RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 PIK3C2BO00750 1634 aa12.69□□□□□ -0.38
CDC42EP3-204ENST00000457889 KIF1BO60333 1816 aa12.68□□□□□ -0.38
CDC42EP3-204ENST00000457889 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
CDC42EP3-204ENST00000457889 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
CDC42EP3-204ENST00000457889 ADGRB3O60242 1522 aa12.67□□□□□ -0.38
CDC42EP3-204ENST00000457889 PREX1Q8TCU6 1659 aa12.67□□□□□ -0.38
CDC42EP3-204ENST00000457889 ERVK-7P63135 1459 aa12.67□□□□□ -0.38
CDC42EP3-204ENST00000457889 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
CDC42EP3-204ENST00000457889 SPATA31D1Q6ZQQ2 1576 aa12.67□□□□□ -0.38
CDC42EP3-204ENST00000457889 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
CDC42EP3-204ENST00000457889 ARID4BQ4LE39 1312 aaPredicted RBP12.66□□□□□ -0.38
CDC42EP3-204ENST00000457889 SYNMO15061 1565 aa12.66□□□□□ -0.38
CDC42EP3-204ENST00000457889 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
CDC42EP3-204ENST00000457889 MYOM2P54296 1465 aa12.65□□□□□ -0.38
CDC42EP3-204ENST00000457889 PRAG1Q86YV5 1406 aa12.65□□□□□ -0.38
CDC42EP3-204ENST00000457889 RPGRIP1LQ68CZ1 1315 aa12.64□□□□□ -0.39
CDC42EP3-204ENST00000457889 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
CDC42EP3-204ENST00000457889 LAMC1P11047 1609 aa12.62□□□□□ -0.39
CDC42EP3-204ENST00000457889 UGGT1Q9NYU2 1555 aa12.62□□□□□ -0.39
CDC42EP3-204ENST00000457889 ZMYM3Q14202 1370 aa12.62□□□□□ -0.39
CDC42EP3-204ENST00000457889 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDC42EP3-204ENST00000457889 GPRASP1Q5JY77 1395 aa12.61□□□□□ -0.39
CDC42EP3-204ENST00000457889 NBPF8Q3BBV2 869 aa12.61□□□□□ -0.39
CDC42EP3-204ENST00000457889 NRXN1Q9ULB1 1477 aa12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 IFT172Q9UG01 1749 aa12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 HAX1O00165 279 aa12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 MLECQ14165 292 aa12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 RGL3Q3MIN7 710 aa12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 KDM5AP29375 1690 aaKnown RBP12.6□□□□□ -0.39
CDC42EP3-204ENST00000457889 KIAA1210Q9ULL0 1709 aa12.59□□□□□ -0.39
CDC42EP3-204ENST00000457889 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
CDC42EP3-204ENST00000457889 FER1L4A9Z1Z3 1794 aa12.59□□□□□ -0.39
CDC42EP3-204ENST00000457889 ZFYVE9O95405 1425 aa12.59□□□□□ -0.39
CDC42EP3-204ENST00000457889 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
CDC42EP3-204ENST00000457889 CFAP65Q6ZU64 1925 aaKnown RBP12.58□□□□□ -0.4
CDC42EP3-204ENST00000457889 TMEM131LA2VDJ0 1609 aa12.58□□□□□ -0.4
CDC42EP3-204ENST00000457889 NLRP1Q9C000 1473 aa12.58□□□□□ -0.4
CDC42EP3-204ENST00000457889 ROCK2O75116 1388 aaKnown RBP12.57□□□□□ -0.4
CDC42EP3-204ENST00000457889 TNRQ92752 1358 aa12.57□□□□□ -0.4
CDC42EP3-204ENST00000457889 PPLO60437 1756 aa12.57□□□□□ -0.4
CDC42EP3-204ENST00000457889 IDI1Q13907 227 aa12.57□□□□□ -0.4
CDC42EP3-204ENST00000457889 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
CDC42EP3-204ENST00000457889 ZNF326Q5BKZ1 582 aaKnown RBP12.56□□□□□ -0.4
CDC42EP3-204ENST00000457889 VGFO15240 615 aaPredicted RBP12.55□□□□□ -0.4
CDC42EP3-204ENST00000457889 NEXMIFQ5QGS0 1516 aa12.55□□□□□ -0.4
CDC42EP3-204ENST00000457889 USP47Q96K76 1375 aa12.55□□□□□ -0.4
CDC42EP3-204ENST00000457889 EVX2Q03828 476 aa12.54□□□□□ -0.4
CDC42EP3-204ENST00000457889 FBXO31Q5XUX0 539 aaPredicted RBP12.54□□□□□ -0.4
CDC42EP3-204ENST00000457889 CARD11Q9BXL7 1154 aa12.54□□□□□ -0.4
CDC42EP3-204ENST00000457889 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
CDC42EP3-204ENST00000457889 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
CDC42EP3-204ENST00000457889 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
CDC42EP3-204ENST00000457889 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
CDC42EP3-204ENST00000457889 C3P01024 1663 aa12.53□□□□□ -0.4
CDC42EP3-204ENST00000457889 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
CDC42EP3-204ENST00000457889 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
CDC42EP3-204ENST00000457889 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
CDC42EP3-204ENST00000457889 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
CDC42EP3-204ENST00000457889 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
CDC42EP3-204ENST00000457889 HDGFP51858 240 aaKnown RBP12.51□□□□□ -0.41
CDC42EP3-204ENST00000457889 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
CDC42EP3-204ENST00000457889 EIF3AQ14152 1382 aaKnown RBP12.51□□□□□ -0.41
CDC42EP3-204ENST00000457889 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
CDC42EP3-204ENST00000457889 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
CDC42EP3-204ENST00000457889 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDC42EP3-204ENST00000457889 SCAF11Q99590 1463 aaKnown RBP12.5□□□□□ -0.41
CDC42EP3-204ENST00000457889 POLR1AO95602 1720 aaPredicted RBP12.48□□□□□ -0.41
CDC42EP3-204ENST00000457889 ADGRF5Q8IZF2 1346 aa12.48□□□□□ -0.41
CDC42EP3-204ENST00000457889 MYO5BQ9ULV0 1848 aa12.48□□□□□ -0.41
CDC42EP3-204ENST00000457889 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
CDC42EP3-204ENST00000457889 RIMS1Q86UR5 1692 aaKnown RBP12.48□□□□□ -0.41
CDC42EP3-204ENST00000457889 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
CDC42EP3-204ENST00000457889 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
CDC42EP3-204ENST00000457889 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
CDC42EP3-204ENST00000457889 UBR1Q8IWV7 1749 aa12.47□□□□□ -0.41
CDC42EP3-204ENST00000457889 MYO3AQ8NEV4 1616 aa12.46□□□□□ -0.41
CDC42EP3-204ENST00000457889 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
CDC42EP3-204ENST00000457889 ADGRB1O14514 1584 aa12.45□□□□□ -0.42
CDC42EP3-204ENST00000457889 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
CDC42EP3-204ENST00000457889 SLIT1O75093 1534 aa12.45□□□□□ -0.42
CDC42EP3-204ENST00000457889 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
CDC42EP3-204ENST00000457889 SBNO2Q9Y2G9 1366 aa12.44□□□□□ -0.42
CDC42EP3-204ENST00000457889 ZNF142P52746 1687 aaPredicted RBP12.44□□□□□ -0.42
CDC42EP3-204ENST00000457889 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
CDC42EP3-204ENST00000457889 ARHGAP23Q9P227 1491 aa12.43□□□□□ -0.42
CDC42EP3-204ENST00000457889 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
CDC42EP3-204ENST00000457889 ST20-MTHFSA0A0A6YYL1 179 aa12.42□□□□□ -0.42
CDC42EP3-204ENST00000457889 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
CDC42EP3-204ENST00000457889 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
CDC42EP3-204ENST00000457889 CEP170BQ9Y4F5 1589 aaPredicted RBP12.42□□□□□ -0.42
CDC42EP3-204ENST00000457889 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
CDC42EP3-204ENST00000457889 CEBPAP49715 358 aaPredicted RBP12.41□□□□□ -0.42
CDC42EP3-204ENST00000457889 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
CDC42EP3-204ENST00000457889 PTPRMP28827 1452 aa12.4□□□□□ -0.42
CDC42EP3-204ENST00000457889 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
CDC42EP3-204ENST00000457889 EID1Q9Y6B2 187 aa12.4□□□□□ -0.42
CDC42EP3-204ENST00000457889 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
CDC42EP3-204ENST00000457889 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms