RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 EFCAB5A4FU69 1503 aa5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 HSP90AA1P07900 732 aaKnown RBP5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 TMEM51Q9NW97 253 aa5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 HECW1Q76N89 1606 aa5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 RGL3Q3MIN7 710 aa5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 TARBP1Q13395 1621 aaKnown RBP5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 ZBTB7CA1YPR0 619 aa5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 VGLL3A8MV65 326 aa5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 C17orf53Q8N3J3 647 aaPredicted RBP5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 CHMP4BQ9H444 224 aaKnown RBP5.85□□□□□ -1.47
DEPDC1-202ENST00000456315 BLMP54132 1417 aaPredicted RBP5.84□□□□□ -1.47
DEPDC1-202ENST00000456315 UGGT2Q9NYU1 1516 aa5.84□□□□□ -1.47
DEPDC1-202ENST00000456315 GRIN2BQ13224 1484 aa5.84□□□□□ -1.47
DEPDC1-202ENST00000456315 FOXD4L1Q9NU39 408 aa5.84□□□□□ -1.47
DEPDC1-202ENST00000456315 TNPO1Q92973 898 aaKnown RBP5.84□□□□□ -1.47
DEPDC1-202ENST00000456315 ZNF830Q96NB3 372 aaPredicted RBP5.84□□□□□ -1.47
DEPDC1-202ENST00000456315 ATP2B3Q16720 1220 aa5.84□□□□□ -1.47
DEPDC1-202ENST00000456315 PLA2R1Q13018 1463 aa5.84□□□□□ -1.48
DEPDC1-202ENST00000456315 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.48
DEPDC1-202ENST00000456315 MAPK8IP2Q13387 824 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1-202ENST00000456315 NAA30Q147X3 362 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1-202ENST00000456315 PDZRN3Q9UPQ7 1066 aa5.83□□□□□ -1.48
DEPDC1-202ENST00000456315 GOLGA6L3A6NEY3 463 aa5.83□□□□□ -1.48
DEPDC1-202ENST00000456315 PDE3BQ13370 1112 aa5.83□□□□□ -1.48
DEPDC1-202ENST00000456315 CARD14Q9BXL6 1004 aa5.83□□□□□ -1.48
DEPDC1-202ENST00000456315 PPRC1Q5VV67 1664 aaKnown RBP5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 RANBP2P49792 3224 aaKnown RBP5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 INSRP06213 1382 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 KIF15Q9NS87 1388 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 CALD1Q05682 793 aaKnown RBP5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 ZDHHC9Q9Y397 364 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 RRP7AQ9Y3A4 280 aaKnown RBP5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 DNAH12Q6ZR08 3092 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 OFD1O75665 1012 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 GAS2L2Q8NHY3 880 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 RBSNQ9H1K0 784 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 E9PCH4 1651 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 PDLIM2Q96JY6 352 aa5.82□□□□□ -1.48
DEPDC1-202ENST00000456315 WDR7Q9Y4E6 1490 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 CENPJQ9HC77 1338 aaPredicted RBP5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 UNC80Q8N2C7 3258 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 SSFA2P28290 1259 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 PPP2R1AP30153 589 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 CHD1O14646 1710 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 PLCD3Q8N3E9 789 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 PPP1R9BQ96SB3 815 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 NCOA3Q9Y6Q9 1424 aa5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 R3HCC1Q9Y3T6 440 aaKnown RBP5.81□□□□□ -1.48
DEPDC1-202ENST00000456315 PRIM1P49642 420 aaKnown RBP5.8□□□□□ -1.48
DEPDC1-202ENST00000456315 NEUROD2Q15784 382 aa5.8□□□□□ -1.48
DEPDC1-202ENST00000456315 TCOF1Q13428 1488 aaKnown RBP5.8□□□□□ -1.48
DEPDC1-202ENST00000456315 VIRMAQ69YN4 1812 aaKnown RBP5.8□□□□□ -1.48
DEPDC1-202ENST00000456315 MRE11P49959 708 aa5.8□□□□□ -1.48
DEPDC1-202ENST00000456315 SUPT6HQ7KZ85 1726 aaKnown RBP5.8□□□□□ -1.48
DEPDC1-202ENST00000456315 BBXQ8WY36 941 aaPredicted RBP5.8□□□□□ -1.48
DEPDC1-202ENST00000456315 GOLGA2Q08379 1002 aa5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 RALBP1Q15311 655 aa5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 RBM27Q9P2N5 1060 aaKnown RBP5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 GCC2Q8IWJ2 1684 aa5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 PHF23Q9BUL5 403 aaPredicted RBP5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 ZMYM4Q5VZL5 1548 aa5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 DAPK1P53355 1430 aa5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 TMEM63CQ9P1W3 806 aa5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 UHRF1BP1Q6BDS2 1440 aa5.79□□□□□ -1.48
DEPDC1-202ENST00000456315 AP5Z1O43299 807 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 RARSP54136 660 aaKnown RBP5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 POLA1P09884 1462 aaPredicted RBP5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 GAPVD1Q14C86 1478 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 MFAP1P55081 439 aaKnown RBP5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 COL9A3Q14050 684 aaPredicted RBP5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 WWC1Q8IX03 1113 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 ATAD2Q6PL18 1390 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 KIAA1107Q9UPP5 1409 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 SIRT2Q8IXJ6 389 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 ZGPATQ8N5A5 531 aaKnown RBP5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 GPT2Q8TD30 523 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 C22orf23Q9BZE7 217 aa5.78□□□□□ -1.48
DEPDC1-202ENST00000456315 RALGAPBQ86X10 1494 aa5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 A0A0C4DFX4 3053 aa5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 ZSCAN30Q86W11 494 aa5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 EIF3AQ14152 1382 aaKnown RBP5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 PDS5BQ9NTI5 1447 aa5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 EPRSP07814 1512 aaKnown RBP5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 PRG4Q92954 1404 aaPredicted RBP5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 ERCC6L2Q5T890 1561 aa5.77□□□□□ -1.49
DEPDC1-202ENST00000456315 CFAP54Q96N23 3096 aa5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 CYP2E1P05181 493 aaPredicted RBP5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 PDE4CQ08493 712 aa5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 RAB3GAP1Q15042 981 aa5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 SZT2Q5T011 3432 aa5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 SPDYE4A6NLX3 237 aa5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 TSR2Q969E8 191 aaKnown RBP5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 RNF214Q8ND24 703 aa5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 CHMP5Q9NZZ3 219 aa5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 DAXXQ9UER7 740 aaPredicted RBP5.76□□□□□ -1.49
DEPDC1-202ENST00000456315 CBX1P83916 185 aa5.75□□□□□ -1.49
DEPDC1-202ENST00000456315 LMBRD1Q9NUN5 540 aa5.75□□□□□ -1.49
DEPDC1-202ENST00000456315 TTC12Q9H892 705 aaPredicted RBP5.75□□□□□ -1.49
DEPDC1-202ENST00000456315 NUP155O75694 1391 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms