RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ZNF710Q8N1W2 664 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 RGS17Q9UGC6 210 aaPredicted RBP3.66□□□□□ -1.82
NEDD1-204ENST00000457368 ABCA6Q8N139 1617 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 MED14O60244 1454 aa3.66□□□□□ -1.82
NEDD1-204ENST00000457368 PDAP1Q13442 181 aaKnown RBP3.65□□□□□ -1.82
NEDD1-204ENST00000457368 FAM135AQ9P2D6 1515 aa3.65□□□□□ -1.82
NEDD1-204ENST00000457368 TROQ12816 1431 aaPredicted RBP3.65□□□□□ -1.83
NEDD1-204ENST00000457368 AMER1Q5JTC6 1135 aaPredicted RBP3.65□□□□□ -1.83
NEDD1-204ENST00000457368 VWDEQ8N2E2 1590 aa3.65□□□□□ -1.83
NEDD1-204ENST00000457368 AFAP1Q8N556 730 aa3.65□□□□□ -1.83
NEDD1-204ENST00000457368 PDCD7Q8N8D1 485 aaKnown RBP3.65□□□□□ -1.83
NEDD1-204ENST00000457368 ESF1Q9H501 851 aaKnown RBP3.65□□□□□ -1.83
NEDD1-204ENST00000457368 ABCC1P33527 1531 aa3.65□□□□□ -1.83
NEDD1-204ENST00000457368 MYO3AQ8NEV4 1616 aa3.65□□□□□ -1.83
NEDD1-204ENST00000457368 IER5LQ5T953 404 aa3.64□□□□□ -1.83
NEDD1-204ENST00000457368 P3H3Q8IVL6 736 aa3.64□□□□□ -1.83
NEDD1-204ENST00000457368 MYO5CQ9NQX4 1742 aa3.64□□□□□ -1.83
NEDD1-204ENST00000457368 PLXNC1O60486 1568 aa3.64□□□□□ -1.83
NEDD1-204ENST00000457368 NEURL4Q96JN8 1562 aa3.64□□□□□ -1.83
NEDD1-204ENST00000457368 CDK11AQ9UQ88 783 aaPredicted RBP3.64□□□□□ -1.83
NEDD1-204ENST00000457368 SGIP1Q9BQI5 828 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 EEA1Q15075 1411 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 STK25O00506 426 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 STK24Q9Y6E0 443 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 DEPDC5O75140 1603 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 KIAA1107Q9UPP5 1409 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 KIDINS220Q9ULH0 1771 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 DNMT1P26358 1616 aaKnown RBP3.63□□□□□ -1.83
NEDD1-204ENST00000457368 KIF14Q15058 1648 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 SLC24A1O60721 1099 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 ARHGAP5Q13017 1502 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 CDK13Q14004 1512 aaKnown RBP3.63□□□□□ -1.83
NEDD1-204ENST00000457368 FAM135BQ49AJ0 1406 aa3.63□□□□□ -1.83
NEDD1-204ENST00000457368 SYNMO15061 1565 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.62□□□□□ -1.83
NEDD1-204ENST00000457368 ZFP91Q96JP5 570 aaPredicted RBP3.62□□□□□ -1.83
NEDD1-204ENST00000457368 BCL11BQ9C0K0 894 aaPredicted RBP3.62□□□□□ -1.83
NEDD1-204ENST00000457368 CLIP1P30622 1438 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 FMN1Q68DA7 1419 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 RNF17Q9BXT8 1623 aaKnown RBP3.62□□□□□ -1.83
NEDD1-204ENST00000457368 LRRC7Q96NW7 1537 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 SAMD9LQ8IVG5 1584 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 PHF8Q9UPP1 1060 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 NLRP1Q9C000 1473 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 ITSN2Q9NZM3 1697 aa3.62□□□□□ -1.83
NEDD1-204ENST00000457368 RNF25Q96BH1 459 aaPredicted RBP3.61□□□□□ -1.83
NEDD1-204ENST00000457368 BOLA1Q9Y3E2 137 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 NPHP4O75161 1426 aaPredicted RBP3.61□□□□□ -1.83
NEDD1-204ENST00000457368 PREX2Q70Z35 1606 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 PIP4K2BP78356 416 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 POTEAQ6S8J7 498 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 A2MP01023 1474 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 PZPP20742 1482 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 PLEKHH2Q8IVE3 1493 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 ANKLE2Q86XL3 938 aa3.61□□□□□ -1.83
NEDD1-204ENST00000457368 L3MBTL3Q96JM7 780 aaPredicted RBP3.61□□□□□ -1.83
NEDD1-204ENST00000457368 TNRQ92752 1358 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 KDM5DQ9BY66 1539 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 MMRN1Q13201 1228 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 INO80Q9ULG1 1556 aaPredicted RBP3.6□□□□□ -1.83
NEDD1-204ENST00000457368 POLR1AO95602 1720 aaPredicted RBP3.6□□□□□ -1.83
NEDD1-204ENST00000457368 THEMISQ8N1K5 641 aaPredicted RBP3.6□□□□□ -1.83
NEDD1-204ENST00000457368 HS3ST6Q96QI5 342 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 ERBB3P21860 1342 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 CDC42BPBQ9Y5S2 1711 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 RTEL1-TNFRSF6BF6WH68 1400 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 CDK12Q9NYV4 1490 aaPredicted RBP3.6□□□□□ -1.83
NEDD1-204ENST00000457368 ATP7AQ04656 1500 aa3.6□□□□□ -1.83
NEDD1-204ENST00000457368 ECM2O94769 699 aaPredicted RBP3.59□□□□□ -1.83
NEDD1-204ENST00000457368 KHSRPQ92945 711 aaKnown RBP eCLIP3.59□□□□□ -1.832e-6■■■■□ 20
NEDD1-204ENST00000457368 SPAG9O60271 1321 aaKnown RBP3.59□□□□□ -1.83
NEDD1-204ENST00000457368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.59□□□□□ -1.83
NEDD1-204ENST00000457368 VARS2Q5ST30 1063 aaKnown RBP3.59□□□□□ -1.83
NEDD1-204ENST00000457368 MIA2Q96PC5 1412 aa3.59□□□□□ -1.83
NEDD1-204ENST00000457368 CLTCQ00610 1675 aaKnown RBP3.59□□□□□ -1.83
NEDD1-204ENST00000457368 SNPHO15079 494 aa3.59□□□□□ -1.84
NEDD1-204ENST00000457368 ANKRD13DQ6ZTN6 518 aa3.59□□□□□ -1.84
NEDD1-204ENST00000457368 UPF1Q92900 1129 aaKnown RBP eCLIP3.59□□□□□ -1.84
NEDD1-204ENST00000457368 CCDC18Q5T9S5 1454 aa3.58□□□□□ -1.84
NEDD1-204ENST00000457368 LRRC9Q6ZRR7 1453 aa3.58□□□□□ -1.84
NEDD1-204ENST00000457368 DHX29Q7Z478 1369 aaKnown RBP3.58□□□□□ -1.84
NEDD1-204ENST00000457368 GPATCH8Q9UKJ3 1502 aaKnown RBP3.58□□□□□ -1.84
NEDD1-204ENST00000457368 ARHGAP23Q9P227 1491 aa3.58□□□□□ -1.84
NEDD1-204ENST00000457368 AXIN2Q9Y2T1 843 aa3.58□□□□□ -1.84
NEDD1-204ENST00000457368 ARHGAP35Q9NRY4 1499 aa3.58□□□□□ -1.84
NEDD1-204ENST00000457368 FGD6Q6ZV73 1430 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 SUPT6HQ7KZ85 1726 aaKnown RBP3.57□□□□□ -1.84
NEDD1-204ENST00000457368 IQGAP1P46940 1657 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 POTEB3A0JP26 581 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 RIOK3O14730 519 aaKnown RBP3.57□□□□□ -1.84
NEDD1-204ENST00000457368 POTEBQ6S5H4 581 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 MYT1LQ9UL68 1186 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 UGGT1Q9NYU2 1555 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 CAMSAP2Q08AD1 1489 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 CASKIN1Q8WXD9 1431 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 ZC3H13Q5T200 1668 aaKnown RBP3.57□□□□□ -1.84
NEDD1-204ENST00000457368 TMEM92Q6UXU6 159 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 SLIT1O75093 1534 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 SYCP2Q9BX26 1530 aa3.57□□□□□ -1.84
NEDD1-204ENST00000457368 STRCP1A6NGW2 1772 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms