RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 STAC3Q96MF2 364 aa19.68■□□□□ 0.74
ERCC3-205ENST00000460485 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
ERCC3-205ENST00000460485 NBPF8Q3BBV2 869 aa19.67■□□□□ 0.74
ERCC3-205ENST00000460485 DHX29Q7Z478 1369 aaKnown RBP19.67■□□□□ 0.74
ERCC3-205ENST00000460485 MROH1Q8NDA8 1641 aa19.66■□□□□ 0.74
ERCC3-205ENST00000460485 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
ERCC3-205ENST00000460485 USP47Q96K76 1375 aa19.65■□□□□ 0.74
ERCC3-205ENST00000460485 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
ERCC3-205ENST00000460485 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
ERCC3-205ENST00000460485 EFCAB6Q5THR3 1501 aa19.63■□□□□ 0.73
ERCC3-205ENST00000460485 ANKLE2Q86XL3 938 aa19.63■□□□□ 0.73
ERCC3-205ENST00000460485 GPRASP1Q5JY77 1395 aa19.62■□□□□ 0.73
ERCC3-205ENST00000460485 YTHDC1Q96MU7 727 aaKnown RBP19.62■□□□□ 0.73
ERCC3-205ENST00000460485 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
ERCC3-205ENST00000460485 KIF1BO60333 1816 aa19.6■□□□□ 0.73
ERCC3-205ENST00000460485 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
ERCC3-205ENST00000460485 THEMISQ8N1K5 641 aaPredicted RBP19.6■□□□□ 0.73
ERCC3-205ENST00000460485 ALKQ9UM73 1620 aa19.58■□□□□ 0.73
ERCC3-205ENST00000460485 MED14O60244 1454 aa19.57■□□□□ 0.72
ERCC3-205ENST00000460485 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
ERCC3-205ENST00000460485 CLTCL1P53675 1640 aa19.57■□□□□ 0.72
ERCC3-205ENST00000460485 TNRQ92752 1358 aa19.57■□□□□ 0.72
ERCC3-205ENST00000460485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.721e-11■■■■□ 21.4
ERCC3-205ENST00000460485 FBXO31Q5XUX0 539 aaPredicted RBP19.54■□□□□ 0.72
ERCC3-205ENST00000460485 RGS17Q9UGC6 210 aaPredicted RBP19.54■□□□□ 0.72
ERCC3-205ENST00000460485 IFT172Q9UG01 1749 aa19.52■□□□□ 0.72
ERCC3-205ENST00000460485 DCAF11Q8TEB1 546 aa19.52■□□□□ 0.72
ERCC3-205ENST00000460485 CARD11Q9BXL7 1154 aa19.52■□□□□ 0.72
ERCC3-205ENST00000460485 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
ERCC3-205ENST00000460485 NPHP4O75161 1426 aaPredicted RBP19.51■□□□□ 0.71
ERCC3-205ENST00000460485 NLRP1Q9C000 1473 aa19.51■□□□□ 0.71
ERCC3-205ENST00000460485 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
ERCC3-205ENST00000460485 MYOM2P54296 1465 aa19.5■□□□□ 0.71
ERCC3-205ENST00000460485 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
ERCC3-205ENST00000460485 LRRC7Q96NW7 1537 aa19.48■□□□□ 0.71
ERCC3-205ENST00000460485 ZNF326Q5BKZ1 582 aaKnown RBP19.48■□□□□ 0.71
ERCC3-205ENST00000460485 GTF3C3Q9Y5Q9 886 aa19.47■□□□□ 0.71
ERCC3-205ENST00000460485 UGGT1Q9NYU2 1555 aa19.47■□□□□ 0.71
ERCC3-205ENST00000460485 WASHC2CQ9Y4E1 1318 aa19.47■□□□□ 0.71
ERCC3-205ENST00000460485 KIF3BO15066 747 aa19.46■□□□□ 0.71
ERCC3-205ENST00000460485 ABCC3O15438 1527 aa19.43■□□□□ 0.7
ERCC3-205ENST00000460485 ADGRB3O60242 1522 aa19.43■□□□□ 0.7
ERCC3-205ENST00000460485 SYNMO15061 1565 aa19.43■□□□□ 0.7
ERCC3-205ENST00000460485 STRCP1A6NGW2 1772 aa19.42■□□□□ 0.7
ERCC3-205ENST00000460485 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
ERCC3-205ENST00000460485 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
ERCC3-205ENST00000460485 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
ERCC3-205ENST00000460485 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
ERCC3-205ENST00000460485 C11orf95C9JLR9 678 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-205ENST00000460485 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-205ENST00000460485 PIK3C2BO00750 1634 aa19.39■□□□□ 0.69
ERCC3-205ENST00000460485 PPLO60437 1756 aa19.39■□□□□ 0.69
ERCC3-205ENST00000460485 EIF3AQ14152 1382 aaKnown RBP19.38■□□□□ 0.69
ERCC3-205ENST00000460485 SETBP1Q9Y6X0 1596 aa19.37■□□□□ 0.69
ERCC3-205ENST00000460485 NRXN1Q9ULB1 1477 aa19.37■□□□□ 0.69
ERCC3-205ENST00000460485 POTEAQ6S8J7 498 aa19.37■□□□□ 0.69
ERCC3-205ENST00000460485 SCAF11Q99590 1463 aaKnown RBP19.36■□□□□ 0.69
ERCC3-205ENST00000460485 FAM135BQ49AJ0 1406 aa19.36■□□□□ 0.69
ERCC3-205ENST00000460485 RGL3Q3MIN7 710 aa19.34■□□□□ 0.69
ERCC3-205ENST00000460485 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.68
ERCC3-205ENST00000460485 NOS1P29475 1434 aa19.32■□□□□ 0.68
ERCC3-205ENST00000460485 RPGRIP1LQ68CZ1 1315 aa19.31■□□□□ 0.68
ERCC3-205ENST00000460485 CDCA8Q53HL2 280 aa19.3■□□□□ 0.68
ERCC3-205ENST00000460485 KDM5AP29375 1690 aaKnown RBP19.29■□□□□ 0.68
ERCC3-205ENST00000460485 TMF1P82094 1093 aa19.28■□□□□ 0.68
ERCC3-205ENST00000460485 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
ERCC3-205ENST00000460485 RALBP1Q15311 655 aa19.26■□□□□ 0.67
ERCC3-205ENST00000460485 SBNO2Q9Y2G9 1366 aa19.25■□□□□ 0.67
ERCC3-205ENST00000460485 LTKP29376 864 aa19.25■□□□□ 0.67
ERCC3-205ENST00000460485 TXNDC2Q86VQ3 553 aa19.25■□□□□ 0.67
ERCC3-205ENST00000460485 ERVK-7P63135 1459 aa19.24■□□□□ 0.67
ERCC3-205ENST00000460485 ARHGAP23Q9P227 1491 aa19.24■□□□□ 0.67
ERCC3-205ENST00000460485 TESK2Q96S53 571 aa19.24■□□□□ 0.67
ERCC3-205ENST00000460485 UBR1Q8IWV7 1749 aa19.23■□□□□ 0.67
ERCC3-205ENST00000460485 NBPF1Q3BBV0 1214 aa19.23■□□□□ 0.67
ERCC3-205ENST00000460485 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
ERCC3-205ENST00000460485 SLIT1O75093 1534 aa19.23■□□□□ 0.67
ERCC3-205ENST00000460485 CFAP65Q6ZU64 1925 aaKnown RBP19.23■□□□□ 0.67
ERCC3-205ENST00000460485 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
ERCC3-205ENST00000460485 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
ERCC3-205ENST00000460485 PIK3C2GO75747 1445 aa19.21■□□□□ 0.67
ERCC3-205ENST00000460485 ZFYVE9O95405 1425 aa19.21■□□□□ 0.67
ERCC3-205ENST00000460485 MYOM1P52179 1685 aa19.2■□□□□ 0.66
ERCC3-205ENST00000460485 INSRP06213 1382 aa19.19■□□□□ 0.66
ERCC3-205ENST00000460485 NEXMIFQ5QGS0 1516 aa19.19■□□□□ 0.66
ERCC3-205ENST00000460485 MYBBP1AQ9BQG0 1328 aaKnown RBP19.19■□□□□ 0.66
ERCC3-205ENST00000460485 KCNA6P17658 529 aa19.18■□□□□ 0.66
ERCC3-205ENST00000460485 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
ERCC3-205ENST00000460485 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
ERCC3-205ENST00000460485 ZBED9Q6R2W3 1325 aa19.18■□□□□ 0.66
ERCC3-205ENST00000460485 TMEM94Q12767 1356 aa19.18■□□□□ 0.66
ERCC3-205ENST00000460485 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
ERCC3-205ENST00000460485 ROBO1Q9Y6N7 1651 aa19.17■□□□□ 0.66
ERCC3-205ENST00000460485 HNRNPUQ00839 825 aaKnown RBP eCLIP19.16■□□□□ 0.66
ERCC3-205ENST00000460485 UPF1Q92900 1129 aaKnown RBP eCLIP19.16■□□□□ 0.66
ERCC3-205ENST00000460485 POLR3GLQ9BT43 218 aa19.16■□□□□ 0.66
ERCC3-205ENST00000460485 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.66
ERCC3-205ENST00000460485 JCADQ9P266 1359 aa19.14■□□□□ 0.65
ERCC3-205ENST00000460485 NPC1L1Q9UHC9 1359 aa19.14■□□□□ 0.65
ERCC3-205ENST00000460485 ADGRB1O14514 1584 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms