RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 DIXDC1Q155Q3 683 aa7.51□□□□□ -1.21
HMGN3P1-201ENST00000453847 RTL5Q5HYW3 569 aaPredicted RBP7.51□□□□□ -1.21
HMGN3P1-201ENST00000453847 RSBN1LQ6PCB5 846 aaPredicted RBP7.51□□□□□ -1.21
HMGN3P1-201ENST00000453847 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 LILRB3O75022 631 aa7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 HOXB3P14651 431 aaPredicted RBP7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 NDUFV2P19404 249 aa7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 RANGAP1P46060 587 aaPredicted RBP7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 IRF5Q13568 498 aa7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 ARSIQ5FYB1 569 aa7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 RETREG2Q8NC44 543 aa7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 TSKSQ9UJT2 592 aa7.5□□□□□ -1.21
HMGN3P1-201ENST00000453847 GPR153Q6NV75 609 aa7.48□□□□□ -1.21
HMGN3P1-201ENST00000453847 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
HMGN3P1-201ENST00000453847 CCDC9Q9Y3X0 531 aaKnown RBP7.48□□□□□ -1.21
HMGN3P1-201ENST00000453847 SOCS7O14512 581 aa7.47□□□□□ -1.21
HMGN3P1-201ENST00000453847 CSPP1Q1MSJ5 1256 aa7.47□□□□□ -1.21
HMGN3P1-201ENST00000453847 POTEJP0CG39 1038 aa7.46□□□□□ -1.22
HMGN3P1-201ENST00000453847 GJA5P36382 358 aa7.46□□□□□ -1.22
HMGN3P1-201ENST00000453847 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
HMGN3P1-201ENST00000453847 GJD4Q96KN9 370 aaPredicted RBP7.46□□□□□ -1.22
HMGN3P1-201ENST00000453847 DDX11L8A8MPP1 907 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 GPR37L1O60883 481 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 ABL2P42684 1182 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 ZNF710Q8N1W2 664 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 CABLES1Q8TDN4 633 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 ADAMTS19Q8TE59 1207 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
HMGN3P1-201ENST00000453847 AP1G2O75843 785 aa7.44□□□□□ -1.22
HMGN3P1-201ENST00000453847 NUTM1Q86Y26 1132 aa7.44□□□□□ -1.22
HMGN3P1-201ENST00000453847 AEBP1Q8IUX7 1158 aa7.44□□□□□ -1.22
HMGN3P1-201ENST00000453847 GLMNQ92990 594 aa7.44□□□□□ -1.22
HMGN3P1-201ENST00000453847 TMEM134Q9H6X4 195 aa7.44□□□□□ -1.22
HMGN3P1-201ENST00000453847 SRPK2P78362 688 aaKnown RBP7.43□□□□□ -1.22
HMGN3P1-201ENST00000453847 TATDN2Q93075 761 aa7.43□□□□□ -1.22
HMGN3P1-201ENST00000453847 CALR3Q96L12 384 aaKnown RBP7.43□□□□□ -1.22
HMGN3P1-201ENST00000453847 USP17L8P0C7I0 530 aa7.42□□□□□ -1.22
HMGN3P1-201ENST00000453847 DNAJB2P25686 324 aa7.42□□□□□ -1.22
HMGN3P1-201ENST00000453847 SULF1Q8IWU6 871 aa7.42□□□□□ -1.22
HMGN3P1-201ENST00000453847 BCL2L12Q9HB09 334 aa7.42□□□□□ -1.22
HMGN3P1-201ENST00000453847 PCDHGC3Q9UN70 934 aa7.42□□□□□ -1.22
HMGN3P1-201ENST00000453847 PPP1R15AO75807 674 aaPredicted RBP7.41□□□□□ -1.22
HMGN3P1-201ENST00000453847 TRIM34Q9BYJ4 488 aa7.41□□□□□ -1.22
HMGN3P1-201ENST00000453847 PPP1R3GB7ZBB8 358 aa7.4□□□□□ -1.22
HMGN3P1-201ENST00000453847 SMAPO00193 183 aa7.4□□□□□ -1.22
HMGN3P1-201ENST00000453847 PRPF38BQ5VTL8 546 aaKnown RBP7.4□□□□□ -1.22
HMGN3P1-201ENST00000453847 RGS22Q8NE09 1264 aa7.4□□□□□ -1.22
HMGN3P1-201ENST00000453847 HMX1Q9NP08 348 aaPredicted RBP7.4□□□□□ -1.22
HMGN3P1-201ENST00000453847 PNMA3Q9UL41 463 aa7.4□□□□□ -1.22
HMGN3P1-201ENST00000453847 TRIM6-TRIM34B2RNG4 842 aa7.39□□□□□ -1.23
HMGN3P1-201ENST00000453847 KDM4AO75164 1064 aa7.39□□□□□ -1.23
HMGN3P1-201ENST00000453847 CTDSPL2Q05D32 466 aa7.39□□□□□ -1.23
HMGN3P1-201ENST00000453847 CFAP70Q5T0N1 1121 aa7.39□□□□□ -1.23
HMGN3P1-201ENST00000453847 HDGFL1Q5TGJ6 251 aa7.39□□□□□ -1.23
HMGN3P1-201ENST00000453847 HLA-CQ95604 372 aa7.39□□□□□ -1.23
HMGN3P1-201ENST00000453847 ZSWIM6Q9HCJ5 1215 aa7.39□□□□□ -1.23
HMGN3P1-201ENST00000453847 GCGRP47871 477 aa7.38□□□□□ -1.23
HMGN3P1-201ENST00000453847 GUCA2AQ02747 115 aa7.38□□□□□ -1.23
HMGN3P1-201ENST00000453847 DOK7Q18PE1 504 aa7.38□□□□□ -1.23
HMGN3P1-201ENST00000453847 GZF1Q9H116 711 aaPredicted RBP7.38□□□□□ -1.23
HMGN3P1-201ENST00000453847 NUTM2BA6NNL0 878 aaPredicted RBP7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 NUTM2EB1AL46 878 aaPredicted RBP7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 POTEB2H3BUK9 544 aa7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 HOXA2O43364 376 aa7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 SLC10A3P09131 477 aa7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 PROX2Q3B8N5 592 aa7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 NUTM2DQ5VT03 806 aaPredicted RBP7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 NUTM2AQ8IVF1 878 aaPredicted RBP7.37□□□□□ -1.23
HMGN3P1-201ENST00000453847 NBPF26B4DH59 902 aa7.36□□□□□ -1.23
HMGN3P1-201ENST00000453847 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
HMGN3P1-201ENST00000453847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 CARNS1A5YM72 827 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 FDX1P10109 184 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 PTPREP23469 700 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 PACS2Q86VP3 889 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 WWC1Q8IX03 1113 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 RDH13Q8NBN7 331 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 EPS8L1Q8TE68 723 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 LRRN4Q8WUT4 740 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 ZBTB3Q9H5J0 574 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 NDUFB9Q9Y6M9 179 aa7.35□□□□□ -1.23
HMGN3P1-201ENST00000453847 ACIN1Q9UKV3 1341 aaKnown RBP7.34□□□□□ -1.23
HMGN3P1-201ENST00000453847 RFX1P22670 979 aa7.34□□□□□ -1.23
HMGN3P1-201ENST00000453847 PBXIP1Q96AQ6 731 aa7.34□□□□□ -1.23
HMGN3P1-201ENST00000453847 ALG2Q9H553 416 aa7.34□□□□□ -1.23
HMGN3P1-201ENST00000453847 PRM3Q9NNZ6 103 aa7.34□□□□□ -1.23
HMGN3P1-201ENST00000453847 MTMR7Q9Y216 660 aa7.34□□□□□ -1.23
HMGN3P1-201ENST00000453847 CFAP99D6REC4 459 aa7.33□□□□□ -1.24
HMGN3P1-201ENST00000453847 USP46P62068 366 aa7.33□□□□□ -1.24
HMGN3P1-201ENST00000453847 VAC14Q08AM6 782 aa7.33□□□□□ -1.24
HMGN3P1-201ENST00000453847 PPP1R12CQ9BZL4 782 aa7.33□□□□□ -1.24
HMGN3P1-201ENST00000453847 UCN2Q96RP3 112 aa7.32□□□□□ -1.24
HMGN3P1-201ENST00000453847 KIAA1468Q9P260 1216 aa7.32□□□□□ -1.24
HMGN3P1-201ENST00000453847 PSDA5PKW4 1024 aaPredicted RBP7.31□□□□□ -1.24
HMGN3P1-201ENST00000453847 RIMBP2O15034 1052 aa7.31□□□□□ -1.24
HMGN3P1-201ENST00000453847 MFAP1P55081 439 aaKnown RBP7.31□□□□□ -1.24
HMGN3P1-201ENST00000453847 SWT1Q5T5J6 900 aaKnown RBP7.31□□□□□ -1.24
HMGN3P1-201ENST00000453847 WASHC4Q2M389 1173 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms