RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
HPS4-207ENST00000459918 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
HPS4-207ENST00000459918 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
HPS4-207ENST00000459918 NWD1Q149M9 1564 aa12.37□□□□□ -0.43
HPS4-207ENST00000459918 DAPK1P53355 1430 aa12.37□□□□□ -0.43
HPS4-207ENST00000459918 GCC2Q8IWJ2 1684 aa12.36□□□□□ -0.43
HPS4-207ENST00000459918 CHIC2Q9UKJ5 165 aa12.36□□□□□ -0.43
HPS4-207ENST00000459918 ABCC5O15440 1437 aa12.36□□□□□ -0.43
HPS4-207ENST00000459918 ANKRD30AQ9BXX3 1397 aa12.35□□□□□ -0.43
HPS4-207ENST00000459918 IDI1Q13907 227 aa12.35□□□□□ -0.43
HPS4-207ENST00000459918 TET3O43151 1660 aa12.35□□□□□ -0.43
HPS4-207ENST00000459918 JCADQ9P266 1359 aa12.34□□□□□ -0.43
HPS4-207ENST00000459918 LMTK2Q8IWU2 1503 aa12.34□□□□□ -0.43
HPS4-207ENST00000459918 CHD2O14647 1828 aaKnown RBP12.33□□□□□ -0.44
HPS4-207ENST00000459918 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
HPS4-207ENST00000459918 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
HPS4-207ENST00000459918 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
HPS4-207ENST00000459918 COL16A1Q07092 1604 aaPredicted RBP12.31□□□□□ -0.44
HPS4-207ENST00000459918 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
HPS4-207ENST00000459918 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
HPS4-207ENST00000459918 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
HPS4-207ENST00000459918 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
HPS4-207ENST00000459918 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
HPS4-207ENST00000459918 NOS1P29475 1434 aa12.29□□□□□ -0.44
HPS4-207ENST00000459918 RIMS2Q9UQ26 1411 aa12.28□□□□□ -0.44
HPS4-207ENST00000459918 ATF3P18847 181 aa12.28□□□□□ -0.44
HPS4-207ENST00000459918 ZNF772Q68DY9 489 aaPredicted RBP12.28□□□□□ -0.44
HPS4-207ENST00000459918 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
HPS4-207ENST00000459918 PLEKHG1Q9ULL1 1385 aa12.28□□□□□ -0.44
HPS4-207ENST00000459918 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.28□□□□□ -0.44
HPS4-207ENST00000459918 RPRD2Q5VT52 1461 aaKnown RBP12.27□□□□□ -0.44
HPS4-207ENST00000459918 TMEM131LA2VDJ0 1609 aa12.27□□□□□ -0.44
HPS4-207ENST00000459918 FAM50AQ14320 339 aaKnown RBP12.27□□□□□ -0.45
HPS4-207ENST00000459918 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.45
HPS4-207ENST00000459918 SPATA31A6Q5VVP1 1343 aa12.27□□□□□ -0.45
HPS4-207ENST00000459918 LRP6O75581 1613 aa12.26□□□□□ -0.45
HPS4-207ENST00000459918 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
HPS4-207ENST00000459918 DIP2AQ14689 1571 aa12.26□□□□□ -0.45
HPS4-207ENST00000459918 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
HPS4-207ENST00000459918 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
HPS4-207ENST00000459918 NUTM2DQ5VT03 806 aaPredicted RBP12.25□□□□□ -0.45
HPS4-207ENST00000459918 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
HPS4-207ENST00000459918 NUTM2AQ8IVF1 878 aaPredicted RBP12.25□□□□□ -0.45
HPS4-207ENST00000459918 ZFYVE9O95405 1425 aa12.25□□□□□ -0.45
HPS4-207ENST00000459918 AHDC1Q5TGY3 1603 aaPredicted RBP12.24□□□□□ -0.45
HPS4-207ENST00000459918 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
HPS4-207ENST00000459918 ANKRD50Q9ULJ7 1429 aa12.24□□□□□ -0.45
HPS4-207ENST00000459918 TRPM2O94759 1503 aa12.23□□□□□ -0.45
HPS4-207ENST00000459918 ADGRL2O95490 1459 aa12.23□□□□□ -0.45
HPS4-207ENST00000459918 E9PCH4 1651 aa12.22□□□□□ -0.45
HPS4-207ENST00000459918 RXRBP28702 533 aa12.22□□□□□ -0.45
HPS4-207ENST00000459918 UNC13BO14795 1591 aa12.22□□□□□ -0.45
HPS4-207ENST00000459918 NCOA3Q9Y6Q9 1424 aa12.21□□□□□ -0.45
HPS4-207ENST00000459918 UPF1Q92900 1129 aaKnown RBP eCLIP12.21□□□□□ -0.45
HPS4-207ENST00000459918 TBX22Q9Y458 520 aa12.21□□□□□ -0.45
HPS4-207ENST00000459918 C19orf44Q9H6X5 657 aa12.2□□□□□ -0.46
HPS4-207ENST00000459918 ASXL1Q8IXJ9 1541 aa12.18□□□□□ -0.46
HPS4-207ENST00000459918 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
HPS4-207ENST00000459918 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
HPS4-207ENST00000459918 ADAMTS13Q76LX8 1427 aa12.18□□□□□ -0.46
HPS4-207ENST00000459918 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
HPS4-207ENST00000459918 AFF2P51816 1311 aa12.17□□□□□ -0.46
HPS4-207ENST00000459918 BRINP3Q76B58 766 aa12.17□□□□□ -0.46
HPS4-207ENST00000459918 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
HPS4-207ENST00000459918 NHSL1Q5SYE7 1610 aa12.17□□□□□ -0.46
HPS4-207ENST00000459918 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
HPS4-207ENST00000459918 C8orf37Q96NL8 207 aa12.16□□□□□ -0.46
HPS4-207ENST00000459918 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
HPS4-207ENST00000459918 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
HPS4-207ENST00000459918 XRN1Q8IZH2 1706 aaKnown RBP12.15□□□□□ -0.46
HPS4-207ENST00000459918 DCCP43146 1447 aa12.15□□□□□ -0.46
HPS4-207ENST00000459918 ZNF326Q5BKZ1 582 aaKnown RBP12.15□□□□□ -0.46
HPS4-207ENST00000459918 NALCNQ8IZF0 1738 aa12.14□□□□□ -0.47
HPS4-207ENST00000459918 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
HPS4-207ENST00000459918 NRXN3Q9Y4C0 1643 aa12.12□□□□□ -0.47
HPS4-207ENST00000459918 ITGAEP38570 1179 aa12.12□□□□□ -0.47
HPS4-207ENST00000459918 NUP155O75694 1391 aa12.12□□□□□ -0.47
HPS4-207ENST00000459918 RGS12O14924 1447 aa12.11□□□□□ -0.47
HPS4-207ENST00000459918 MST1RQ04912 1400 aa12.11□□□□□ -0.47
HPS4-207ENST00000459918 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
HPS4-207ENST00000459918 SETD5Q9C0A6 1442 aa12.11□□□□□ -0.47
HPS4-207ENST00000459918 SETBP1Q9Y6X0 1596 aa12.11□□□□□ -0.47
HPS4-207ENST00000459918 ADAMTS2O95450 1211 aa12.11□□□□□ -0.47
HPS4-207ENST00000459918 QTRT2Q9H974 415 aaKnown RBP12.11□□□□□ -0.47
HPS4-207ENST00000459918 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
HPS4-207ENST00000459918 NGLY1Q96IV0 654 aa12.1□□□□□ -0.47
HPS4-207ENST00000459918 KIF1BO60333 1816 aa12.09□□□□□ -0.47
HPS4-207ENST00000459918 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
HPS4-207ENST00000459918 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
HPS4-207ENST00000459918 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
HPS4-207ENST00000459918 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
HPS4-207ENST00000459918 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
HPS4-207ENST00000459918 METP08581 1390 aa12.06□□□□□ -0.48
HPS4-207ENST00000459918 ROCK1Q13464 1354 aa12.06□□□□□ -0.48
HPS4-207ENST00000459918 CLTCL1P53675 1640 aa12.05□□□□□ -0.48
HPS4-207ENST00000459918 USP21Q9UK80 565 aa12.05□□□□□ -0.48
HPS4-207ENST00000459918 NEXMIFQ5QGS0 1516 aa12.04□□□□□ -0.48
HPS4-207ENST00000459918 SRCAPQ6ZRS2 3230 aa12.04□□□□□ -0.48
HPS4-207ENST00000459918 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
HPS4-207ENST00000459918 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms