RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 ADGRB3O60242 1522 aa26.12■■□□□ 1.77
TMEM50B-205ENST00000459909 FGD6Q6ZV73 1430 aa26.11■■□□□ 1.77
TMEM50B-205ENST00000459909 MEX3CQ5U5Q3 659 aaKnown RBP26.09■■□□□ 1.77
TMEM50B-205ENST00000459909 COL16A1Q07092 1604 aaPredicted RBP26.09■■□□□ 1.77
TMEM50B-205ENST00000459909 LRP6O75581 1613 aa26.08■■□□□ 1.77
TMEM50B-205ENST00000459909 NCOA3Q9Y6Q9 1424 aa26.07■■□□□ 1.76
TMEM50B-205ENST00000459909 CROCC2H7BZ55 1655 aa26.07■■□□□ 1.76
TMEM50B-205ENST00000459909 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
TMEM50B-205ENST00000459909 PLEKHG1Q9ULL1 1385 aa26.06■■□□□ 1.76
TMEM50B-205ENST00000459909 DAPK1P53355 1430 aa26.05■■□□□ 1.76
TMEM50B-205ENST00000459909 HDGFP51858 240 aaKnown RBP26.04■■□□□ 1.76
TMEM50B-205ENST00000459909 LOC105371045A0A1W2PR82 267 aa26.03■■□□□ 1.76
TMEM50B-205ENST00000459909 ANKRD30AQ9BXX3 1397 aa26.03■■□□□ 1.76
TMEM50B-205ENST00000459909 ZFYVE9O95405 1425 aa26.03■■□□□ 1.76
TMEM50B-205ENST00000459909 PPP1R15AO75807 674 aaPredicted RBP26.01■■□□□ 1.75
TMEM50B-205ENST00000459909 PTPN23Q9H3S7 1636 aa26■■□□□ 1.75
TMEM50B-205ENST00000459909 RXRBP28702 533 aa26■■□□□ 1.75
TMEM50B-205ENST00000459909 C14orf37Q86TY3 774 aa26■■□□□ 1.75
TMEM50B-205ENST00000459909 CADPS2Q86UW7 1296 aa26■■□□□ 1.75
TMEM50B-205ENST00000459909 TBX22Q9Y458 520 aa26■■□□□ 1.75
TMEM50B-205ENST00000459909 CHD2O14647 1828 aaKnown RBP26■■□□□ 1.75
TMEM50B-205ENST00000459909 AHDC1Q5TGY3 1603 aaPredicted RBP25.99■■□□□ 1.75
TMEM50B-205ENST00000459909 RIMS2Q9UQ26 1411 aa25.98■■□□□ 1.75
TMEM50B-205ENST00000459909 C19orf44Q9H6X5 657 aa25.97■■□□□ 1.75
TMEM50B-205ENST00000459909 CHIC2Q9UKJ5 165 aa25.97■■□□□ 1.75
TMEM50B-205ENST00000459909 RPRD2Q5VT52 1461 aaKnown RBP25.97■■□□□ 1.75
TMEM50B-205ENST00000459909 CDK12Q9NYV4 1490 aaPredicted RBP25.96■■□□□ 1.75
TMEM50B-205ENST00000459909 ATF3P18847 181 aa25.95■■□□□ 1.74
TMEM50B-205ENST00000459909 SHPRHQ149N8 1683 aa25.95■■□□□ 1.74
TMEM50B-205ENST00000459909 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.93■■□□□ 1.74
TMEM50B-205ENST00000459909 PIK3R4Q99570 1358 aa25.91■■□□□ 1.74
TMEM50B-205ENST00000459909 ADAMTS13Q76LX8 1427 aa25.88■■□□□ 1.73
TMEM50B-205ENST00000459909 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.88■■□□□ 1.73
TMEM50B-205ENST00000459909 NUTM2BA6NNL0 878 aaPredicted RBP25.88■■□□□ 1.73
TMEM50B-205ENST00000459909 NUTM2EB1AL46 878 aaPredicted RBP25.88■■□□□ 1.73
TMEM50B-205ENST00000459909 BRINP3Q76B58 766 aa25.88■■□□□ 1.73
TMEM50B-205ENST00000459909 NUTM2AQ8IVF1 878 aaPredicted RBP25.88■■□□□ 1.73
TMEM50B-205ENST00000459909 TMEM131LA2VDJ0 1609 aa25.88■■□□□ 1.73
TMEM50B-205ENST00000459909 GCC2Q8IWJ2 1684 aa25.86■■□□□ 1.73
TMEM50B-205ENST00000459909 DIP2AQ14689 1571 aa25.86■■□□□ 1.73
TMEM50B-205ENST00000459909 AFF2P51816 1311 aa25.86■■□□□ 1.73
TMEM50B-205ENST00000459909 ADGRL2O95490 1459 aa25.85■■□□□ 1.73
TMEM50B-205ENST00000459909 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
TMEM50B-205ENST00000459909 APLP2Q06481 763 aa25.83■■□□□ 1.73
TMEM50B-205ENST00000459909 MYO5BQ9ULV0 1848 aa25.83■■□□□ 1.73
TMEM50B-205ENST00000459909 ANKRD50Q9ULJ7 1429 aa25.82■■□□□ 1.72
TMEM50B-205ENST00000459909 SETD5Q9C0A6 1442 aa25.81■■□□□ 1.72
TMEM50B-205ENST00000459909 NUTM2DQ5VT03 806 aaPredicted RBP25.81■■□□□ 1.72
TMEM50B-205ENST00000459909 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
TMEM50B-205ENST00000459909 DCCP43146 1447 aa25.8■■□□□ 1.72
TMEM50B-205ENST00000459909 RBM6P78332 1123 aaKnown RBP25.78■■□□□ 1.72
TMEM50B-205ENST00000459909 TRPM2O94759 1503 aa25.78■■□□□ 1.72
TMEM50B-205ENST00000459909 ASXL1Q8IXJ9 1541 aa25.78■■□□□ 1.72
TMEM50B-205ENST00000459909 LRRC59Q96AG4 307 aaKnown RBP25.77■■□□□ 1.72
TMEM50B-205ENST00000459909 RGS12O14924 1447 aa25.77■■□□□ 1.72
TMEM50B-205ENST00000459909 QTRT2Q9H974 415 aaKnown RBP25.76■■□□□ 1.71
TMEM50B-205ENST00000459909 PTPRUQ92729 1446 aa25.76■■□□□ 1.71
TMEM50B-205ENST00000459909 C8orf37Q96NL8 207 aa25.74■■□□□ 1.71
TMEM50B-205ENST00000459909 MST1RQ04912 1400 aa25.72■■□□□ 1.71
TMEM50B-205ENST00000459909 SRCAPQ6ZRS2 3230 aa25.69■■□□□ 1.7
TMEM50B-205ENST00000459909 NHSL1Q5SYE7 1610 aa25.69■■□□□ 1.7
TMEM50B-205ENST00000459909 PNPLA6Q8IY17 1366 aa25.69■■□□□ 1.7
TMEM50B-205ENST00000459909 NGLY1Q96IV0 654 aa25.68■■□□□ 1.7
TMEM50B-205ENST00000459909 UNC13BO14795 1591 aa25.67■■□□□ 1.7
TMEM50B-205ENST00000459909 FAM50AQ14320 339 aaKnown RBP25.67■■□□□ 1.7
TMEM50B-205ENST00000459909 ATAD2Q6PL18 1390 aa25.65■■□□□ 1.7
TMEM50B-205ENST00000459909 XRN1Q8IZH2 1706 aaKnown RBP25.64■■□□□ 1.7
TMEM50B-205ENST00000459909 FOXD1Q16676 465 aa25.64■■□□□ 1.7
TMEM50B-205ENST00000459909 E9PCH4 1651 aa25.64■■□□□ 1.69
TMEM50B-205ENST00000459909 DDX17Q92841 729 aaKnown RBP25.62■■□□□ 1.69
TMEM50B-205ENST00000459909 SETBP1Q9Y6X0 1596 aa25.61■■□□□ 1.69
TMEM50B-205ENST00000459909 ADAMTS2O95450 1211 aa25.6■■□□□ 1.69
TMEM50B-205ENST00000459909 ADGRL3Q9HAR2 1447 aa25.6■■□□□ 1.69
TMEM50B-205ENST00000459909 ZRANB1Q9UGI0 708 aa25.59■■□□□ 1.69
TMEM50B-205ENST00000459909 NRXN3Q9Y4C0 1643 aa25.58■■□□□ 1.69
TMEM50B-205ENST00000459909 METP08581 1390 aa25.57■■□□□ 1.68
TMEM50B-205ENST00000459909 IQGAP3Q86VI3 1631 aa25.56■■□□□ 1.68
TMEM50B-205ENST00000459909 USP21Q9UK80 565 aa25.56■■□□□ 1.68
TMEM50B-205ENST00000459909 TRPC5Q9UL62 973 aaPredicted RBP25.56■■□□□ 1.68
TMEM50B-205ENST00000459909 NUP155O75694 1391 aa25.53■■□□□ 1.68
TMEM50B-205ENST00000459909 C1orf167Q5SNV9 1468 aa25.53■■□□□ 1.68
TMEM50B-205ENST00000459909 FNBP4Q8N3X1 1017 aaPredicted RBP25.52■■□□□ 1.68
TMEM50B-205ENST00000459909 ZNF326Q5BKZ1 582 aaKnown RBP25.51■■□□□ 1.67
TMEM50B-205ENST00000459909 SOS2Q07890 1332 aaPredicted RBP25.51■■□□□ 1.67
TMEM50B-205ENST00000459909 ROCK1Q13464 1354 aa25.51■■□□□ 1.67
TMEM50B-205ENST00000459909 PTCH1Q13635 1447 aa25.5■■□□□ 1.67
TMEM50B-205ENST00000459909 CCDC125Q86Z20 511 aa25.5■■□□□ 1.67
TMEM50B-205ENST00000459909 ATRNO75882 1429 aa25.48■■□□□ 1.67
TMEM50B-205ENST00000459909 LAMC1P11047 1609 aa25.48■■□□□ 1.67
TMEM50B-205ENST00000459909 NALCNQ8IZF0 1738 aa25.47■■□□□ 1.67
TMEM50B-205ENST00000459909 ORAI2Q96SN7 254 aa25.44■■□□□ 1.66
TMEM50B-205ENST00000459909 NEXMIFQ5QGS0 1516 aa25.38■■□□□ 1.65
TMEM50B-205ENST00000459909 COL22A1Q8NFW1 1626 aaPredicted RBP25.37■■□□□ 1.65
TMEM50B-205ENST00000459909 EP400Q96L91 3159 aa25.37■■□□□ 1.65
TMEM50B-205ENST00000459909 BCL9LQ86UU0 1499 aa25.37■■□□□ 1.65
TMEM50B-205ENST00000459909 SPHKAPQ2M3C7 1700 aa25.37■■□□□ 1.65
TMEM50B-205ENST00000459909 MYOM2P54296 1465 aa25.36■■□□□ 1.65
TMEM50B-205ENST00000459909 ROBO2Q9HCK4 1378 aa25.36■■□□□ 1.65
TMEM50B-205ENST00000459909 GJD4Q96KN9 370 aaPredicted RBP25.35■■□□□ 1.65
TMEM50B-205ENST00000459909 NPHP3Q7Z494 1330 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms