RNA–Protein interactions for RNA: ENST00000454716.1

RPS3AP53-201, Transcript of ribosomal protein S3a pseudogene 53, humanhuman

BASIC

Gene RPS3AP53, Length 778 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP53-201ENST00000454716 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
RPS3AP53-201ENST00000454716 IL21Q9HBE4 155 aa12.93□□□□□ -0.34
RPS3AP53-201ENST00000454716 GPR37O15354 613 aa12.92□□□□□ -0.34
RPS3AP53-201ENST00000454716 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
RPS3AP53-201ENST00000454716 METTL3Q86U44 580 aaKnown RBP12.91□□□□□ -0.34
RPS3AP53-201ENST00000454716 APLP1P51693 650 aa12.9□□□□□ -0.34
RPS3AP53-201ENST00000454716 KMT5BQ4FZB7 885 aa12.9□□□□□ -0.34
RPS3AP53-201ENST00000454716 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
RPS3AP53-201ENST00000454716 MTRQ99707 1265 aa12.89□□□□□ -0.35
RPS3AP53-201ENST00000454716 FECHP22830 423 aa12.86□□□□□ -0.35
RPS3AP53-201ENST00000454716 PCDHB3Q9Y5E6 796 aa12.84□□□□□ -0.35
RPS3AP53-201ENST00000454716 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
RPS3AP53-201ENST00000454716 DAXXQ9UER7 740 aaPredicted RBP12.82□□□□□ -0.36
RPS3AP53-201ENST00000454716 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
RPS3AP53-201ENST00000454716 CFHP08603 1231 aa12.81□□□□□ -0.36
RPS3AP53-201ENST00000454716 SULF1Q8IWU6 871 aa12.81□□□□□ -0.36
RPS3AP53-201ENST00000454716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.8□□□□□ -0.36
RPS3AP53-201ENST00000454716 GGCXP38435 758 aa12.79□□□□□ -0.36
RPS3AP53-201ENST00000454716 MINK1Q8N4C8 1332 aaPredicted RBP12.79□□□□□ -0.36
RPS3AP53-201ENST00000454716 COPS2P61201 443 aa12.78□□□□□ -0.36
RPS3AP53-201ENST00000454716 ZPR1O75312 459 aa12.76□□□□□ -0.37
RPS3AP53-201ENST00000454716 SLC10A3P09131 477 aa12.76□□□□□ -0.37
RPS3AP53-201ENST00000454716 RDH13Q8NBN7 331 aa12.76□□□□□ -0.37
RPS3AP53-201ENST00000454716 IRF6O14896 467 aa12.75□□□□□ -0.37
RPS3AP53-201ENST00000454716 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
RPS3AP53-201ENST00000454716 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
RPS3AP53-201ENST00000454716 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
RPS3AP53-201ENST00000454716 NR1I2O75469 434 aa12.74□□□□□ -0.37
RPS3AP53-201ENST00000454716 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
RPS3AP53-201ENST00000454716 BLOC1S3Q6QNY0 202 aa12.73□□□□□ -0.37
RPS3AP53-201ENST00000454716 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
RPS3AP53-201ENST00000454716 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.37
RPS3AP53-201ENST00000454716 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
RPS3AP53-201ENST00000454716 KRI1Q8N9T8 703 aaKnown RBP12.68□□□□□ -0.38
RPS3AP53-201ENST00000454716 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
RPS3AP53-201ENST00000454716 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
RPS3AP53-201ENST00000454716 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
RPS3AP53-201ENST00000454716 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
RPS3AP53-201ENST00000454716 GCGRP47871 477 aa12.65□□□□□ -0.38
RPS3AP53-201ENST00000454716 NLRP7Q8WX94 980 aa12.65□□□□□ -0.38
RPS3AP53-201ENST00000454716 IRX2Q9BZI1 471 aaPredicted RBP12.65□□□□□ -0.38
RPS3AP53-201ENST00000454716 CLCN1P35523 988 aa12.64□□□□□ -0.39
RPS3AP53-201ENST00000454716 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
RPS3AP53-201ENST00000454716 V9GY48 417 aaPredicted RBP12.63□□□□□ -0.39
RPS3AP53-201ENST00000454716 ADH1BP00325 375 aa12.62□□□□□ -0.39
RPS3AP53-201ENST00000454716 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
RPS3AP53-201ENST00000454716 MDM2Q00987 491 aaPredicted RBP12.61□□□□□ -0.39
RPS3AP53-201ENST00000454716 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
RPS3AP53-201ENST00000454716 GPCPD1Q9NPB8 672 aa12.6□□□□□ -0.39
RPS3AP53-201ENST00000454716 ZMYND10O75800 440 aa12.59□□□□□ -0.39
RPS3AP53-201ENST00000454716 FUT2Q10981 343 aa12.59□□□□□ -0.39
RPS3AP53-201ENST00000454716 ZC3H15Q8WU90 426 aaKnown RBP12.59□□□□□ -0.39
RPS3AP53-201ENST00000454716 PRKD2Q9BZL6 878 aa12.59□□□□□ -0.39
RPS3AP53-201ENST00000454716 CD46P15529 392 aa12.58□□□□□ -0.4
RPS3AP53-201ENST00000454716 PUS10Q3MIT2 529 aaKnown RBP12.58□□□□□ -0.4
RPS3AP53-201ENST00000454716 MORN1Q5T089 497 aa12.58□□□□□ -0.4
RPS3AP53-201ENST00000454716 TLL1O43897 1013 aa12.57□□□□□ -0.4
RPS3AP53-201ENST00000454716 SPSB2Q99619 263 aa12.57□□□□□ -0.4
RPS3AP53-201ENST00000454716 USP46P62068 366 aa12.56□□□□□ -0.4
RPS3AP53-201ENST00000454716 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
RPS3AP53-201ENST00000454716 ANKLE1Q8NAG6 615 aa12.56□□□□□ -0.4
RPS3AP53-201ENST00000454716 SLC6A16Q9GZN6 736 aa12.56□□□□□ -0.4
RPS3AP53-201ENST00000454716 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
RPS3AP53-201ENST00000454716 FMNL1O95466 1100 aaPredicted RBP12.55□□□□□ -0.4
RPS3AP53-201ENST00000454716 Q3C1V9 767 aa12.54□□□□□ -0.4
RPS3AP53-201ENST00000454716 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
RPS3AP53-201ENST00000454716 KDM4AO75164 1064 aa12.53□□□□□ -0.4
RPS3AP53-201ENST00000454716 S1PR4O95977 384 aa12.53□□□□□ -0.4
RPS3AP53-201ENST00000454716 SLC24A1O60721 1099 aa12.51□□□□□ -0.41
RPS3AP53-201ENST00000454716 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
RPS3AP53-201ENST00000454716 SLC27A5Q9Y2P5 690 aa12.51□□□□□ -0.41
RPS3AP53-201ENST00000454716 TTLL12Q14166 644 aaPredicted RBP12.49□□□□□ -0.41
RPS3AP53-201ENST00000454716 SLC19A1P41440 591 aa12.48□□□□□ -0.41
RPS3AP53-201ENST00000454716 AMHR2Q16671 573 aa12.48□□□□□ -0.41
RPS3AP53-201ENST00000454716 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
RPS3AP53-201ENST00000454716 THAP11Q96EK4 314 aa12.47□□□□□ -0.41
RPS3AP53-201ENST00000454716 BRICD5Q6PL45 260 aa12.46□□□□□ -0.41
RPS3AP53-201ENST00000454716 AK7Q96M32 723 aa12.46□□□□□ -0.41
RPS3AP53-201ENST00000454716 BCANQ96GW7 911 aa12.45□□□□□ -0.42
RPS3AP53-201ENST00000454716 MSS51Q4VC12 460 aa12.44□□□□□ -0.42
RPS3AP53-201ENST00000454716 GFRA3O60609 400 aa12.43□□□□□ -0.42
RPS3AP53-201ENST00000454716 SSTR3P32745 418 aaPredicted RBP12.43□□□□□ -0.42
RPS3AP53-201ENST00000454716 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
RPS3AP53-201ENST00000454716 HOXA2O43364 376 aa12.42□□□□□ -0.42
RPS3AP53-201ENST00000454716 NRG2O14511 850 aaPredicted RBP12.41□□□□□ -0.42
RPS3AP53-201ENST00000454716 Q6ZNB5 142 aa12.4□□□□□ -0.42
RPS3AP53-201ENST00000454716 ZNF598Q86UK7 904 aaKnown RBP12.4□□□□□ -0.42
RPS3AP53-201ENST00000454716 DIXDC1Q155Q3 683 aa12.39□□□□□ -0.43
RPS3AP53-201ENST00000454716 SPRYD7Q5W111 196 aa12.39□□□□□ -0.43
RPS3AP53-201ENST00000454716 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
RPS3AP53-201ENST00000454716 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
RPS3AP53-201ENST00000454716 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
RPS3AP53-201ENST00000454716 TRIM66O15016 1216 aa12.38□□□□□ -0.43
RPS3AP53-201ENST00000454716 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
RPS3AP53-201ENST00000454716 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
RPS3AP53-201ENST00000454716 RPIAP49247 311 aa12.37□□□□□ -0.43
RPS3AP53-201ENST00000454716 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
RPS3AP53-201ENST00000454716 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
RPS3AP53-201ENST00000454716 ZBTB24O43167 697 aaPredicted RBP12.35□□□□□ -0.43
RPS3AP53-201ENST00000454716 CD2BP2O95400 341 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms