RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 SPATA31D1Q6ZQQ2 1576 aa11.81□□□□□ -0.52
LMO3-210ENST00000453727 MADDQ8WXG6 1647 aa11.81□□□□□ -0.52
LMO3-210ENST00000453727 IFT172Q9UG01 1749 aa11.81□□□□□ -0.52
LMO3-210ENST00000453727 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
LMO3-210ENST00000453727 USP47Q96K76 1375 aa11.8□□□□□ -0.52
LMO3-210ENST00000453727 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
LMO3-210ENST00000453727 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
LMO3-210ENST00000453727 NBPF1Q3BBV0 1214 aa11.79□□□□□ -0.52
LMO3-210ENST00000453727 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
LMO3-210ENST00000453727 DDX10Q13206 875 aaKnown RBP11.78□□□□□ -0.52
LMO3-210ENST00000453727 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
LMO3-210ENST00000453727 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.52
LMO3-210ENST00000453727 MYOM2P54296 1465 aa11.77□□□□□ -0.53
LMO3-210ENST00000453727 C3P01024 1663 aa11.77□□□□□ -0.53
LMO3-210ENST00000453727 GPRASP1Q5JY77 1395 aa11.77□□□□□ -0.53
LMO3-210ENST00000453727 PPLO60437 1756 aa11.77□□□□□ -0.53
LMO3-210ENST00000453727 TNRQ92752 1358 aa11.76□□□□□ -0.53
LMO3-210ENST00000453727 C11orf95C9JLR9 678 aaPredicted RBP11.76□□□□□ -0.53
LMO3-210ENST00000453727 LAMC1P11047 1609 aa11.76□□□□□ -0.53
LMO3-210ENST00000453727 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
LMO3-210ENST00000453727 WASHC2AQ641Q2 1341 aa11.76□□□□□ -0.53
LMO3-210ENST00000453727 TMEM131LA2VDJ0 1609 aa11.76□□□□□ -0.53
LMO3-210ENST00000453727 RPGRIP1LQ68CZ1 1315 aa11.75□□□□□ -0.53
LMO3-210ENST00000453727 POLR1AO95602 1720 aaPredicted RBP11.75□□□□□ -0.53
LMO3-210ENST00000453727 BCANQ96GW7 911 aa11.75□□□□□ -0.53
LMO3-210ENST00000453727 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
LMO3-210ENST00000453727 ADGRF5Q8IZF2 1346 aa11.75□□□□□ -0.53
LMO3-210ENST00000453727 RIMS1Q86UR5 1692 aaKnown RBP11.75□□□□□ -0.53
LMO3-210ENST00000453727 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
LMO3-210ENST00000453727 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
LMO3-210ENST00000453727 NUTM2DQ5VT03 806 aaPredicted RBP11.74□□□□□ -0.53
LMO3-210ENST00000453727 UBE2Q2Q8WVN8 375 aa11.74□□□□□ -0.53
LMO3-210ENST00000453727 NRXN1Q9ULB1 1477 aa11.73□□□□□ -0.53
LMO3-210ENST00000453727 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
LMO3-210ENST00000453727 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
LMO3-210ENST00000453727 NEXMIFQ5QGS0 1516 aa11.73□□□□□ -0.53
LMO3-210ENST00000453727 CCDC7Q96M83 1385 aa11.73□□□□□ -0.53
LMO3-210ENST00000453727 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
LMO3-210ENST00000453727 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
LMO3-210ENST00000453727 MSH5O43196 834 aa11.72□□□□□ -0.53
LMO3-210ENST00000453727 KIF7Q2M1P5 1343 aa11.71□□□□□ -0.53
LMO3-210ENST00000453727 NLRP1Q9C000 1473 aa11.71□□□□□ -0.54
LMO3-210ENST00000453727 IQGAP1P46940 1657 aa11.71□□□□□ -0.54
LMO3-210ENST00000453727 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
LMO3-210ENST00000453727 PIK3C2GO75747 1445 aa11.7□□□□□ -0.54
LMO3-210ENST00000453727 SALL2Q9Y467 1007 aaPredicted RBP11.69□□□□□ -0.54
LMO3-210ENST00000453727 FKBP8Q14318 412 aa11.68□□□□□ -0.54
LMO3-210ENST00000453727 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
LMO3-210ENST00000453727 ZFYVE9O95405 1425 aa11.68□□□□□ -0.54
LMO3-210ENST00000453727 SENP3Q9H4L4 574 aaPredicted RBP11.68□□□□□ -0.54
LMO3-210ENST00000453727 KDM5AP29375 1690 aaKnown RBP11.67□□□□□ -0.54
LMO3-210ENST00000453727 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
LMO3-210ENST00000453727 SCAF11Q99590 1463 aaKnown RBP11.67□□□□□ -0.54
LMO3-210ENST00000453727 PTPRMP28827 1452 aa11.67□□□□□ -0.54
LMO3-210ENST00000453727 MYO3AQ8NEV4 1616 aa11.66□□□□□ -0.54
LMO3-210ENST00000453727 C14orf93Q9H972 538 aaKnown RBP11.66□□□□□ -0.54
LMO3-210ENST00000453727 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
LMO3-210ENST00000453727 TMEM2Q9UHN6 1383 aa11.66□□□□□ -0.54
LMO3-210ENST00000453727 FANCIQ9NVI1 1328 aa11.66□□□□□ -0.54
LMO3-210ENST00000453727 TESK2Q96S53 571 aa11.66□□□□□ -0.54
LMO3-210ENST00000453727 NEFLP07196 543 aa11.65□□□□□ -0.54
LMO3-210ENST00000453727 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
LMO3-210ENST00000453727 POLR3GLQ9BT43 218 aa11.65□□□□□ -0.54
LMO3-210ENST00000453727 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.65□□□□□ -0.55
LMO3-210ENST00000453727 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.55
LMO3-210ENST00000453727 ADGRB1O14514 1584 aa11.65□□□□□ -0.55
LMO3-210ENST00000453727 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
LMO3-210ENST00000453727 TMEM132EQ6IEE7 984 aa11.64□□□□□ -0.55
LMO3-210ENST00000453727 CEP170BQ9Y4F5 1589 aaPredicted RBP11.63□□□□□ -0.55
LMO3-210ENST00000453727 CCDC136Q96JN2 1154 aa11.63□□□□□ -0.55
LMO3-210ENST00000453727 DISP3Q9P2K9 1392 aa11.63□□□□□ -0.55
LMO3-210ENST00000453727 EIF3AQ14152 1382 aaKnown RBP11.62□□□□□ -0.55
LMO3-210ENST00000453727 ANP32CO43423 234 aa11.61□□□□□ -0.55
LMO3-210ENST00000453727 LTKP29376 864 aa11.61□□□□□ -0.55
LMO3-210ENST00000453727 TXNDC2Q86VQ3 553 aa11.61□□□□□ -0.55
LMO3-210ENST00000453727 EID1Q9Y6B2 187 aa11.61□□□□□ -0.55
LMO3-210ENST00000453727 SLIT1O75093 1534 aa11.6□□□□□ -0.55
LMO3-210ENST00000453727 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
LMO3-210ENST00000453727 KDM4FA0A1W2PPD8 638 aa11.6□□□□□ -0.55
LMO3-210ENST00000453727 TMF1P82094 1093 aa11.6□□□□□ -0.55
LMO3-210ENST00000453727 TRAK1Q9UPV9 953 aa11.6□□□□□ -0.55
LMO3-210ENST00000453727 ARHGAP23Q9P227 1491 aa11.6□□□□□ -0.55
LMO3-210ENST00000453727 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
LMO3-210ENST00000453727 ZNF142P52746 1687 aaPredicted RBP11.59□□□□□ -0.55
LMO3-210ENST00000453727 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
LMO3-210ENST00000453727 ARHGEF28Q8N1W1 1705 aaKnown RBP11.58□□□□□ -0.56
LMO3-210ENST00000453727 NRXN3Q9Y4C0 1643 aa11.58□□□□□ -0.56
LMO3-210ENST00000453727 STK26Q9P289 416 aa11.57□□□□□ -0.56
LMO3-210ENST00000453727 PLEKHG1Q9ULL1 1385 aa11.57□□□□□ -0.56
LMO3-210ENST00000453727 SETD1AO15047 1707 aaKnown RBP11.57□□□□□ -0.56
LMO3-210ENST00000453727 QRICH2Q9H0J4 1663 aa11.57□□□□□ -0.56
LMO3-210ENST00000453727 CENPJQ9HC77 1338 aaPredicted RBP11.57□□□□□ -0.56
LMO3-210ENST00000453727 YTHDC2Q9H6S0 1430 aaKnown RBP11.55□□□□□ -0.56
LMO3-210ENST00000453727 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
LMO3-210ENST00000453727 SLC26A8Q96RN1 970 aa11.55□□□□□ -0.56
LMO3-210ENST00000453727 METP08581 1390 aa11.54□□□□□ -0.56
LMO3-210ENST00000453727 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
LMO3-210ENST00000453727 ADAMTS13Q76LX8 1427 aa11.54□□□□□ -0.56
LMO3-210ENST00000453727 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
LMO3-210ENST00000453727 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms