RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 MYOM2P54296 1465 aa29.27■■■□□ 2.28
SH3D21-201ENST00000453908 NOS1P29475 1434 aa29.27■■■□□ 2.28
SH3D21-201ENST00000453908 PANK3Q9H999 370 aa29.26■■■□□ 2.27
SH3D21-201ENST00000453908 ADGRB3O60242 1522 aa29.26■■■□□ 2.27
SH3D21-201ENST00000453908 PER1O15534 1290 aaPredicted RBP29.25■■■□□ 2.27
SH3D21-201ENST00000453908 TMC1Q8TDI8 760 aa29.25■■■□□ 2.27
SH3D21-201ENST00000453908 SIGLEC1Q9BZZ2 1709 aa29.24■■■□□ 2.27
SH3D21-201ENST00000453908 IFT172Q9UG01 1749 aa29.24■■■□□ 2.27
SH3D21-201ENST00000453908 BCANQ96GW7 911 aa29.23■■■□□ 2.27
SH3D21-201ENST00000453908 SENP3-EIF4A1A0A087X0R7 540 aa29.22■■■□□ 2.27
SH3D21-201ENST00000453908 RALBP1Q15311 655 aa29.21■■■□□ 2.27
SH3D21-201ENST00000453908 CC2D1BQ5T0F9 858 aaKnown RBP29.21■■■□□ 2.27
SH3D21-201ENST00000453908 MYBBP1AQ9BQG0 1328 aaKnown RBP29.21■■■□□ 2.27
SH3D21-201ENST00000453908 KTN1Q86UP2 1357 aaKnown RBP29.2■■■□□ 2.26
SH3D21-201ENST00000453908 KIAA1210Q9ULL0 1709 aa29.2■■■□□ 2.26
SH3D21-201ENST00000453908 NUTM2DQ5VT03 806 aaPredicted RBP29.2■■■□□ 2.26
SH3D21-201ENST00000453908 EIF3AQ14152 1382 aaKnown RBP29.17■■■□□ 2.26
SH3D21-201ENST00000453908 NEFLP07196 543 aa29.17■■■□□ 2.26
SH3D21-201ENST00000453908 PNISRQ8TF01 805 aaKnown RBP29.17■■■□□ 2.26
SH3D21-201ENST00000453908 SYNMO15061 1565 aa29.16■■■□□ 2.26
SH3D21-201ENST00000453908 ZBED9Q6R2W3 1325 aa29.16■■■□□ 2.26
SH3D21-201ENST00000453908 ZMYM4Q5VZL5 1548 aa29.16■■■□□ 2.26
SH3D21-201ENST00000453908 NRXN1Q9ULB1 1477 aa29.16■■■□□ 2.26
SH3D21-201ENST00000453908 PARD3Q8TEW0 1356 aa29.14■■■□□ 2.26
SH3D21-201ENST00000453908 SENP3Q9H4L4 574 aaPredicted RBP29.12■■■□□ 2.25
SH3D21-201ENST00000453908 PPLO60437 1756 aa29.12■■■□□ 2.25
SH3D21-201ENST00000453908 IDI1Q13907 227 aa29.12■■■□□ 2.25
SH3D21-201ENST00000453908 BRD4O60885 1362 aaPredicted RBP29.12■■■□□ 2.25
SH3D21-201ENST00000453908 ZC3H13Q5T200 1668 aaKnown RBP29.1■■■□□ 2.25
SH3D21-201ENST00000453908 TMEM132EQ6IEE7 984 aa29.1■■■□□ 2.25
SH3D21-201ENST00000453908 PIK3C2GO75747 1445 aa29.1■■■□□ 2.25
SH3D21-201ENST00000453908 ARHGAP31Q2M1Z3 1444 aa29.1■■■□□ 2.25
SH3D21-201ENST00000453908 CDCA8Q53HL2 280 aa29.09■■■□□ 2.25
SH3D21-201ENST00000453908 TRAK1Q9UPV9 953 aa29.09■■■□□ 2.25
SH3D21-201ENST00000453908 NLRP13Q86W25 1043 aa29.08■■■□□ 2.25
SH3D21-201ENST00000453908 PIK3C2BO00750 1634 aa29.08■■■□□ 2.25
SH3D21-201ENST00000453908 FBXO31Q5XUX0 539 aaPredicted RBP29.07■■■□□ 2.24
SH3D21-201ENST00000453908 C14orf93Q9H972 538 aaKnown RBP29.06■■■□□ 2.24
SH3D21-201ENST00000453908 RPGRIP1LQ68CZ1 1315 aa29.06■■■□□ 2.24
SH3D21-201ENST00000453908 IRX6P78412 446 aaPredicted RBP29.04■■■□□ 2.24
SH3D21-201ENST00000453908 MLECQ14165 292 aa29.04■■■□□ 2.24
SH3D21-201ENST00000453908 KNSTRNQ9Y448 316 aa29.03■■■□□ 2.24
SH3D21-201ENST00000453908 KIF13AQ9H1H9 1805 aa29.02■■■□□ 2.24
SH3D21-201ENST00000453908 ERVK-7P63135 1459 aa29.01■■■□□ 2.24
SH3D21-201ENST00000453908 LRPPRCP42704 1394 aaKnown RBP29■■■□□ 2.23
SH3D21-201ENST00000453908 SLC52A1Q9NWF4 448 aa29■■■□□ 2.23
SH3D21-201ENST00000453908 PREX1Q8TCU6 1659 aa29■■■□□ 2.23
SH3D21-201ENST00000453908 NEXMIFQ5QGS0 1516 aa29■■■□□ 2.23
SH3D21-201ENST00000453908 CENPJQ9HC77 1338 aaPredicted RBP29■■■□□ 2.23
SH3D21-201ENST00000453908 VGFO15240 615 aaPredicted RBP28.99■■■□□ 2.23
SH3D21-201ENST00000453908 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
SH3D21-201ENST00000453908 MYOM1P52179 1685 aa28.99■■■□□ 2.23
SH3D21-201ENST00000453908 KDM5AP29375 1690 aaKnown RBP28.98■■■□□ 2.23
SH3D21-201ENST00000453908 ADGRB1O14514 1584 aa28.98■■■□□ 2.23
SH3D21-201ENST00000453908 MYO5BQ9ULV0 1848 aa28.96■■■□□ 2.23
SH3D21-201ENST00000453908 AMER1Q5JTC6 1135 aaPredicted RBP28.95■■■□□ 2.23
SH3D21-201ENST00000453908 MYO3AQ8NEV4 1616 aa28.92■■■□□ 2.22
SH3D21-201ENST00000453908 SALL2Q9Y467 1007 aaPredicted RBP28.91■■■□□ 2.22
SH3D21-201ENST00000453908 REREQ9P2R6 1566 aa28.91■■■□□ 2.22
SH3D21-201ENST00000453908 AGLP35573 1532 aa28.9■■■□□ 2.22
SH3D21-201ENST00000453908 SLC24A1O60721 1099 aa28.9■■■□□ 2.22
SH3D21-201ENST00000453908 CLTCQ00610 1675 aaKnown RBP28.9■■■□□ 2.22
SH3D21-201ENST00000453908 TMEM131LA2VDJ0 1609 aa28.89■■■□□ 2.22
SH3D21-201ENST00000453908 SBNO2Q9Y2G9 1366 aa28.89■■■□□ 2.21
SH3D21-201ENST00000453908 STAG3Q9UJ98 1225 aa28.88■■■□□ 2.21
SH3D21-201ENST00000453908 ASXL1Q8IXJ9 1541 aa28.88■■■□□ 2.21
SH3D21-201ENST00000453908 QRICH2Q9H0J4 1663 aa28.88■■■□□ 2.21
SH3D21-201ENST00000453908 PPP2R1AP30153 589 aa28.86■■■□□ 2.21
SH3D21-201ENST00000453908 SAFB2Q14151 953 aaKnown RBP eCLIP28.86■■■□□ 2.21
SH3D21-201ENST00000453908 CARD14Q9BXL6 1004 aa28.85■■■□□ 2.21
SH3D21-201ENST00000453908 STK26Q9P289 416 aa28.85■■■□□ 2.21
SH3D21-201ENST00000453908 ARHGEF40Q8TER5 1519 aa28.85■■■□□ 2.21
SH3D21-201ENST00000453908 SMG6Q86US8 1419 aaKnown RBP28.84■■■□□ 2.21
SH3D21-201ENST00000453908 NUDCQ9Y266 331 aa28.83■■■□□ 2.21
SH3D21-201ENST00000453908 PPP6R1Q9UPN7 881 aa28.82■■■□□ 2.2
SH3D21-201ENST00000453908 SLC12A5Q9H2X9 1139 aa28.8■■■□□ 2.2
SH3D21-201ENST00000453908 ZFYVE9O95405 1425 aa28.8■■■□□ 2.2
SH3D21-201ENST00000453908 ARHGEF28Q8N1W1 1705 aaKnown RBP28.78■■■□□ 2.2
SH3D21-201ENST00000453908 ESF1Q9H501 851 aaKnown RBP28.76■■■□□ 2.19
SH3D21-201ENST00000453908 ADAMTS8Q9UP79 889 aa28.74■■■□□ 2.19
SH3D21-201ENST00000453908 NPC1L1Q9UHC9 1359 aa28.74■■■□□ 2.19
SH3D21-201ENST00000453908 SPATA31D1Q6ZQQ2 1576 aa28.72■■■□□ 2.19
SH3D21-201ENST00000453908 CABP2Q9NPB3 220 aa28.71■■■□□ 2.19
SH3D21-201ENST00000453908 EVC2Q86UK5 1308 aa28.71■■■□□ 2.19
SH3D21-201ENST00000453908 NSD3Q9BZ95 1437 aa28.71■■■□□ 2.19
SH3D21-201ENST00000453908 TULP4Q9NRJ4 1543 aa28.7■■■□□ 2.19
SH3D21-201ENST00000453908 ZMYM3Q14202 1370 aa28.7■■■□□ 2.18
SH3D21-201ENST00000453908 BLMP54132 1417 aaPredicted RBP28.7■■■□□ 2.18
SH3D21-201ENST00000453908 A2ML1A8K2U0 1454 aa28.69■■■□□ 2.18
SH3D21-201ENST00000453908 WDR43Q15061 677 aaKnown RBP eCLIP28.69■■■□□ 2.18
SH3D21-201ENST00000453908 PRAM1Q96QH2 718 aa28.68■■■□□ 2.18
SH3D21-201ENST00000453908 MINK1Q8N4C8 1332 aaPredicted RBP28.66■■■□□ 2.18
SH3D21-201ENST00000453908 YTHDC2Q9H6S0 1430 aaKnown RBP28.66■■■□□ 2.18
SH3D21-201ENST00000453908 CDCA7LQ96GN5 454 aa28.65■■■□□ 2.18
SH3D21-201ENST00000453908 ALKQ9UM73 1620 aa28.65■■■□□ 2.18
SH3D21-201ENST00000453908 TNNT2P45379 298 aaPredicted RBP28.65■■■□□ 2.18
SH3D21-201ENST00000453908 POGKQ9P215 609 aa28.64■■■□□ 2.18
SH3D21-201ENST00000453908 RIMS2Q9UQ26 1411 aa28.64■■■□□ 2.17
SH3D21-201ENST00000453908 PTPRMP28827 1452 aa28.63■■■□□ 2.17
SH3D21-201ENST00000453908 SRPK2P78362 688 aaKnown RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms