RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
RPE-216ENST00000454822 NOS1P29475 1434 aa12.08□□□□□ -0.48
RPE-216ENST00000454822 PER1O15534 1290 aaPredicted RBP12.08□□□□□ -0.48
RPE-216ENST00000454822 RALBP1Q15311 655 aa12.07□□□□□ -0.48
RPE-216ENST00000454822 IFT172Q9UG01 1749 aa12.07□□□□□ -0.48
RPE-216ENST00000454822 ARHGAP31Q2M1Z3 1444 aa12.07□□□□□ -0.48
RPE-216ENST00000454822 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
RPE-216ENST00000454822 NRXN1Q9ULB1 1477 aa12.06□□□□□ -0.48
RPE-216ENST00000454822 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
RPE-216ENST00000454822 PANK3Q9H999 370 aa12.06□□□□□ -0.48
RPE-216ENST00000454822 RPGRIP1LQ68CZ1 1315 aa12.06□□□□□ -0.48
RPE-216ENST00000454822 SIGLEC1Q9BZZ2 1709 aa12.05□□□□□ -0.48
RPE-216ENST00000454822 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
RPE-216ENST00000454822 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
RPE-216ENST00000454822 MYBBP1AQ9BQG0 1328 aaKnown RBP12.04□□□□□ -0.48
RPE-216ENST00000454822 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
RPE-216ENST00000454822 TMC1Q8TDI8 760 aa12.04□□□□□ -0.48
RPE-216ENST00000454822 SYNMO15061 1565 aa12.03□□□□□ -0.48
RPE-216ENST00000454822 IDI1Q13907 227 aa12.03□□□□□ -0.48
RPE-216ENST00000454822 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
RPE-216ENST00000454822 C14orf93Q9H972 538 aaKnown RBP12.03□□□□□ -0.48
RPE-216ENST00000454822 PPLO60437 1756 aa12.02□□□□□ -0.48
RPE-216ENST00000454822 PIK3C2BO00750 1634 aa12.02□□□□□ -0.48
RPE-216ENST00000454822 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
RPE-216ENST00000454822 PARD3Q8TEW0 1356 aa12.02□□□□□ -0.49
RPE-216ENST00000454822 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
RPE-216ENST00000454822 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
RPE-216ENST00000454822 BRD4O60885 1362 aaPredicted RBP12.01□□□□□ -0.49
RPE-216ENST00000454822 PIK3C2GO75747 1445 aa12.01□□□□□ -0.49
RPE-216ENST00000454822 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
RPE-216ENST00000454822 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
RPE-216ENST00000454822 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
RPE-216ENST00000454822 REREQ9P2R6 1566 aa12□□□□□ -0.49
RPE-216ENST00000454822 AGLP35573 1532 aa11.99□□□□□ -0.49
RPE-216ENST00000454822 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
RPE-216ENST00000454822 FKBP8Q14318 412 aa11.99□□□□□ -0.49
RPE-216ENST00000454822 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
RPE-216ENST00000454822 SETBP1Q9Y6X0 1596 aa11.99□□□□□ -0.49
RPE-216ENST00000454822 NUTM2DQ5VT03 806 aaPredicted RBP11.99□□□□□ -0.49
RPE-216ENST00000454822 FBXO31Q5XUX0 539 aaPredicted RBP11.99□□□□□ -0.49
RPE-216ENST00000454822 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
RPE-216ENST00000454822 TMEM132EQ6IEE7 984 aa11.98□□□□□ -0.49
RPE-216ENST00000454822 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
RPE-216ENST00000454822 PREX1Q8TCU6 1659 aa11.98□□□□□ -0.49
RPE-216ENST00000454822 NEFLP07196 543 aa11.97□□□□□ -0.49
RPE-216ENST00000454822 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
RPE-216ENST00000454822 ERVK-7P63135 1459 aa11.97□□□□□ -0.49
RPE-216ENST00000454822 KNSTRNQ9Y448 316 aa11.96□□□□□ -0.49
RPE-216ENST00000454822 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.49
RPE-216ENST00000454822 LRPPRCP42704 1394 aaKnown RBP11.96□□□□□ -0.49
RPE-216ENST00000454822 ADGRB1O14514 1584 aa11.96□□□□□ -0.5
RPE-216ENST00000454822 MLECQ14165 292 aa11.95□□□□□ -0.5
RPE-216ENST00000454822 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
RPE-216ENST00000454822 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
RPE-216ENST00000454822 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
RPE-216ENST00000454822 ZFYVE9O95405 1425 aa11.94□□□□□ -0.5
RPE-216ENST00000454822 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
RPE-216ENST00000454822 TMEM131LA2VDJ0 1609 aa11.94□□□□□ -0.5
RPE-216ENST00000454822 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
RPE-216ENST00000454822 MYOM1P52179 1685 aa11.92□□□□□ -0.5
RPE-216ENST00000454822 CLTCQ00610 1675 aaKnown RBP11.92□□□□□ -0.5
RPE-216ENST00000454822 ARHGEF40Q8TER5 1519 aa11.92□□□□□ -0.5
RPE-216ENST00000454822 BCANQ96GW7 911 aa11.92□□□□□ -0.5
RPE-216ENST00000454822 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
RPE-216ENST00000454822 ASXL1Q8IXJ9 1541 aa11.9□□□□□ -0.5
RPE-216ENST00000454822 NPC1L1Q9UHC9 1359 aa11.9□□□□□ -0.5
RPE-216ENST00000454822 SENP3-EIF4A1A0A087X0R7 540 aa11.9□□□□□ -0.5
RPE-216ENST00000454822 PPP2R1AP30153 589 aa11.9□□□□□ -0.5
RPE-216ENST00000454822 CARD14Q9BXL6 1004 aa11.9□□□□□ -0.5
RPE-216ENST00000454822 QRICH2Q9H0J4 1663 aa11.89□□□□□ -0.51
RPE-216ENST00000454822 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
RPE-216ENST00000454822 SMG6Q86US8 1419 aaKnown RBP11.89□□□□□ -0.51
RPE-216ENST00000454822 SPATA31D1Q6ZQQ2 1576 aa11.89□□□□□ -0.51
RPE-216ENST00000454822 ESF1Q9H501 851 aaKnown RBP11.88□□□□□ -0.51
RPE-216ENST00000454822 STK26Q9P289 416 aa11.87□□□□□ -0.51
RPE-216ENST00000454822 ZMYM3Q14202 1370 aa11.87□□□□□ -0.51
RPE-216ENST00000454822 PUS7Q96PZ0 661 aaKnown RBP11.87□□□□□ -0.51
RPE-216ENST00000454822 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
RPE-216ENST00000454822 SLC12A5Q9H2X9 1139 aa11.86□□□□□ -0.51
RPE-216ENST00000454822 INSRP06213 1382 aa11.86□□□□□ -0.51
RPE-216ENST00000454822 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
RPE-216ENST00000454822 ARHGEF28Q8N1W1 1705 aaKnown RBP11.86□□□□□ -0.51
RPE-216ENST00000454822 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
RPE-216ENST00000454822 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
RPE-216ENST00000454822 IRX6P78412 446 aaPredicted RBP11.86□□□□□ -0.51
RPE-216ENST00000454822 SAFB2Q14151 953 aaKnown RBP eCLIP11.84□□□□□ -0.51
RPE-216ENST00000454822 ADAMTS8Q9UP79 889 aa11.84□□□□□ -0.51
RPE-216ENST00000454822 ALKQ9UM73 1620 aa11.84□□□□□ -0.51
RPE-216ENST00000454822 YTHDC2Q9H6S0 1430 aaKnown RBP11.83□□□□□ -0.52
RPE-216ENST00000454822 RIMS2Q9UQ26 1411 aa11.83□□□□□ -0.52
RPE-216ENST00000454822 SALL2Q9Y467 1007 aaPredicted RBP11.83□□□□□ -0.52
RPE-216ENST00000454822 BLMP54132 1417 aaPredicted RBP11.83□□□□□ -0.52
RPE-216ENST00000454822 ERICH6BQ5W0A0 696 aa11.83□□□□□ -0.52
RPE-216ENST00000454822 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
RPE-216ENST00000454822 TULP4Q9NRJ4 1543 aa11.82□□□□□ -0.52
RPE-216ENST00000454822 PRAM1Q96QH2 718 aa11.82□□□□□ -0.52
RPE-216ENST00000454822 NSD3Q9BZ95 1437 aa11.82□□□□□ -0.52
RPE-216ENST00000454822 PTPRMP28827 1452 aa11.81□□□□□ -0.52
RPE-216ENST00000454822 POGKQ9P215 609 aa11.81□□□□□ -0.52
RPE-216ENST00000454822 PDE3BQ13370 1112 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms