RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 XIRP1Q702N8 1843 aaKnown RBP12.46□□□□□ -0.42
NIF3L1-209ENST00000454952 ADGRL2O95490 1459 aa12.46□□□□□ -0.42
NIF3L1-209ENST00000454952 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.42
NIF3L1-209ENST00000454952 ADGRB3O60242 1522 aa12.45□□□□□ -0.42
NIF3L1-209ENST00000454952 NOS1P29475 1434 aa12.45□□□□□ -0.42
NIF3L1-209ENST00000454952 KCNA6P17658 529 aa12.44□□□□□ -0.42
NIF3L1-209ENST00000454952 HDGFP51858 240 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-209ENST00000454952 IDI1Q13907 227 aa12.44□□□□□ -0.42
NIF3L1-209ENST00000454952 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
NIF3L1-209ENST00000454952 FAM135BQ49AJ0 1406 aa12.43□□□□□ -0.42
NIF3L1-209ENST00000454952 NKTRP30414 1462 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-209ENST00000454952 ANKRD50Q9ULJ7 1429 aa12.42□□□□□ -0.42
NIF3L1-209ENST00000454952 TET3O43151 1660 aa12.42□□□□□ -0.42
NIF3L1-209ENST00000454952 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
NIF3L1-209ENST00000454952 NWD1Q149M9 1564 aa12.4□□□□□ -0.42
NIF3L1-209ENST00000454952 FAM50AQ14320 339 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-209ENST00000454952 PROSER2Q86WR7 435 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-209ENST00000454952 BCANQ96GW7 911 aa12.4□□□□□ -0.42
NIF3L1-209ENST00000454952 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
NIF3L1-209ENST00000454952 GCC2Q8IWJ2 1684 aa12.4□□□□□ -0.42
NIF3L1-209ENST00000454952 SLC26A8Q96RN1 970 aa12.39□□□□□ -0.43
NIF3L1-209ENST00000454952 MSH6P52701 1360 aa12.38□□□□□ -0.43
NIF3L1-209ENST00000454952 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-209ENST00000454952 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
NIF3L1-209ENST00000454952 PLEKHG1Q9ULL1 1385 aa12.37□□□□□ -0.43
NIF3L1-209ENST00000454952 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
NIF3L1-209ENST00000454952 UNC13BO14795 1591 aa12.36□□□□□ -0.43
NIF3L1-209ENST00000454952 CHD2O14647 1828 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-209ENST00000454952 MYO5BQ9ULV0 1848 aa12.36□□□□□ -0.43
NIF3L1-209ENST00000454952 ZFYVE9O95405 1425 aa12.36□□□□□ -0.43
NIF3L1-209ENST00000454952 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
NIF3L1-209ENST00000454952 TMEM131LA2VDJ0 1609 aa12.35□□□□□ -0.43
NIF3L1-209ENST00000454952 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
NIF3L1-209ENST00000454952 NCOA3Q9Y6Q9 1424 aa12.35□□□□□ -0.43
NIF3L1-209ENST00000454952 ROCK1Q13464 1354 aa12.34□□□□□ -0.43
NIF3L1-209ENST00000454952 DIP2AQ14689 1571 aa12.34□□□□□ -0.43
NIF3L1-209ENST00000454952 TBX22Q9Y458 520 aa12.33□□□□□ -0.44
NIF3L1-209ENST00000454952 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
NIF3L1-209ENST00000454952 PHLPP1O60346 1717 aa12.32□□□□□ -0.44
NIF3L1-209ENST00000454952 SLAIN2Q9P270 581 aa12.32□□□□□ -0.44
NIF3L1-209ENST00000454952 IQGAP3Q86VI3 1631 aa12.32□□□□□ -0.44
NIF3L1-209ENST00000454952 E9PCH4 1651 aa12.31□□□□□ -0.44
NIF3L1-209ENST00000454952 JCADQ9P266 1359 aa12.3□□□□□ -0.44
NIF3L1-209ENST00000454952 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
NIF3L1-209ENST00000454952 RGS17Q9UGC6 210 aaPredicted RBP12.3□□□□□ -0.44
NIF3L1-209ENST00000454952 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
NIF3L1-209ENST00000454952 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
NIF3L1-209ENST00000454952 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-209ENST00000454952 TRPM2O94759 1503 aa12.28□□□□□ -0.44
NIF3L1-209ENST00000454952 ATF3P18847 181 aa12.27□□□□□ -0.45
NIF3L1-209ENST00000454952 C19orf44Q9H6X5 657 aa12.27□□□□□ -0.45
NIF3L1-209ENST00000454952 NUP155O75694 1391 aa12.27□□□□□ -0.45
NIF3L1-209ENST00000454952 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
NIF3L1-209ENST00000454952 ADAMTS13Q76LX8 1427 aa12.26□□□□□ -0.45
NIF3L1-209ENST00000454952 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-209ENST00000454952 COL16A1Q07092 1604 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-209ENST00000454952 SPHKAPQ2M3C7 1700 aa12.24□□□□□ -0.45
NIF3L1-209ENST00000454952 AHDC1Q5TGY3 1603 aaPredicted RBP12.24□□□□□ -0.45
NIF3L1-209ENST00000454952 POTEAQ6S8J7 498 aa12.24□□□□□ -0.45
NIF3L1-209ENST00000454952 DCCP43146 1447 aa12.23□□□□□ -0.45
NIF3L1-209ENST00000454952 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
NIF3L1-209ENST00000454952 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
NIF3L1-209ENST00000454952 MEX3CQ5U5Q3 659 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-209ENST00000454952 AMOTL2Q9Y2J4 779 aa12.22□□□□□ -0.45
NIF3L1-209ENST00000454952 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
NIF3L1-209ENST00000454952 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-209ENST00000454952 ZNF772Q68DY9 489 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-209ENST00000454952 ITGAEP38570 1179 aa12.2□□□□□ -0.46
NIF3L1-209ENST00000454952 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-209ENST00000454952 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-209ENST00000454952 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
NIF3L1-209ENST00000454952 NRXN3Q9Y4C0 1643 aa12.18□□□□□ -0.46
NIF3L1-209ENST00000454952 KIF1BO60333 1816 aa12.18□□□□□ -0.46
NIF3L1-209ENST00000454952 BRINP3Q76B58 766 aa12.17□□□□□ -0.46
NIF3L1-209ENST00000454952 PTPRUQ92729 1446 aa12.17□□□□□ -0.46
NIF3L1-209ENST00000454952 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-209ENST00000454952 LRP6O75581 1613 aa12.16□□□□□ -0.46
NIF3L1-209ENST00000454952 ASXL1Q8IXJ9 1541 aa12.16□□□□□ -0.46
NIF3L1-209ENST00000454952 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.47
NIF3L1-209ENST00000454952 MST1RQ04912 1400 aa12.14□□□□□ -0.47
NIF3L1-209ENST00000454952 SETD5Q9C0A6 1442 aa12.14□□□□□ -0.47
NIF3L1-209ENST00000454952 ADGRL3Q9HAR2 1447 aa12.14□□□□□ -0.47
NIF3L1-209ENST00000454952 LRRC59Q96AG4 307 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-209ENST00000454952 NEXMIFQ5QGS0 1516 aa12.14□□□□□ -0.47
NIF3L1-209ENST00000454952 CLTCL1P53675 1640 aa12.14□□□□□ -0.47
NIF3L1-209ENST00000454952 RXRBP28702 533 aa12.13□□□□□ -0.47
NIF3L1-209ENST00000454952 METP08581 1390 aa12.13□□□□□ -0.47
NIF3L1-209ENST00000454952 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-209ENST00000454952 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-209ENST00000454952 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-209ENST00000454952 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-209ENST00000454952 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-209ENST00000454952 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-209ENST00000454952 NALCNQ8IZF0 1738 aa12.11□□□□□ -0.47
NIF3L1-209ENST00000454952 PTCH1Q13635 1447 aa12.11□□□□□ -0.47
NIF3L1-209ENST00000454952 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
NIF3L1-209ENST00000454952 NAIPQ13075 1403 aa12.1□□□□□ -0.47
NIF3L1-209ENST00000454952 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
NIF3L1-209ENST00000454952 PRAG1Q86YV5 1406 aa12.09□□□□□ -0.47
NIF3L1-209ENST00000454952 AFF2P51816 1311 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms