RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
CCDC50-203ENST00000460064 CLK2P49760 499 aaKnown RBP10.77□□□□□ -0.69
CCDC50-203ENST00000460064 EMP3P54852 163 aa10.76□□□□□ -0.69
CCDC50-203ENST00000460064 POTEEQ6S8J3 1075 aa10.76□□□□□ -0.69
CCDC50-203ENST00000460064 RDH13Q8NBN7 331 aa10.76□□□□□ -0.69
CCDC50-203ENST00000460064 MARVELD3Q96A59 401 aa10.76□□□□□ -0.69
CCDC50-203ENST00000460064 RABGEF1Q9UJ41 708 aa10.76□□□□□ -0.69
CCDC50-203ENST00000460064 HDGFP51858 240 aaKnown RBP10.75□□□□□ -0.69
CCDC50-203ENST00000460064 RSPH4AQ5TD94 716 aa10.75□□□□□ -0.69
CCDC50-203ENST00000460064 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
CCDC50-203ENST00000460064 RIC3Q7Z5B4 369 aa10.75□□□□□ -0.69
CCDC50-203ENST00000460064 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC50-203ENST00000460064 FAM205CA6NFA0 338 aa10.74□□□□□ -0.69
CCDC50-203ENST00000460064 SLC4A5Q9BY07 1137 aa10.73□□□□□ -0.69
CCDC50-203ENST00000460064 ZNF687Q8N1G0 1237 aa10.72□□□□□ -0.69
CCDC50-203ENST00000460064 FAM163AQ96GL9 167 aaPredicted RBP10.72□□□□□ -0.69
CCDC50-203ENST00000460064 LIMD1Q9UGP4 676 aa10.72□□□□□ -0.69
CCDC50-203ENST00000460064 SEPT9Q9UHD8 586 aaPredicted RBP10.72□□□□□ -0.69
CCDC50-203ENST00000460064 PBX2P40425 430 aa10.71□□□□□ -0.69
CCDC50-203ENST00000460064 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
CCDC50-203ENST00000460064 VPS9D1Q9Y2B5 631 aa10.7□□□□□ -0.7
CCDC50-203ENST00000460064 MOXD2PA6NHM9 499 aa10.69□□□□□ -0.7
CCDC50-203ENST00000460064 SPTLC1O15269 473 aa10.69□□□□□ -0.7
CCDC50-203ENST00000460064 KDM4AO75164 1064 aa10.69□□□□□ -0.7
CCDC50-203ENST00000460064 NDUFV2P19404 249 aa10.69□□□□□ -0.7
CCDC50-203ENST00000460064 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
CCDC50-203ENST00000460064 GCGRP47871 477 aa10.68□□□□□ -0.7
CCDC50-203ENST00000460064 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
CCDC50-203ENST00000460064 RSBN1LQ6PCB5 846 aaPredicted RBP10.68□□□□□ -0.7
CCDC50-203ENST00000460064 UBTFP17480 764 aaKnown RBP10.67□□□□□ -0.7
CCDC50-203ENST00000460064 RFC5P40937 340 aa10.67□□□□□ -0.7
CCDC50-203ENST00000460064 SLC4A3P48751 1232 aa10.67□□□□□ -0.7
CCDC50-203ENST00000460064 SLC10A3P09131 477 aa10.66□□□□□ -0.7
CCDC50-203ENST00000460064 MCM6Q14566 821 aa10.66□□□□□ -0.7
CCDC50-203ENST00000460064 TUSC1Q2TAM9 212 aa10.66□□□□□ -0.7
CCDC50-203ENST00000460064 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
CCDC50-203ENST00000460064 FBXO31Q5XUX0 539 aaPredicted RBP10.65□□□□□ -0.7
CCDC50-203ENST00000460064 PPP2R2DQ66LE6 453 aa10.65□□□□□ -0.7
CCDC50-203ENST00000460064 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
CCDC50-203ENST00000460064 ARXQ96QS3 562 aa10.65□□□□□ -0.7
CCDC50-203ENST00000460064 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
CCDC50-203ENST00000460064 PCDHB15Q9Y5E8 787 aa10.65□□□□□ -0.7
CCDC50-203ENST00000460064 GJA5P36382 358 aa10.64□□□□□ -0.71
CCDC50-203ENST00000460064 USP46P62068 366 aa10.64□□□□□ -0.71
CCDC50-203ENST00000460064 LAPTM4BQ86VI4 370 aa10.64□□□□□ -0.71
CCDC50-203ENST00000460064 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
CCDC50-203ENST00000460064 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
CCDC50-203ENST00000460064 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
CCDC50-203ENST00000460064 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
CCDC50-203ENST00000460064 SAMD7Q7Z3H4 446 aa10.63□□□□□ -0.71
CCDC50-203ENST00000460064 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
CCDC50-203ENST00000460064 SLF2Q8IX21 1173 aa10.63□□□□□ -0.71
CCDC50-203ENST00000460064 BANK1Q8NDB2 785 aa10.63□□□□□ -0.71
CCDC50-203ENST00000460064 POTEB3A0JP26 581 aa10.62□□□□□ -0.71
CCDC50-203ENST00000460064 POTEBQ6S5H4 581 aa10.62□□□□□ -0.71
CCDC50-203ENST00000460064 SPDYE5A6NIY4 337 aa10.61□□□□□ -0.71
CCDC50-203ENST00000460064 A6NJR5 290 aa10.61□□□□□ -0.71
CCDC50-203ENST00000460064 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
CCDC50-203ENST00000460064 LILRB3O75022 631 aa10.61□□□□□ -0.71
CCDC50-203ENST00000460064 QPCTQ16769 361 aa10.61□□□□□ -0.71
CCDC50-203ENST00000460064 TK2O00142 265 aa10.6□□□□□ -0.71
CCDC50-203ENST00000460064 HOXA2O43364 376 aa10.6□□□□□ -0.71
CCDC50-203ENST00000460064 RAD21O60216 631 aa10.6□□□□□ -0.71
CCDC50-203ENST00000460064 RNF40O75150 1001 aa10.6□□□□□ -0.71
CCDC50-203ENST00000460064 FDX1P10109 184 aa10.6□□□□□ -0.71
CCDC50-203ENST00000460064 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
CCDC50-203ENST00000460064 SNRKQ9NRH2 765 aa10.6□□□□□ -0.71
CCDC50-203ENST00000460064 RTL5Q5HYW3 569 aaPredicted RBP10.59□□□□□ -0.71
CCDC50-203ENST00000460064 ZFRQ96KR1 1074 aaKnown RBP10.59□□□□□ -0.71
CCDC50-203ENST00000460064 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
CCDC50-203ENST00000460064 PRPF38BQ5VTL8 546 aaKnown RBP10.58□□□□□ -0.72
CCDC50-203ENST00000460064 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
CCDC50-203ENST00000460064 APBB1O00213 710 aa10.57□□□□□ -0.72
CCDC50-203ENST00000460064 TRAK2O60296 914 aa10.57□□□□□ -0.72
CCDC50-203ENST00000460064 AP1G2O75843 785 aa10.57□□□□□ -0.72
CCDC50-203ENST00000460064 HRCP23327 699 aa10.57□□□□□ -0.72
CCDC50-203ENST00000460064 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
CCDC50-203ENST00000460064 STAC3Q96MF2 364 aa10.57□□□□□ -0.72
CCDC50-203ENST00000460064 ZBTB3Q9H5J0 574 aa10.57□□□□□ -0.72
CCDC50-203ENST00000460064 ARID3CA6NKF2 412 aa10.56□□□□□ -0.72
CCDC50-203ENST00000460064 CFHP08603 1231 aa10.56□□□□□ -0.72
CCDC50-203ENST00000460064 GUCA2AQ02747 115 aa10.56□□□□□ -0.72
CCDC50-203ENST00000460064 HLA-CQ95604 372 aa10.56□□□□□ -0.72
CCDC50-203ENST00000460064 POM121Q96HA1 1249 aa10.56□□□□□ -0.72
CCDC50-203ENST00000460064 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
CCDC50-203ENST00000460064 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC50-203ENST00000460064 FUT2Q10981 343 aa10.55□□□□□ -0.72
CCDC50-203ENST00000460064 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
CCDC50-203ENST00000460064 HOMEZQ8IX15 550 aa10.54□□□□□ -0.72
CCDC50-203ENST00000460064 GOLGA8CPA6NN73 597 aa10.53□□□□□ -0.72
CCDC50-203ENST00000460064 ATP6V1AP38606 617 aa10.53□□□□□ -0.72
CCDC50-203ENST00000460064 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
CCDC50-203ENST00000460064 PROSER2Q86WR7 435 aaPredicted RBP10.53□□□□□ -0.72
CCDC50-203ENST00000460064 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
CCDC50-203ENST00000460064 ARID3AQ99856 593 aa10.53□□□□□ -0.72
CCDC50-203ENST00000460064 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
CCDC50-203ENST00000460064 MTMR2Q13614 643 aa10.52□□□□□ -0.73
CCDC50-203ENST00000460064 NECTIN2Q92692 538 aa10.52□□□□□ -0.73
CCDC50-203ENST00000460064 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
CCDC50-203ENST00000460064 COG6Q9Y2V7 657 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms