RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 KIF1BO60333 1816 aa12.84□□□□□ -0.35
VSIG4-204ENST00000455586 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
VSIG4-204ENST00000455586 AGLP35573 1532 aa12.84□□□□□ -0.35
VSIG4-204ENST00000455586 ARHGAP31Q2M1Z3 1444 aa12.83□□□□□ -0.35
VSIG4-204ENST00000455586 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
VSIG4-204ENST00000455586 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
VSIG4-204ENST00000455586 ADGRB3O60242 1522 aa12.83□□□□□ -0.36
VSIG4-204ENST00000455586 ZC3H13Q5T200 1668 aaKnown RBP12.82□□□□□ -0.36
VSIG4-204ENST00000455586 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
VSIG4-204ENST00000455586 TMEM132EQ6IEE7 984 aa12.81□□□□□ -0.36
VSIG4-204ENST00000455586 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
VSIG4-204ENST00000455586 TESK2Q96S53 571 aa12.8□□□□□ -0.36
VSIG4-204ENST00000455586 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
VSIG4-204ENST00000455586 ZMYM3Q14202 1370 aa12.8□□□□□ -0.36
VSIG4-204ENST00000455586 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
VSIG4-204ENST00000455586 ERVK-7P63135 1459 aa12.79□□□□□ -0.36
VSIG4-204ENST00000455586 SLC52A1Q9NWF4 448 aa12.79□□□□□ -0.36
VSIG4-204ENST00000455586 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
VSIG4-204ENST00000455586 MYOM2P54296 1465 aa12.79□□□□□ -0.36
VSIG4-204ENST00000455586 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
VSIG4-204ENST00000455586 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
VSIG4-204ENST00000455586 DISP3Q9P2K9 1392 aa12.78□□□□□ -0.36
VSIG4-204ENST00000455586 IQGAP1P46940 1657 aa12.78□□□□□ -0.36
VSIG4-204ENST00000455586 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.36
VSIG4-204ENST00000455586 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
VSIG4-204ENST00000455586 MYO5BQ9ULV0 1848 aa12.76□□□□□ -0.37
VSIG4-204ENST00000455586 CCDC184Q52MB2 194 aa12.75□□□□□ -0.37
VSIG4-204ENST00000455586 PPLO60437 1756 aa12.75□□□□□ -0.37
VSIG4-204ENST00000455586 PIK3C2GO75747 1445 aa12.75□□□□□ -0.37
VSIG4-204ENST00000455586 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
VSIG4-204ENST00000455586 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
VSIG4-204ENST00000455586 NEXMIFQ5QGS0 1516 aa12.74□□□□□ -0.37
VSIG4-204ENST00000455586 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
VSIG4-204ENST00000455586 SCAF11Q99590 1463 aaKnown RBP12.74□□□□□ -0.37
VSIG4-204ENST00000455586 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
VSIG4-204ENST00000455586 TMEM131LA2VDJ0 1609 aa12.73□□□□□ -0.37
VSIG4-204ENST00000455586 TMF1P82094 1093 aa12.72□□□□□ -0.37
VSIG4-204ENST00000455586 STK26Q9P289 416 aa12.72□□□□□ -0.37
VSIG4-204ENST00000455586 KTN1Q86UP2 1357 aaKnown RBP12.72□□□□□ -0.37
VSIG4-204ENST00000455586 MRS2Q9HD23 443 aa12.71□□□□□ -0.37
VSIG4-204ENST00000455586 EIF3AQ14152 1382 aaKnown RBP12.71□□□□□ -0.37
VSIG4-204ENST00000455586 SPATA31D1Q6ZQQ2 1576 aa12.71□□□□□ -0.37
VSIG4-204ENST00000455586 SAFB2Q14151 953 aaKnown RBP eCLIP12.71□□□□□ -0.37
VSIG4-204ENST00000455586 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
VSIG4-204ENST00000455586 TNRQ92752 1358 aa12.69□□□□□ -0.38
VSIG4-204ENST00000455586 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
VSIG4-204ENST00000455586 SETBP1Q9Y6X0 1596 aa12.68□□□□□ -0.38
VSIG4-204ENST00000455586 HNRNPUQ00839 825 aaKnown RBP eCLIP12.68□□□□□ -0.38
VSIG4-204ENST00000455586 PANK3Q9H999 370 aa12.68□□□□□ -0.38
VSIG4-204ENST00000455586 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
VSIG4-204ENST00000455586 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
VSIG4-204ENST00000455586 MYO3AQ8NEV4 1616 aa12.66□□□□□ -0.38
VSIG4-204ENST00000455586 RALBP1Q15311 655 aa12.66□□□□□ -0.38
VSIG4-204ENST00000455586 CDCA8Q53HL2 280 aa12.65□□□□□ -0.38
VSIG4-204ENST00000455586 BCANQ96GW7 911 aa12.65□□□□□ -0.38
VSIG4-204ENST00000455586 CC2D1BQ5T0F9 858 aaKnown RBP12.64□□□□□ -0.39
VSIG4-204ENST00000455586 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
VSIG4-204ENST00000455586 PER1O15534 1290 aaPredicted RBP12.64□□□□□ -0.39
VSIG4-204ENST00000455586 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
VSIG4-204ENST00000455586 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
VSIG4-204ENST00000455586 MYBBP1AQ9BQG0 1328 aaKnown RBP12.64□□□□□ -0.39
VSIG4-204ENST00000455586 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
VSIG4-204ENST00000455586 KDM5AP29375 1690 aaKnown RBP12.63□□□□□ -0.39
VSIG4-204ENST00000455586 PARD3Q8TEW0 1356 aa12.63□□□□□ -0.39
VSIG4-204ENST00000455586 SENP3-EIF4A1A0A087X0R7 540 aa12.63□□□□□ -0.39
VSIG4-204ENST00000455586 MYT1Q01538 1121 aa12.63□□□□□ -0.39
VSIG4-204ENST00000455586 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
VSIG4-204ENST00000455586 LTKP29376 864 aa12.62□□□□□ -0.39
VSIG4-204ENST00000455586 FER1L4A9Z1Z3 1794 aa12.62□□□□□ -0.39
VSIG4-204ENST00000455586 C3P01024 1663 aa12.62□□□□□ -0.39
VSIG4-204ENST00000455586 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
VSIG4-204ENST00000455586 SBNO2Q9Y2G9 1366 aa12.61□□□□□ -0.39
VSIG4-204ENST00000455586 MYOM1P52179 1685 aa12.61□□□□□ -0.39
VSIG4-204ENST00000455586 PTPRMP28827 1452 aa12.61□□□□□ -0.39
VSIG4-204ENST00000455586 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
VSIG4-204ENST00000455586 WAPLQ7Z5K2 1190 aa12.6□□□□□ -0.39
VSIG4-204ENST00000455586 SUPT16HQ9Y5B9 1047 aaKnown RBP12.6□□□□□ -0.39
VSIG4-204ENST00000455586 ZBED9Q6R2W3 1325 aa12.6□□□□□ -0.39
VSIG4-204ENST00000455586 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
VSIG4-204ENST00000455586 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
VSIG4-204ENST00000455586 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
VSIG4-204ENST00000455586 TMEM2Q9UHN6 1383 aa12.59□□□□□ -0.39
VSIG4-204ENST00000455586 METP08581 1390 aa12.59□□□□□ -0.39
VSIG4-204ENST00000455586 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
VSIG4-204ENST00000455586 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
VSIG4-204ENST00000455586 POGKQ9P215 609 aa12.59□□□□□ -0.39
VSIG4-204ENST00000455586 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
VSIG4-204ENST00000455586 NLRP13Q86W25 1043 aa12.58□□□□□ -0.4
VSIG4-204ENST00000455586 SLC26A8Q96RN1 970 aa12.58□□□□□ -0.4
VSIG4-204ENST00000455586 UBR1Q8IWV7 1749 aa12.58□□□□□ -0.4
VSIG4-204ENST00000455586 QRICH2Q9H0J4 1663 aa12.57□□□□□ -0.4
VSIG4-204ENST00000455586 PLEKHH1Q9ULM0 1364 aa12.57□□□□□ -0.4
VSIG4-204ENST00000455586 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
VSIG4-204ENST00000455586 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
VSIG4-204ENST00000455586 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
VSIG4-204ENST00000455586 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
VSIG4-204ENST00000455586 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
VSIG4-204ENST00000455586 NEFLP07196 543 aa12.56□□□□□ -0.4
VSIG4-204ENST00000455586 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
VSIG4-204ENST00000455586 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms