RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 EXOC6Q8TAG9 804 aa12.01□□□□□ -0.49
MCF2L2-204ENST00000459750 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
MCF2L2-204ENST00000459750 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
MCF2L2-204ENST00000459750 YEATS2Q9ULM3 1422 aa12.01□□□□□ -0.49
MCF2L2-204ENST00000459750 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
MCF2L2-204ENST00000459750 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
MCF2L2-204ENST00000459750 PLXNC1O60486 1568 aa12□□□□□ -0.49
MCF2L2-204ENST00000459750 FBLN1P23142 703 aa12□□□□□ -0.49
MCF2L2-204ENST00000459750 TRPM1Q7Z4N2 1603 aa12□□□□□ -0.49
MCF2L2-204ENST00000459750 PKNOX2Q96KN3 472 aa12□□□□□ -0.49
MCF2L2-204ENST00000459750 MAGI2Q86UL8 1455 aa11.99□□□□□ -0.49
MCF2L2-204ENST00000459750 CLTCL1P53675 1640 aa11.99□□□□□ -0.49
MCF2L2-204ENST00000459750 NUTM2FA1L443 756 aa11.99□□□□□ -0.49
MCF2L2-204ENST00000459750 PRDM15P57071 1507 aaPredicted RBP11.98□□□□□ -0.49
MCF2L2-204ENST00000459750 SRPK2P78362 688 aaKnown RBP11.98□□□□□ -0.49
MCF2L2-204ENST00000459750 AMER1Q5JTC6 1135 aaPredicted RBP11.98□□□□□ -0.49
MCF2L2-204ENST00000459750 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
MCF2L2-204ENST00000459750 APAF1O14727 1248 aa11.98□□□□□ -0.49
MCF2L2-204ENST00000459750 BRD4O60885 1362 aaPredicted RBP11.98□□□□□ -0.49
MCF2L2-204ENST00000459750 RTEL1-TNFRSF6BF6WH68 1400 aa11.98□□□□□ -0.49
MCF2L2-204ENST00000459750 NPATQ14207 1427 aa11.97□□□□□ -0.49
MCF2L2-204ENST00000459750 COL17A1Q9UMD9 1497 aaPredicted RBP11.97□□□□□ -0.49
MCF2L2-204ENST00000459750 PPM1GO15355 546 aaPredicted RBP11.97□□□□□ -0.49
MCF2L2-204ENST00000459750 GPRASP1Q5JY77 1395 aa11.97□□□□□ -0.49
MCF2L2-204ENST00000459750 ZNF518AQ6AHZ1 1483 aa11.97□□□□□ -0.49
MCF2L2-204ENST00000459750 CENPJQ9HC77 1338 aaPredicted RBP11.97□□□□□ -0.49
MCF2L2-204ENST00000459750 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
MCF2L2-204ENST00000459750 C20orf194Q5TEA3 1177 aa11.96□□□□□ -0.49
MCF2L2-204ENST00000459750 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
MCF2L2-204ENST00000459750 MORC1Q86VD1 984 aa11.95□□□□□ -0.5
MCF2L2-204ENST00000459750 POGKQ9P215 609 aa11.95□□□□□ -0.5
MCF2L2-204ENST00000459750 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
MCF2L2-204ENST00000459750 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
MCF2L2-204ENST00000459750 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
MCF2L2-204ENST00000459750 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
MCF2L2-204ENST00000459750 TSPOAP1O95153 1857 aa11.94□□□□□ -0.5
MCF2L2-204ENST00000459750 CDCA8Q53HL2 280 aa11.93□□□□□ -0.5
MCF2L2-204ENST00000459750 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
MCF2L2-204ENST00000459750 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
MCF2L2-204ENST00000459750 SCAF11Q99590 1463 aaKnown RBP11.93□□□□□ -0.5
MCF2L2-204ENST00000459750 KIDINS220Q9ULH0 1771 aa11.93□□□□□ -0.5
MCF2L2-204ENST00000459750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.92□□□□□ -0.5
MCF2L2-204ENST00000459750 PTPRTO14522 1441 aa11.92□□□□□ -0.5
MCF2L2-204ENST00000459750 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
MCF2L2-204ENST00000459750 PRAM1Q96QH2 718 aa11.92□□□□□ -0.5
MCF2L2-204ENST00000459750 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
MCF2L2-204ENST00000459750 SMG6Q86US8 1419 aaKnown RBP11.92□□□□□ -0.5
MCF2L2-204ENST00000459750 CEP152O94986 1710 aa11.92□□□□□ -0.5
MCF2L2-204ENST00000459750 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
MCF2L2-204ENST00000459750 TRPM2O94759 1503 aa11.91□□□□□ -0.5
MCF2L2-204ENST00000459750 SOX12O15370 315 aa11.91□□□□□ -0.5
MCF2L2-204ENST00000459750 CEBPAP49715 358 aaPredicted RBP11.91□□□□□ -0.5
MCF2L2-204ENST00000459750 LRPPRCP42704 1394 aaKnown RBP11.91□□□□□ -0.5
MCF2L2-204ENST00000459750 U2SURPO15042 1029 aaKnown RBP11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 EIF3AQ14152 1382 aaKnown RBP11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 POLR1AO95602 1720 aaPredicted RBP11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 SPHKAPQ2M3C7 1700 aa11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 INO80Q9ULG1 1556 aaPredicted RBP11.9□□□□□ -0.5
MCF2L2-204ENST00000459750 MTHFSP49914 203 aa11.9□□□□□ -0.51
MCF2L2-204ENST00000459750 PLEKHH1Q9ULM0 1364 aa11.9□□□□□ -0.51
MCF2L2-204ENST00000459750 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
MCF2L2-204ENST00000459750 PPRC1Q5VV67 1664 aaKnown RBP11.89□□□□□ -0.51
MCF2L2-204ENST00000459750 MADDQ8WXG6 1647 aa11.89□□□□□ -0.51
MCF2L2-204ENST00000459750 MSH5O43196 834 aa11.88□□□□□ -0.51
MCF2L2-204ENST00000459750 BCAR3O75815 825 aa11.88□□□□□ -0.51
MCF2L2-204ENST00000459750 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
MCF2L2-204ENST00000459750 NSD3Q9BZ95 1437 aa11.88□□□□□ -0.51
MCF2L2-204ENST00000459750 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
MCF2L2-204ENST00000459750 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
MCF2L2-204ENST00000459750 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
MCF2L2-204ENST00000459750 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
MCF2L2-204ENST00000459750 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
MCF2L2-204ENST00000459750 TET3O43151 1660 aa11.86□□□□□ -0.51
MCF2L2-204ENST00000459750 FRMPD1Q5SYB0 1578 aa11.86□□□□□ -0.51
MCF2L2-204ENST00000459750 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
MCF2L2-204ENST00000459750 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
MCF2L2-204ENST00000459750 EFCAB6Q5THR3 1501 aa11.85□□□□□ -0.51
MCF2L2-204ENST00000459750 MROH2AA6NES4 1674 aa11.85□□□□□ -0.51
MCF2L2-204ENST00000459750 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
MCF2L2-204ENST00000459750 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
MCF2L2-204ENST00000459750 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
MCF2L2-204ENST00000459750 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
MCF2L2-204ENST00000459750 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
MCF2L2-204ENST00000459750 EIF2AK4Q9P2K8 1649 aaKnown RBP11.84□□□□□ -0.51
MCF2L2-204ENST00000459750 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
MCF2L2-204ENST00000459750 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
MCF2L2-204ENST00000459750 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
MCF2L2-204ENST00000459750 ARAP3Q8WWN8 1544 aa11.83□□□□□ -0.52
MCF2L2-204ENST00000459750 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
MCF2L2-204ENST00000459750 DUSP27Q5VZP5 1158 aa11.82□□□□□ -0.52
MCF2L2-204ENST00000459750 TNNQ9UQP3 1299 aa11.82□□□□□ -0.52
MCF2L2-204ENST00000459750 RGS3P49796 1198 aa11.82□□□□□ -0.52
MCF2L2-204ENST00000459750 SLC26A8Q96RN1 970 aa11.82□□□□□ -0.52
MCF2L2-204ENST00000459750 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
MCF2L2-204ENST00000459750 ABCC3O15438 1527 aa11.81□□□□□ -0.52
MCF2L2-204ENST00000459750 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
MCF2L2-204ENST00000459750 CDK19Q9BWU1 502 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms