RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 RIMS2Q9UQ26 1411 aa20.78■□□□□ 0.92
HMGXB4-204ENST00000455359 SCAF11Q99590 1463 aaKnown RBP20.76■□□□□ 0.91
HMGXB4-204ENST00000455359 LTKP29376 864 aa20.76■□□□□ 0.91
HMGXB4-204ENST00000455359 VGFO15240 615 aaPredicted RBP20.75■□□□□ 0.91
HMGXB4-204ENST00000455359 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
HMGXB4-204ENST00000455359 PPP1R15AO75807 674 aaPredicted RBP20.74■□□□□ 0.91
HMGXB4-204ENST00000455359 RGL3Q3MIN7 710 aa20.74■□□□□ 0.91
HMGXB4-204ENST00000455359 MED14O60244 1454 aa20.74■□□□□ 0.91
HMGXB4-204ENST00000455359 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
HMGXB4-204ENST00000455359 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
HMGXB4-204ENST00000455359 KIF1BO60333 1816 aa20.71■□□□□ 0.91
HMGXB4-204ENST00000455359 PLEKHG1Q9ULL1 1385 aa20.71■□□□□ 0.91
HMGXB4-204ENST00000455359 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
HMGXB4-204ENST00000455359 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
HMGXB4-204ENST00000455359 NEXMIFQ5QGS0 1516 aa20.68■□□□□ 0.9
HMGXB4-204ENST00000455359 TIMELESSQ9UNS1 1208 aa20.68■□□□□ 0.9
HMGXB4-204ENST00000455359 DCAF11Q8TEB1 546 aa20.65■□□□□ 0.9
HMGXB4-204ENST00000455359 MYOM2P54296 1465 aa20.65■□□□□ 0.9
HMGXB4-204ENST00000455359 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.89
HMGXB4-204ENST00000455359 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
HMGXB4-204ENST00000455359 L3MBTL2Q969R5 705 aa20.63■□□□□ 0.89
HMGXB4-204ENST00000455359 BCANQ96GW7 911 aa20.63■□□□□ 0.89
HMGXB4-204ENST00000455359 TONSLQ96HA7 1378 aa20.63■□□□□ 0.89
HMGXB4-204ENST00000455359 STRCQ7RTU9 1775 aa20.62■□□□□ 0.89
HMGXB4-204ENST00000455359 ADGRF5Q8IZF2 1346 aa20.61■□□□□ 0.89
HMGXB4-204ENST00000455359 NRXN1Q9ULB1 1477 aa20.61■□□□□ 0.89
HMGXB4-204ENST00000455359 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
HMGXB4-204ENST00000455359 POLR1AO95602 1720 aaPredicted RBP20.59■□□□□ 0.89
HMGXB4-204ENST00000455359 SETBP1Q9Y6X0 1596 aa20.59■□□□□ 0.89
HMGXB4-204ENST00000455359 ADAMTS13Q76LX8 1427 aa20.59■□□□□ 0.89
HMGXB4-204ENST00000455359 PIK3C2GO75747 1445 aa20.58■□□□□ 0.88
HMGXB4-204ENST00000455359 PIK3R4Q99570 1358 aa20.58■□□□□ 0.88
HMGXB4-204ENST00000455359 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
HMGXB4-204ENST00000455359 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
HMGXB4-204ENST00000455359 C14orf93Q9H972 538 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-204ENST00000455359 PPLO60437 1756 aa20.56■□□□□ 0.88
HMGXB4-204ENST00000455359 IQGAP1P46940 1657 aa20.56■□□□□ 0.88
HMGXB4-204ENST00000455359 DIP2AQ14689 1571 aa20.55■□□□□ 0.88
HMGXB4-204ENST00000455359 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
HMGXB4-204ENST00000455359 PRAG1Q86YV5 1406 aa20.52■□□□□ 0.87
HMGXB4-204ENST00000455359 KCNA6P17658 529 aa20.52■□□□□ 0.87
HMGXB4-204ENST00000455359 ALKQ9UM73 1620 aa20.48■□□□□ 0.87
HMGXB4-204ENST00000455359 NRXN3Q9Y4C0 1643 aa20.48■□□□□ 0.87
HMGXB4-204ENST00000455359 METP08581 1390 aa20.48■□□□□ 0.87
HMGXB4-204ENST00000455359 CFAP70Q5T0N1 1121 aa20.48■□□□□ 0.87
HMGXB4-204ENST00000455359 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
HMGXB4-204ENST00000455359 ZNF335Q9H4Z2 1342 aaPredicted RBP20.46■□□□□ 0.87
HMGXB4-204ENST00000455359 AMOTL2Q9Y2J4 779 aa20.44■□□□□ 0.86
HMGXB4-204ENST00000455359 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
HMGXB4-204ENST00000455359 LAMC1P11047 1609 aa20.43■□□□□ 0.86
HMGXB4-204ENST00000455359 ABCC11Q96J66 1382 aa20.42■□□□□ 0.86
HMGXB4-204ENST00000455359 SIRT1Q96EB6 747 aa20.42■□□□□ 0.86
HMGXB4-204ENST00000455359 CPS1P31327 1500 aa20.42■□□□□ 0.86
HMGXB4-204ENST00000455359 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
HMGXB4-204ENST00000455359 NBPF8Q3BBV2 869 aa20.41■□□□□ 0.86
HMGXB4-204ENST00000455359 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
HMGXB4-204ENST00000455359 NWD1Q149M9 1564 aa20.4■□□□□ 0.86
HMGXB4-204ENST00000455359 TMEM132EQ6IEE7 984 aa20.4■□□□□ 0.86
HMGXB4-204ENST00000455359 TECPR2O15040 1411 aa20.4■□□□□ 0.86
HMGXB4-204ENST00000455359 YTHDC2Q9H6S0 1430 aaKnown RBP20.39■□□□□ 0.85
HMGXB4-204ENST00000455359 ADGRB1O14514 1584 aa20.39■□□□□ 0.85
HMGXB4-204ENST00000455359 GPRASP1Q5JY77 1395 aa20.38■□□□□ 0.85
HMGXB4-204ENST00000455359 PTCH1Q13635 1447 aa20.38■□□□□ 0.85
HMGXB4-204ENST00000455359 NCOA3Q9Y6Q9 1424 aa20.38■□□□□ 0.85
HMGXB4-204ENST00000455359 NBPF1Q3BBV0 1214 aa20.37■□□□□ 0.85
HMGXB4-204ENST00000455359 LTBP4Q8N2S1 1624 aa20.37■□□□□ 0.85
HMGXB4-204ENST00000455359 SETD1AO15047 1707 aaKnown RBP20.37■□□□□ 0.85
HMGXB4-204ENST00000455359 KIAA1210Q9ULL0 1709 aa20.37■□□□□ 0.85
HMGXB4-204ENST00000455359 ASXL1Q8IXJ9 1541 aa20.36■□□□□ 0.85
HMGXB4-204ENST00000455359 ROCK2O75116 1388 aaKnown RBP20.36■□□□□ 0.85
HMGXB4-204ENST00000455359 PROSER2Q86WR7 435 aaPredicted RBP20.36■□□□□ 0.85
HMGXB4-204ENST00000455359 RALGAPBQ86X10 1494 aa20.35■□□□□ 0.85
HMGXB4-204ENST00000455359 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
HMGXB4-204ENST00000455359 STK26Q9P289 416 aa20.34■□□□□ 0.85
HMGXB4-204ENST00000455359 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
HMGXB4-204ENST00000455359 LRRC7Q96NW7 1537 aa20.32■□□□□ 0.84
HMGXB4-204ENST00000455359 DLC1Q96QB1 1528 aa20.32■□□□□ 0.84
HMGXB4-204ENST00000455359 XRN1Q8IZH2 1706 aaKnown RBP20.32■□□□□ 0.84
HMGXB4-204ENST00000455359 TMEM94Q12767 1356 aa20.32■□□□□ 0.84
HMGXB4-204ENST00000455359 ROBO2Q9HCK4 1378 aa20.32■□□□□ 0.84
HMGXB4-204ENST00000455359 IQSEC2Q5JU85 1478 aa20.31■□□□□ 0.84
HMGXB4-204ENST00000455359 CERKQ8TCT0 537 aa20.3■□□□□ 0.84
HMGXB4-204ENST00000455359 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
HMGXB4-204ENST00000455359 TRAK1Q9UPV9 953 aa20.3■□□□□ 0.84
HMGXB4-204ENST00000455359 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
HMGXB4-204ENST00000455359 TRPM1Q7Z4N2 1603 aa20.29■□□□□ 0.84
HMGXB4-204ENST00000455359 POGKQ9P215 609 aa20.27■□□□□ 0.84
HMGXB4-204ENST00000455359 EIF3AQ14152 1382 aaKnown RBP20.27■□□□□ 0.84
HMGXB4-204ENST00000455359 PRAM1Q96QH2 718 aa20.27■□□□□ 0.83
HMGXB4-204ENST00000455359 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.83
HMGXB4-204ENST00000455359 WAPLQ7Z5K2 1190 aa20.25■□□□□ 0.83
HMGXB4-204ENST00000455359 C14orf37Q86TY3 774 aa20.25■□□□□ 0.83
HMGXB4-204ENST00000455359 STRCP1A6NGW2 1772 aa20.25■□□□□ 0.83
HMGXB4-204ENST00000455359 KNDC1Q76NI1 1749 aa20.24■□□□□ 0.83
HMGXB4-204ENST00000455359 MSH6P52701 1360 aa20.24■□□□□ 0.83
HMGXB4-204ENST00000455359 ADGRL3Q9HAR2 1447 aa20.23■□□□□ 0.83
HMGXB4-204ENST00000455359 CENPJQ9HC77 1338 aaPredicted RBP20.22■□□□□ 0.83
HMGXB4-204ENST00000455359 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
HMGXB4-204ENST00000455359 DCCP43146 1447 aa20.22■□□□□ 0.83
HMGXB4-204ENST00000455359 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms