RNA–Protein interactions for RNA: ENST00000458604.6

PSMC6-202, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-202ENST00000458604 SPTLC1O15269 473 aa13.98□□□□□ -0.17
PSMC6-202ENST00000458604 PPP1R15AO75807 674 aaPredicted RBP13.98□□□□□ -0.17
PSMC6-202ENST00000458604 POM121CA8CG34 1229 aa13.97□□□□□ -0.17
PSMC6-202ENST00000458604 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
PSMC6-202ENST00000458604 CD46P15529 392 aa13.95□□□□□ -0.18
PSMC6-202ENST00000458604 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
PSMC6-202ENST00000458604 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
PSMC6-202ENST00000458604 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
PSMC6-202ENST00000458604 GLMNQ92990 594 aa13.94□□□□□ -0.18
PSMC6-202ENST00000458604 FAM163AQ96GL9 167 aaPredicted RBP13.94□□□□□ -0.18
PSMC6-202ENST00000458604 PRSS12P56730 875 aa13.93□□□□□ -0.18
PSMC6-202ENST00000458604 LCE2DQ5TA82 110 aaPredicted RBP13.93□□□□□ -0.18
PSMC6-202ENST00000458604 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
PSMC6-202ENST00000458604 GZF1Q9H116 711 aaPredicted RBP13.93□□□□□ -0.18
PSMC6-202ENST00000458604 TBC1D2BQ9UPU7 963 aa13.93□□□□□ -0.18
PSMC6-202ENST00000458604 ABL2P42684 1182 aa13.92□□□□□ -0.18
PSMC6-202ENST00000458604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
PSMC6-202ENST00000458604 QPCTQ16769 361 aa13.91□□□□□ -0.18
PSMC6-202ENST00000458604 TMCO4Q5TGY1 634 aa13.91□□□□□ -0.18
PSMC6-202ENST00000458604 ZDHHC16Q969W1 377 aa13.91□□□□□ -0.18
PSMC6-202ENST00000458604 FAM198AQ9UFP1 575 aa13.91□□□□□ -0.18
PSMC6-202ENST00000458604 LILRB3O75022 631 aa13.9□□□□□ -0.18
PSMC6-202ENST00000458604 WWC1Q8IX03 1113 aa13.9□□□□□ -0.18
PSMC6-202ENST00000458604 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
PSMC6-202ENST00000458604 RCCD1A6NED2 376 aa13.89□□□□□ -0.19
PSMC6-202ENST00000458604 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
PSMC6-202ENST00000458604 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
PSMC6-202ENST00000458604 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
PSMC6-202ENST00000458604 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
PSMC6-202ENST00000458604 RTL5Q5HYW3 569 aaPredicted RBP13.87□□□□□ -0.19
PSMC6-202ENST00000458604 EYA1Q99502 592 aa13.87□□□□□ -0.19
PSMC6-202ENST00000458604 GJA5P36382 358 aa13.86□□□□□ -0.19
PSMC6-202ENST00000458604 MFAP1P55081 439 aaKnown RBP13.86□□□□□ -0.19
PSMC6-202ENST00000458604 ZNF454Q8N9F8 522 aa13.86□□□□□ -0.19
PSMC6-202ENST00000458604 PCDHB15Q9Y5E8 787 aa13.86□□□□□ -0.19
PSMC6-202ENST00000458604 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
PSMC6-202ENST00000458604 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
PSMC6-202ENST00000458604 AP1G2O75843 785 aa13.84□□□□□ -0.19
PSMC6-202ENST00000458604 USP17L8P0C7I0 530 aa13.84□□□□□ -0.19
PSMC6-202ENST00000458604 NDUFV2P19404 249 aa13.84□□□□□ -0.19
PSMC6-202ENST00000458604 ADAMTS19Q8TE59 1207 aa13.84□□□□□ -0.19
PSMC6-202ENST00000458604 NUTM1Q86Y26 1132 aa13.83□□□□□ -0.2
PSMC6-202ENST00000458604 GJD4Q96KN9 370 aaPredicted RBP13.83□□□□□ -0.2
PSMC6-202ENST00000458604 PRM3Q9NNZ6 103 aa13.83□□□□□ -0.2
PSMC6-202ENST00000458604 PBXIP1Q96AQ6 731 aa13.81□□□□□ -0.2
PSMC6-202ENST00000458604 C3orf80F5H4A9 247 aa13.8□□□□□ -0.2
PSMC6-202ENST00000458604 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
PSMC6-202ENST00000458604 PDE4CQ08493 712 aa13.8□□□□□ -0.2
PSMC6-202ENST00000458604 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
PSMC6-202ENST00000458604 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
PSMC6-202ENST00000458604 GPR37L1O60883 481 aa13.79□□□□□ -0.2
PSMC6-202ENST00000458604 CABLES1Q8TDN4 633 aa13.79□□□□□ -0.2
PSMC6-202ENST00000458604 HDGFL1Q5TGJ6 251 aa13.78□□□□□ -0.2
PSMC6-202ENST00000458604 COL9A1P20849 921 aa13.77□□□□□ -0.21
PSMC6-202ENST00000458604 CFAP70Q5T0N1 1121 aa13.77□□□□□ -0.21
PSMC6-202ENST00000458604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.76□□□□□ -0.21
PSMC6-202ENST00000458604 FOXD4L5Q5VV16 416 aaPredicted RBP13.76□□□□□ -0.21
PSMC6-202ENST00000458604 FOXD4L4Q8WXT5 416 aaPredicted RBP13.76□□□□□ -0.21
PSMC6-202ENST00000458604 TSKSQ9UJT2 592 aa13.76□□□□□ -0.21
PSMC6-202ENST00000458604 PRPF38BQ5VTL8 546 aaKnown RBP13.75□□□□□ -0.21
PSMC6-202ENST00000458604 NDUFB9Q9Y6M9 179 aa13.75□□□□□ -0.21
PSMC6-202ENST00000458604 NUDT7P0C024 238 aa13.74□□□□□ -0.21
PSMC6-202ENST00000458604 DNAJB2P25686 324 aa13.74□□□□□ -0.21
PSMC6-202ENST00000458604 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.21
PSMC6-202ENST00000458604 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
PSMC6-202ENST00000458604 USTQ9Y2C2 406 aa13.74□□□□□ -0.21
PSMC6-202ENST00000458604 NUTM2BA6NNL0 878 aaPredicted RBP13.73□□□□□ -0.21
PSMC6-202ENST00000458604 NUTM2EB1AL46 878 aaPredicted RBP13.73□□□□□ -0.21
PSMC6-202ENST00000458604 BRD1O95696 1058 aa13.73□□□□□ -0.21
PSMC6-202ENST00000458604 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
PSMC6-202ENST00000458604 NUDT18Q6ZVK8 323 aa13.73□□□□□ -0.21
PSMC6-202ENST00000458604 NUTM2AQ8IVF1 878 aaPredicted RBP13.73□□□□□ -0.21
PSMC6-202ENST00000458604 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
PSMC6-202ENST00000458604 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
PSMC6-202ENST00000458604 RFX1P22670 979 aa13.72□□□□□ -0.21
PSMC6-202ENST00000458604 KCNA1Q09470 495 aa13.72□□□□□ -0.21
PSMC6-202ENST00000458604 ZNF428Q96B54 188 aa13.72□□□□□ -0.21
PSMC6-202ENST00000458604 TRIM34Q9BYJ4 488 aa13.72□□□□□ -0.21
PSMC6-202ENST00000458604 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
PSMC6-202ENST00000458604 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
PSMC6-202ENST00000458604 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
PSMC6-202ENST00000458604 KDM4AO75164 1064 aa13.69□□□□□ -0.22
PSMC6-202ENST00000458604 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
PSMC6-202ENST00000458604 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
PSMC6-202ENST00000458604 ARSIQ5FYB1 569 aa13.68□□□□□ -0.22
PSMC6-202ENST00000458604 CARNS1A5YM72 827 aa13.67□□□□□ -0.22
PSMC6-202ENST00000458604 CTDSPL2Q05D32 466 aa13.67□□□□□ -0.22
PSMC6-202ENST00000458604 TATDN2Q93075 761 aa13.67□□□□□ -0.22
PSMC6-202ENST00000458604 HOXA2O43364 376 aa13.66□□□□□ -0.22
PSMC6-202ENST00000458604 ALG2Q9H553 416 aa13.66□□□□□ -0.22
PSMC6-202ENST00000458604 PCDHGC3Q9UN70 934 aa13.66□□□□□ -0.22
PSMC6-202ENST00000458604 CSB-PGBD3P0DP91 1061 aa13.65□□□□□ -0.22
PSMC6-202ENST00000458604 VAC14Q08AM6 782 aa13.65□□□□□ -0.22
PSMC6-202ENST00000458604 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
PSMC6-202ENST00000458604 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
PSMC6-202ENST00000458604 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
PSMC6-202ENST00000458604 FDX1P10109 184 aa13.64□□□□□ -0.23
PSMC6-202ENST00000458604 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
PSMC6-202ENST00000458604 RDH13Q8NBN7 331 aa13.64□□□□□ -0.23
PSMC6-202ENST00000458604 BCL2L12Q9HB09 334 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms