25■■□□□ 1.15
PCYT1A-212ENST00000460677 CEBPAP49715 358 aaPredicted RBP22.25■■□□□ 1.15
PCYT1A-212ENST00000460677 PIK3C2GO75747 1445 aa22.24■■□□□ 1.15
PCYT1A-212ENST00000460677 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
PCYT1A-212ENST00000460677 NLRP1Q9C000 1473 aa22.21■■□□□ 1.15
PCYT1A-212ENST00000460677 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
PCYT1A-212ENST00000460677 KDM5AP29375 1690 aaKnown RBP22.21■■□□□ 1.15
PCYT1A-212ENST00000460677 RIMS1Q86UR5 1692 aaKnown RBP22.19■■□□□ 1.14
PCYT1A-212ENST00000460677 C14orf93Q9H972 538 aaKnown RBP22.19■■□□□ 1.14
PCYT1A-212ENST00000460677 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
PCYT1A-212ENST00000460677 NUTM2DQ5VT03 806 aaPredicted RBP22.18■■□□□ 1.14
PCYT1A-212ENST00000460677 SETBP1Q9Y6X0 1596 aa22.17■■□□□ 1.14
PCYT1A-212ENST00000460677 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
PCYT1A-212ENST00000460677 SCAF11Q99590 1463 aaKnown RBP22.16■■□□□ 1.14
PCYT1A-212ENST00000460677 RIMS2Q9UQ26 1411 aa22.16■■□□□ 1.14
PCYT1A-212ENST00000460677 IQGAP1P46940 1657 aa22.16■■□□□ 1.14
PCYT1A-212ENST00000460677 C11orf95C9JLR9 678 aaPredicted RBP22.15■■□□□ 1.14
PCYT1A-212ENST00000460677 DDX10Q13206 875 aaKnown RBP22.15■■□□□ 1.14
PCYT1A-212ENST00000460677 UBR1Q8IWV7 1749 aa22.14■■□□□ 1.14
PCYT1A-212ENST00000460677 CCDC7Q96M83 1385 aa22.14■■□□□ 1.13
PCYT1A-212ENST00000460677 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
PCYT1A-212ENST00000460677 POLR1AO95602 1720 aaPredicted RBP22.13■■□□□ 1.13
PCYT1A-212ENST00000460677 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.12■■□□□ 1.13
PCYT1A-212ENST00000460677 HDGFP51858 240 aaKnown RBP22.12■■□□□ 1.13
PCYT1A-212ENST00000460677 KIF7Q2M1P5 1343 aa22.11■■□□□ 1.13
PCYT1A-212ENST00000460677 ADGRB1O14514 1584 aa22.11■■□□□ 1.13
PCYT1A-212ENST00000460677 EIF3AQ14152 1382 aaKnown RBP22.11■■□□□ 1.13
PCYT1A-212ENST00000460677 TMEM2Q9UHN6 1383 aa22.1■■□□□ 1.13
PCYT1A-212ENST00000460677 MYO3AQ8NEV4 1616 aa22.08■■□□□ 1.13
PCYT1A-212ENST00000460677 TESK2Q96S53 571 aa22.07■■□□□ 1.12
PCYT1A-212ENST00000460677 TMEM132EQ6IEE7 984 aa22.05■■□□□ 1.12
PCYT1A-212ENST00000460677 ALKQ9UM73 1620 aa22.04■■□□□ 1.12
PCYT1A-212ENST00000460677 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
PCYT1A-212ENST00000460677 SLIT1O75093 1534 aa22.03■■□□□ 1.12
PCYT1A-212ENST00000460677 PTPRMP28827 1452 aa22.02■■□□□ 1.12
PCYT1A-212ENST00000460677 ARHGAP23Q9P227 1491 aa22.02■■□□□ 1.12
PCYT1A-212ENST00000460677 TMF1P82094 1093 aa22.01■■□□□ 1.11
PCYT1A-212ENST00000460677 MIER1Q8N108 512 aa22.01■■□□□ 1.11
PCYT1A-212ENST00000460677 ASXL1Q8IXJ9 1541 aa22.01■■□□□ 1.11
PCYT1A-212ENST00000460677 CEP170BQ9Y4F5 1589 aaPredicted RBP22.01■■□□□ 1.11
PCYT1A-212ENST00000460677 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
PCYT1A-212ENST00000460677 TRAK1Q9UPV9 953 aa21.99■■□□□ 1.11
PCYT1A-212ENST00000460677 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
PCYT1A-212ENST00000460677 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
PCYT1A-212ENST00000460677 EID1Q9Y6B2 187 aa21.99■■□□□ 1.11
PCYT1A-212ENST00000460677 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
PCYT1A-212ENST00000460677 DISP3Q9P2K9 1392 aa21.98■■□□□ 1.11
PCYT1A-212ENST00000460677 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
PCYT1A-212ENST00000460677 POLR3GLQ9BT43 218 aa21.98■■□□□ 1.11
PCYT1A-212ENST00000460677 ZNF142P52746 1687 aaPredicted RBP21.97■■□□□ 1.11
PCYT1A-212ENST00000460677 PLEKHG1Q9ULL1 1385 aa21.97■■□□□ 1.11
PCYT1A-212ENST00000460677 CENPJQ9HC77 1338 aaPredicted RBP21.97■■□□□ 1.11
PCYT1A-212ENST00000460677 LTKP29376 864 aa21.97■■□□□ 1.11
PCYT1A-212ENST00000460677 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
PCYT1A-212ENST00000460677 SBNO2Q9Y2G9 1366 aa21.96■■□□□ 1.11
PCYT1A-212ENST00000460677 YTHDC2Q9H6S0 1430 aaKnown RBP21.95■■□□□ 1.1
PCYT1A-212ENST00000460677 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
PCYT1A-212ENST00000460677 CDCA8Q53HL2 280 aa21.93■■□□□ 1.1
PCYT1A-212ENST00000460677 BCANQ96GW7 911 aa21.92■■□□□ 1.1
PCYT1A-212ENST00000460677 STK26Q9P289 416 aa21.91■■□□□ 1.1
PCYT1A-212ENST00000460677 LRPPRCP42704 1394 aaKnown RBP21.91■■□□□ 1.1
PCYT1A-212ENST00000460677 ADAMTS13Q76LX8 1427 aa21.9■■□□□ 1.1
PCYT1A-212ENST00000460677 QRICH2Q9H0J4 1663 aa21.9■■□□□ 1.1
PCYT1A-212ENST00000460677 ANP32CO43423 234 aa21.89■■□□□ 1.1
PCYT1A-212ENST00000460677 METP08581 1390 aa21.89■■□□□ 1.1
PCYT1A-212ENST00000460677 DLC1Q96QB1 1528 aa21.88■■□□□ 1.09
PCYT1A-212ENST00000460677 ABCC11Q96J66 1382 aa21.87■■□□□ 1.09
PCYT1A-212ENST00000460677 MED14O60244 1454 aa21.87■■□□□ 1.09
PCYT1A-212ENST00000460677 ANKLE2Q86XL3 938 aa21.85■■□□□ 1.09
PCYT1A-212ENST00000460677 PRAM1Q96QH2 718 aa21.84■■□□□ 1.09
PCYT1A-212ENST00000460677 POGKQ9P215 609 aa21.84■■□□□ 1.09
PCYT1A-212ENST00000460677 TBX22Q9Y458 520 aa21.84■■□□□ 1.09
PCYT1A-212ENST00000460677 DIP2AQ14689 1571 aa21.83■■□□□ 1.08
PCYT1A-212ENST00000460677 TECPR2O15040 1411 aa21.82■■□□□ 1.08
PCYT1A-212ENST00000460677 KDM4FA0A1W2PPD8 638 aa21.82■■□□□ 1.08
PCYT1A-212ENST00000460677 SIRT1Q96EB6 747 aa21.82■■□□□ 1.08
PCYT1A-212ENST00000460677 KNDC1Q76NI1 1749 aa21.82■■□□□ 1.08
PCYT1A-212ENST00000460677 SLC26A8Q96RN1 970 aa21.81■■□□□ 1.08
PCYT1A-212ENST00000460677 PUS7Q96PZ0 661 aaKnown RBP21.8■■□□□ 1.08
PCYT1A-212ENST00000460677 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
PCYT1A-212ENST00000460677 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.08
PCYT1A-212ENST00000460677 FAM135BQ49AJ0 1406 aa21.79■■□□□ 1.08
PCYT1A-212ENST00000460677 CPS1P31327 1500 aa21.78■■□□□ 1.08
PCYT1A-212ENST00000460677 TULP4Q9NRJ4 1543 aa21.78■■□□□ 1.08
PCYT1A-212ENST00000460677 PANK3Q9H999 370 aa21.76■■□□□ 1.07
PCYT1A-212ENST00000460677 MYOM1P52179 1685 aa21.76■■□□□ 1.07
PCYT1A-212ENST00000460677 WAPLQ7Z5K2 1190 aa21.75■■□□□ 1.07
PCYT1A-212ENST00000460677 PTPRUQ92729 1446 aa21.75■■□□□ 1.07
PCYT1A-212ENST00000460677 PLEKHH1Q9ULM0 1364 aa21.75■■□□□ 1.07
PCYT1A-212ENST00000460677 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
PCYT1A-212ENST00000460677 CCER2I3L3R5 266 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms