RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
GARNL3-211ENST00000460176 SLIT1O75093 1534 aa14.95□□□□□ -0.02
GARNL3-211ENST00000460176 PPLO60437 1756 aa14.95□□□□□ -0.02
GARNL3-211ENST00000460176 ARHGAP23Q9P227 1491 aa14.95□□□□□ -0.02
GARNL3-211ENST00000460176 POLR1AO95602 1720 aaPredicted RBP14.95□□□□□ -0.02
GARNL3-211ENST00000460176 CLSPNQ9HAW4 1339 aa14.94□□□□□ -0.02
GARNL3-211ENST00000460176 NEXMIFQ5QGS0 1516 aa14.94□□□□□ -0.02
GARNL3-211ENST00000460176 SIN3AQ96ST3 1273 aa14.94□□□□□ -0.02
GARNL3-211ENST00000460176 CHGAP10645 457 aaKnown RBP14.93□□□□□ -0.02
GARNL3-211ENST00000460176 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
GARNL3-211ENST00000460176 ZFYVE9O95405 1425 aa14.92□□□□□ -0.02
GARNL3-211ENST00000460176 TMEM2Q9UHN6 1383 aa14.91□□□□□ -0.02
GARNL3-211ENST00000460176 THEMISQ8N1K5 641 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-211ENST00000460176 STRCQ7RTU9 1775 aa14.9□□□□□ -0.02
GARNL3-211ENST00000460176 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
GARNL3-211ENST00000460176 HSPA2P54652 639 aa14.89□□□□□ -0.03
GARNL3-211ENST00000460176 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
GARNL3-211ENST00000460176 RIMS2Q9UQ26 1411 aa14.89□□□□□ -0.03
GARNL3-211ENST00000460176 RGL3Q3MIN7 710 aa14.88□□□□□ -0.03
GARNL3-211ENST00000460176 SCAF11Q99590 1463 aaKnown RBP14.87□□□□□ -0.03
GARNL3-211ENST00000460176 ZNF326Q5BKZ1 582 aaKnown RBP14.86□□□□□ -0.03
GARNL3-211ENST00000460176 MYOM2P54296 1465 aa14.86□□□□□ -0.03
GARNL3-211ENST00000460176 RPGRIP1LQ68CZ1 1315 aa14.86□□□□□ -0.03
GARNL3-211ENST00000460176 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
GARNL3-211ENST00000460176 NRXN3Q9Y4C0 1643 aa14.84□□□□□ -0.03
GARNL3-211ENST00000460176 MED14O60244 1454 aa14.84□□□□□ -0.03
GARNL3-211ENST00000460176 LTKP29376 864 aa14.84□□□□□ -0.03
GARNL3-211ENST00000460176 NRXN1Q9ULB1 1477 aa14.83□□□□□ -0.03
GARNL3-211ENST00000460176 TXNDC2Q86VQ3 553 aa14.83□□□□□ -0.04
GARNL3-211ENST00000460176 TONSLQ96HA7 1378 aa14.83□□□□□ -0.04
GARNL3-211ENST00000460176 SETBP1Q9Y6X0 1596 aa14.82□□□□□ -0.04
GARNL3-211ENST00000460176 NUTM2DQ5VT03 806 aaPredicted RBP14.82□□□□□ -0.04
GARNL3-211ENST00000460176 ANKLE2Q86XL3 938 aa14.82□□□□□ -0.04
GARNL3-211ENST00000460176 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.82□□□□□ -0.04
GARNL3-211ENST00000460176 L3MBTL2Q969R5 705 aa14.82□□□□□ -0.04
GARNL3-211ENST00000460176 EID1Q9Y6B2 187 aa14.82□□□□□ -0.04
GARNL3-211ENST00000460176 SETD1AO15047 1707 aaKnown RBP14.82□□□□□ -0.04
GARNL3-211ENST00000460176 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
GARNL3-211ENST00000460176 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
GARNL3-211ENST00000460176 PLEKHG1Q9ULL1 1385 aa14.81□□□□□ -0.04
GARNL3-211ENST00000460176 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
GARNL3-211ENST00000460176 ZBTB22O15209 634 aa14.8□□□□□ -0.04
GARNL3-211ENST00000460176 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
GARNL3-211ENST00000460176 ADGRF5Q8IZF2 1346 aa14.8□□□□□ -0.04
GARNL3-211ENST00000460176 LAMC1P11047 1609 aa14.8□□□□□ -0.04
GARNL3-211ENST00000460176 VGFO15240 615 aaPredicted RBP14.79□□□□□ -0.04
GARNL3-211ENST00000460176 PIK3C2GO75747 1445 aa14.79□□□□□ -0.04
GARNL3-211ENST00000460176 PPP1R15AO75807 674 aaPredicted RBP14.79□□□□□ -0.04
GARNL3-211ENST00000460176 DIP2AQ14689 1571 aa14.78□□□□□ -0.04
GARNL3-211ENST00000460176 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
GARNL3-211ENST00000460176 KDM2AQ9Y2K7 1162 aa14.78□□□□□ -0.04
GARNL3-211ENST00000460176 KIAA1210Q9ULL0 1709 aa14.78□□□□□ -0.04
GARNL3-211ENST00000460176 ALKQ9UM73 1620 aa14.77□□□□□ -0.04
GARNL3-211ENST00000460176 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.04
GARNL3-211ENST00000460176 PRAG1Q86YV5 1406 aa14.77□□□□□ -0.04
GARNL3-211ENST00000460176 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
GARNL3-211ENST00000460176 TRPM1Q7Z4N2 1603 aa14.77□□□□□ -0.05
GARNL3-211ENST00000460176 ASXL1Q8IXJ9 1541 aa14.74□□□□□ -0.05
GARNL3-211ENST00000460176 CHD2O14647 1828 aaKnown RBP14.72□□□□□ -0.05
GARNL3-211ENST00000460176 NBPF8Q3BBV2 869 aa14.71□□□□□ -0.05
GARNL3-211ENST00000460176 BCANQ96GW7 911 aa14.71□□□□□ -0.05
GARNL3-211ENST00000460176 SLC26A8Q96RN1 970 aa14.71□□□□□ -0.05
GARNL3-211ENST00000460176 ADGRB1O14514 1584 aa14.71□□□□□ -0.05
GARNL3-211ENST00000460176 STRCP1A6NGW2 1772 aa14.7□□□□□ -0.06
GARNL3-211ENST00000460176 NWD1Q149M9 1564 aa14.7□□□□□ -0.06
GARNL3-211ENST00000460176 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
GARNL3-211ENST00000460176 CFAP70Q5T0N1 1121 aa14.7□□□□□ -0.06
GARNL3-211ENST00000460176 C14orf93Q9H972 538 aaKnown RBP14.7□□□□□ -0.06
GARNL3-211ENST00000460176 TBX22Q9Y458 520 aa14.7□□□□□ -0.06
GARNL3-211ENST00000460176 RALGAPBQ86X10 1494 aa14.69□□□□□ -0.06
GARNL3-211ENST00000460176 XRN1Q8IZH2 1706 aaKnown RBP14.69□□□□□ -0.06
GARNL3-211ENST00000460176 METP08581 1390 aa14.69□□□□□ -0.06
GARNL3-211ENST00000460176 KNDC1Q76NI1 1749 aa14.69□□□□□ -0.06
GARNL3-211ENST00000460176 PIK3R4Q99570 1358 aa14.67□□□□□ -0.06
GARNL3-211ENST00000460176 PTPRUQ92729 1446 aa14.66□□□□□ -0.06
GARNL3-211ENST00000460176 ARHGEF28Q8N1W1 1705 aaKnown RBP14.64□□□□□ -0.07
GARNL3-211ENST00000460176 GPRASP1Q5JY77 1395 aa14.64□□□□□ -0.07
GARNL3-211ENST00000460176 NBPF1Q3BBV0 1214 aa14.64□□□□□ -0.07
GARNL3-211ENST00000460176 TMEM132EQ6IEE7 984 aa14.64□□□□□ -0.07
GARNL3-211ENST00000460176 CPS1P31327 1500 aa14.64□□□□□ -0.07
GARNL3-211ENST00000460176 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
GARNL3-211ENST00000460176 LRPPRCP42704 1394 aaKnown RBP14.63□□□□□ -0.07
GARNL3-211ENST00000460176 ZNF335Q9H4Z2 1342 aaPredicted RBP14.63□□□□□ -0.07
GARNL3-211ENST00000460176 TECPR2O15040 1411 aa14.62□□□□□ -0.07
GARNL3-211ENST00000460176 LTBP4Q8N2S1 1624 aa14.62□□□□□ -0.07
GARNL3-211ENST00000460176 NKTRP30414 1462 aaKnown RBP14.62□□□□□ -0.07
GARNL3-211ENST00000460176 DLC1Q96QB1 1528 aa14.61□□□□□ -0.07
GARNL3-211ENST00000460176 ROCK2O75116 1388 aaKnown RBP14.61□□□□□ -0.07
GARNL3-211ENST00000460176 KCNA6P17658 529 aa14.61□□□□□ -0.07
GARNL3-211ENST00000460176 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
GARNL3-211ENST00000460176 PTCH1Q13635 1447 aa14.6□□□□□ -0.07
GARNL3-211ENST00000460176 AMOTL2Q9Y2J4 779 aa14.6□□□□□ -0.07
GARNL3-211ENST00000460176 ABCC11Q96J66 1382 aa14.6□□□□□ -0.07
GARNL3-211ENST00000460176 ZEB1P37275 1124 aaPredicted RBP14.58□□□□□ -0.08
GARNL3-211ENST00000460176 STK26Q9P289 416 aa14.58□□□□□ -0.08
GARNL3-211ENST00000460176 ROBO2Q9HCK4 1378 aa14.58□□□□□ -0.08
GARNL3-211ENST00000460176 LRRC7Q96NW7 1537 aa14.56□□□□□ -0.08
GARNL3-211ENST00000460176 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
GARNL3-211ENST00000460176 NALCNQ8IZF0 1738 aa14.56□□□□□ -0.08
GARNL3-211ENST00000460176 CARD11Q9BXL7 1154 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms