RNA–Protein interactions for RNA: ENST00000460469.1

NMD3-202, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-202ENST00000460469 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
NMD3-202ENST00000460469 MAST1Q9Y2H9 1570 aa22.78■■□□□ 1.24
NMD3-202ENST00000460469 CARD14Q9BXL6 1004 aa22.78■■□□□ 1.24
NMD3-202ENST00000460469 UGGT1Q9NYU2 1555 aa22.77■■□□□ 1.24
NMD3-202ENST00000460469 ATP10AO60312 1499 aa22.77■■□□□ 1.24
NMD3-202ENST00000460469 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
NMD3-202ENST00000460469 NEFMP07197 916 aa22.76■■□□□ 1.23
NMD3-202ENST00000460469 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
NMD3-202ENST00000460469 ZMYM4Q5VZL5 1548 aa22.75■■□□□ 1.23
NMD3-202ENST00000460469 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
NMD3-202ENST00000460469 SCAPERQ9BY12 1400 aa22.75■■□□□ 1.23
NMD3-202ENST00000460469 ZNF521Q96K83 1311 aa22.72■■□□□ 1.23
NMD3-202ENST00000460469 SLFN5Q08AF3 891 aa22.72■■□□□ 1.23
NMD3-202ENST00000460469 TRAK1Q9UPV9 953 aa22.71■■□□□ 1.23
NMD3-202ENST00000460469 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
NMD3-202ENST00000460469 MS4A1P11836 297 aa22.71■■□□□ 1.23
NMD3-202ENST00000460469 TMEM132EQ6IEE7 984 aa22.71■■□□□ 1.23
NMD3-202ENST00000460469 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
NMD3-202ENST00000460469 MADDQ8WXG6 1647 aa22.7■■□□□ 1.22
NMD3-202ENST00000460469 KDM2BQ8NHM5 1336 aa22.69■■□□□ 1.22
NMD3-202ENST00000460469 ABCC1P33527 1531 aa22.69■■□□□ 1.22
NMD3-202ENST00000460469 ZCCHC11Q5TAX3 1644 aaKnown RBP22.69■■□□□ 1.22
NMD3-202ENST00000460469 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
NMD3-202ENST00000460469 CLTCL1P53675 1640 aa22.67■■□□□ 1.22
NMD3-202ENST00000460469 SLC12A5Q9H2X9 1139 aa22.67■■□□□ 1.22
NMD3-202ENST00000460469 LAMC1P11047 1609 aa22.66■■□□□ 1.22
NMD3-202ENST00000460469 SHROOM2Q13796 1616 aa22.65■■□□□ 1.22
NMD3-202ENST00000460469 GGT6Q6P531 493 aa22.65■■□□□ 1.22
NMD3-202ENST00000460469 BCL2L13Q9BXK5 485 aa22.65■■□□□ 1.22
NMD3-202ENST00000460469 FRAT1Q92837 279 aaPredicted RBP22.64■■□□□ 1.22
NMD3-202ENST00000460469 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.22
NMD3-202ENST00000460469 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
NMD3-202ENST00000460469 PANK1Q8TE04 598 aa22.64■■□□□ 1.21
NMD3-202ENST00000460469 SAFB2Q14151 953 aaKnown RBP eCLIP22.63■■□□□ 1.21
NMD3-202ENST00000460469 IGHDP01880 384 aa22.63■■□□□ 1.21
NMD3-202ENST00000460469 RTN4Q9NQC3 1192 aaKnown RBP22.63■■□□□ 1.21
NMD3-202ENST00000460469 TNNQ9UQP3 1299 aa22.62■■□□□ 1.21
NMD3-202ENST00000460469 CENPQQ7L2Z9 268 aaPredicted RBP22.62■■□□□ 1.21
NMD3-202ENST00000460469 C8orf34Q49A92 452 aa22.61■■□□□ 1.21
NMD3-202ENST00000460469 COG6Q9Y2V7 657 aa22.61■■□□□ 1.21
NMD3-202ENST00000460469 ZFYVE16Q7Z3T8 1539 aa22.61■■□□□ 1.21
NMD3-202ENST00000460469 KANK1Q14678 1352 aa22.6■■□□□ 1.21
NMD3-202ENST00000460469 TRPM2O94759 1503 aa22.6■■□□□ 1.21
NMD3-202ENST00000460469 PTPRTO14522 1441 aa22.6■■□□□ 1.21
NMD3-202ENST00000460469 FANCAO15360 1455 aa22.59■■□□□ 1.21
NMD3-202ENST00000460469 IL27Q8NEV9 243 aa22.59■■□□□ 1.21
NMD3-202ENST00000460469 IQGAP1P46940 1657 aa22.59■■□□□ 1.21
NMD3-202ENST00000460469 CFAP65Q6ZU64 1925 aaKnown RBP22.58■■□□□ 1.2
NMD3-202ENST00000460469 CANXP27824 592 aaKnown RBP22.58■■□□□ 1.2
NMD3-202ENST00000460469 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.58■■□□□ 1.2
NMD3-202ENST00000460469 ERVK-7P63135 1459 aa22.58■■□□□ 1.2
NMD3-202ENST00000460469 EIF3AQ14152 1382 aaKnown RBP22.57■■□□□ 1.2
NMD3-202ENST00000460469 TRMT2AQ8IZ69 625 aaKnown RBP22.56■■□□□ 1.2
NMD3-202ENST00000460469 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
NMD3-202ENST00000460469 WWC1Q8IX03 1113 aa22.56■■□□□ 1.2
NMD3-202ENST00000460469 CLUAP1Q96AJ1 413 aa22.56■■□□□ 1.2
NMD3-202ENST00000460469 INSRP06213 1382 aa22.55■■□□□ 1.2
NMD3-202ENST00000460469 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
NMD3-202ENST00000460469 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
NMD3-202ENST00000460469 FAM161AQ3B820 660 aa22.54■■□□□ 1.2
NMD3-202ENST00000460469 MYOM1P52179 1685 aa22.54■■□□□ 1.2
NMD3-202ENST00000460469 SYNMO15061 1565 aa22.54■■□□□ 1.2
NMD3-202ENST00000460469 NOS1P29475 1434 aa22.53■■□□□ 1.2
NMD3-202ENST00000460469 ADGRL1O94910 1474 aa22.53■■□□□ 1.2
NMD3-202ENST00000460469 E9PSI1 815 aa22.52■■□□□ 1.2
NMD3-202ENST00000460469 DAXXQ9UER7 740 aaPredicted RBP22.52■■□□□ 1.2
NMD3-202ENST00000460469 SEC24BO95487 1268 aa22.52■■□□□ 1.2
NMD3-202ENST00000460469 ATP7AQ04656 1500 aa22.52■■□□□ 1.19
NMD3-202ENST00000460469 NKTRP30414 1462 aaKnown RBP22.52■■□□□ 1.19
NMD3-202ENST00000460469 CENPJQ9HC77 1338 aaPredicted RBP22.51■■□□□ 1.19
NMD3-202ENST00000460469 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
NMD3-202ENST00000460469 MTHFSP49914 203 aa22.5■■□□□ 1.19
NMD3-202ENST00000460469 NSD3Q9BZ95 1437 aa22.5■■□□□ 1.19
NMD3-202ENST00000460469 TCP11L2Q8N4U5 519 aa22.5■■□□□ 1.19
NMD3-202ENST00000460469 NFKBIBQ15653 356 aa22.49■■□□□ 1.19
NMD3-202ENST00000460469 CEP152O94986 1710 aa22.49■■□□□ 1.19
NMD3-202ENST00000460469 RLBP1P12271 317 aa22.49■■□□□ 1.19
NMD3-202ENST00000460469 STK26Q9P289 416 aa22.47■■□□□ 1.19
NMD3-202ENST00000460469 DDRGK1Q96HY6 314 aa22.46■■□□□ 1.19
NMD3-202ENST00000460469 ABCA6Q8N139 1617 aa22.46■■□□□ 1.19
NMD3-202ENST00000460469 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
NMD3-202ENST00000460469 PPM1GO15355 546 aaPredicted RBP22.44■■□□□ 1.18
NMD3-202ENST00000460469 KDM5AP29375 1690 aaKnown RBP22.44■■□□□ 1.18
NMD3-202ENST00000460469 UHRF1BP1LA0JNW5 1464 aa22.44■■□□□ 1.18
NMD3-202ENST00000460469 STAC3Q96MF2 364 aa22.43■■□□□ 1.18
NMD3-202ENST00000460469 TET3O43151 1660 aa22.43■■□□□ 1.18
NMD3-202ENST00000460469 RAPGEF3O95398 923 aa22.43■■□□□ 1.18
NMD3-202ENST00000460469 NPC1L1Q9UHC9 1359 aa22.43■■□□□ 1.18
NMD3-202ENST00000460469 FRAT2O75474 233 aaPredicted RBP22.42■■□□□ 1.18
NMD3-202ENST00000460469 PCDHB15Q9Y5E8 787 aa22.42■■□□□ 1.18
NMD3-202ENST00000460469 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
NMD3-202ENST00000460469 U2AF1L5P0DN76 240 aaPredicted RBP22.41■■□□□ 1.18
NMD3-202ENST00000460469 U2AF1Q01081 240 aaKnown RBP eCLIP22.41■■□□□ 1.18
NMD3-202ENST00000460469 MAP3K4Q9Y6R4 1608 aa22.41■■□□□ 1.18
NMD3-202ENST00000460469 TSR2Q969E8 191 aaKnown RBP22.41■■□□□ 1.18
NMD3-202ENST00000460469 ASXL2Q76L83 1435 aa22.4■■□□□ 1.18
NMD3-202ENST00000460469 RARSP54136 660 aaKnown RBP22.4■■□□□ 1.18
NMD3-202ENST00000460469 MROH1Q8NDA8 1641 aa22.39■■□□□ 1.18
NMD3-202ENST00000460469 MROH2AA6NES4 1674 aa22.39■■□□□ 1.17
NMD3-202ENST00000460469 DEPDC5O75140 1603 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms