RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 ADGRF5Q8IZF2 1346 aa24.4■■□□□ 1.5
CTSB-204ENST00000453527 DISP3Q9P2K9 1392 aa24.39■■□□□ 1.5
CTSB-204ENST00000453527 PPLO60437 1756 aa24.39■■□□□ 1.5
CTSB-204ENST00000453527 SYNMO15061 1565 aa24.39■■□□□ 1.49
CTSB-204ENST00000453527 TMF1P82094 1093 aa24.39■■□□□ 1.49
CTSB-204ENST00000453527 CHGAP10645 457 aaKnown RBP24.37■■□□□ 1.49
CTSB-204ENST00000453527 AGLP35573 1532 aa24.37■■□□□ 1.49
CTSB-204ENST00000453527 MRS2Q9HD23 443 aa24.36■■□□□ 1.49
CTSB-204ENST00000453527 RPGRIP1LQ68CZ1 1315 aa24.36■■□□□ 1.49
CTSB-204ENST00000453527 CFAP70Q5T0N1 1121 aa24.35■■□□□ 1.49
CTSB-204ENST00000453527 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
CTSB-204ENST00000453527 PREX1Q8TCU6 1659 aa24.32■■□□□ 1.48
CTSB-204ENST00000453527 KTN1Q86UP2 1357 aaKnown RBP24.31■■□□□ 1.48
CTSB-204ENST00000453527 PPP6R1Q9UPN7 881 aa24.31■■□□□ 1.48
CTSB-204ENST00000453527 PIK3C2GO75747 1445 aa24.3■■□□□ 1.48
CTSB-204ENST00000453527 SLC52A1Q9NWF4 448 aa24.3■■□□□ 1.48
CTSB-204ENST00000453527 SETBP1Q9Y6X0 1596 aa24.3■■□□□ 1.48
CTSB-204ENST00000453527 PER1O15534 1290 aaPredicted RBP24.28■■□□□ 1.48
CTSB-204ENST00000453527 HNRNPUQ00839 825 aaKnown RBP eCLIP24.28■■□□□ 1.48
CTSB-204ENST00000453527 IDI1Q13907 227 aa24.28■■□□□ 1.48
CTSB-204ENST00000453527 CNGB1Q14028 1251 aaPredicted RBP24.27■■□□□ 1.48
CTSB-204ENST00000453527 ARHGEF40Q8TER5 1519 aa24.27■■□□□ 1.48
CTSB-204ENST00000453527 RALBP1Q15311 655 aa24.26■■□□□ 1.47
CTSB-204ENST00000453527 CDCA8Q53HL2 280 aa24.26■■□□□ 1.47
CTSB-204ENST00000453527 FAM9BQ8IZU0 186 aa24.25■■□□□ 1.47
CTSB-204ENST00000453527 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
CTSB-204ENST00000453527 SLC24A1O60721 1099 aa24.25■■□□□ 1.47
CTSB-204ENST00000453527 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
CTSB-204ENST00000453527 PANK3Q9H999 370 aa24.23■■□□□ 1.47
CTSB-204ENST00000453527 CLTCQ00610 1675 aaKnown RBP24.22■■□□□ 1.47
CTSB-204ENST00000453527 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
CTSB-204ENST00000453527 MYO3AQ8NEV4 1616 aa24.22■■□□□ 1.47
CTSB-204ENST00000453527 TMEM131LA2VDJ0 1609 aa24.21■■□□□ 1.47
CTSB-204ENST00000453527 MYO5BQ9ULV0 1848 aa24.21■■□□□ 1.47
CTSB-204ENST00000453527 ERVK-7P63135 1459 aa24.2■■□□□ 1.47
CTSB-204ENST00000453527 ADGRB1O14514 1584 aa24.2■■□□□ 1.46
CTSB-204ENST00000453527 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
CTSB-204ENST00000453527 FBXO31Q5XUX0 539 aaPredicted RBP24.2■■□□□ 1.46
CTSB-204ENST00000453527 PARD3Q8TEW0 1356 aa24.19■■□□□ 1.46
CTSB-204ENST00000453527 ZFYVE9O95405 1425 aa24.18■■□□□ 1.46
CTSB-204ENST00000453527 KDM5AP29375 1690 aaKnown RBP24.18■■□□□ 1.46
CTSB-204ENST00000453527 SBNO2Q9Y2G9 1366 aa24.17■■□□□ 1.46
CTSB-204ENST00000453527 BRD4O60885 1362 aaPredicted RBP24.16■■□□□ 1.46
CTSB-204ENST00000453527 TMC1Q8TDI8 760 aa24.16■■□□□ 1.46
CTSB-204ENST00000453527 MYOM1P52179 1685 aa24.15■■□□□ 1.46
CTSB-204ENST00000453527 NUTM2DQ5VT03 806 aaPredicted RBP24.13■■□□□ 1.45
CTSB-204ENST00000453527 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
CTSB-204ENST00000453527 MLECQ14165 292 aa24.13■■□□□ 1.45
CTSB-204ENST00000453527 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
CTSB-204ENST00000453527 CENPJQ9HC77 1338 aaPredicted RBP24.12■■□□□ 1.45
CTSB-204ENST00000453527 TMEM132EQ6IEE7 984 aa24.11■■□□□ 1.45
CTSB-204ENST00000453527 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
CTSB-204ENST00000453527 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
CTSB-204ENST00000453527 ZBED9Q6R2W3 1325 aa24.1■■□□□ 1.45
CTSB-204ENST00000453527 QRICH2Q9H0J4 1663 aa24.09■■□□□ 1.45
CTSB-204ENST00000453527 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.45
CTSB-204ENST00000453527 SUPT16HQ9Y5B9 1047 aaKnown RBP24.08■■□□□ 1.45
CTSB-204ENST00000453527 KNSTRNQ9Y448 316 aa24.06■■□□□ 1.44
CTSB-204ENST00000453527 LRPPRCP42704 1394 aaKnown RBP24.05■■□□□ 1.44
CTSB-204ENST00000453527 ARHGEF28Q8N1W1 1705 aaKnown RBP24.05■■□□□ 1.44
CTSB-204ENST00000453527 ESF1Q9H501 851 aaKnown RBP24.04■■□□□ 1.44
CTSB-204ENST00000453527 STAG3Q9UJ98 1225 aa24.04■■□□□ 1.44
CTSB-204ENST00000453527 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
CTSB-204ENST00000453527 AMER1Q5JTC6 1135 aaPredicted RBP24.02■■□□□ 1.44
CTSB-204ENST00000453527 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
CTSB-204ENST00000453527 A2ML1A8K2U0 1454 aa24.01■■□□□ 1.43
CTSB-204ENST00000453527 NPC1L1Q9UHC9 1359 aa24■■□□□ 1.43
CTSB-204ENST00000453527 ALKQ9UM73 1620 aa23.95■■□□□ 1.43
CTSB-204ENST00000453527 FKBP8Q14318 412 aa23.94■■□□□ 1.42
CTSB-204ENST00000453527 PUS7Q96PZ0 661 aaKnown RBP23.94■■□□□ 1.42
CTSB-204ENST00000453527 NEFLP07196 543 aa23.94■■□□□ 1.42
CTSB-204ENST00000453527 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
CTSB-204ENST00000453527 EVC2Q86UK5 1308 aa23.92■■□□□ 1.42
CTSB-204ENST00000453527 CARD14Q9BXL6 1004 aa23.92■■□□□ 1.42
CTSB-204ENST00000453527 YTHDC2Q9H6S0 1430 aaKnown RBP23.91■■□□□ 1.42
CTSB-204ENST00000453527 PPP2R1AP30153 589 aa23.91■■□□□ 1.42
CTSB-204ENST00000453527 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
CTSB-204ENST00000453527 STK26Q9P289 416 aa23.91■■□□□ 1.42
CTSB-204ENST00000453527 TULP4Q9NRJ4 1543 aa23.9■■□□□ 1.42
CTSB-204ENST00000453527 PTPRMP28827 1452 aa23.9■■□□□ 1.42
CTSB-204ENST00000453527 INSRP06213 1382 aa23.88■■□□□ 1.41
CTSB-204ENST00000453527 TNRQ92752 1358 aa23.88■■□□□ 1.41
CTSB-204ENST00000453527 TRHP20396 242 aaPredicted RBP23.87■■□□□ 1.41
CTSB-204ENST00000453527 SLC12A5Q9H2X9 1139 aa23.87■■□□□ 1.41
CTSB-204ENST00000453527 SETD1AO15047 1707 aaKnown RBP23.86■■□□□ 1.41
CTSB-204ENST00000453527 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.86■■□□□ 1.41
CTSB-204ENST00000453527 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
CTSB-204ENST00000453527 SAFB2Q14151 953 aaKnown RBP eCLIP23.83■■□□□ 1.41
CTSB-204ENST00000453527 PRAM1Q96QH2 718 aa23.83■■□□□ 1.41
CTSB-204ENST00000453527 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.4
CTSB-204ENST00000453527 NRXN3Q9Y4C0 1643 aa23.82■■□□□ 1.4
CTSB-204ENST00000453527 NSD3Q9BZ95 1437 aa23.81■■□□□ 1.4
CTSB-204ENST00000453527 HDGFP51858 240 aaKnown RBP23.81■■□□□ 1.4
CTSB-204ENST00000453527 POGKQ9P215 609 aa23.81■■□□□ 1.4
CTSB-204ENST00000453527 BLMP54132 1417 aaPredicted RBP23.81■■□□□ 1.4
CTSB-204ENST00000453527 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
CTSB-204ENST00000453527 DLC1Q96QB1 1528 aa23.8■■□□□ 1.4
CTSB-204ENST00000453527 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
CTSB-204ENST00000453527 NUDCQ9Y266 331 aa23.79■■□□□ 1.4
CTSB-204ENST00000453527 SENP3-EIF4A1A0A087X0R7 540 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms