RNA–Protein interactions for RNA: ENST00000452172.1

XPC-203, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-203ENST00000452172 ZMYND15Q9H091 742 aa6.3□□□□□ -1.4
XPC-203ENST00000452172 RSF1Q96T23 1441 aaPredicted RBP6.3□□□□□ -1.4
XPC-203ENST00000452172 BHMG1C9JSJ3 638 aaPredicted RBP6.29□□□□□ -1.4
XPC-203ENST00000452172 MS4A1P11836 297 aa6.29□□□□□ -1.4
XPC-203ENST00000452172 FOSBP53539 338 aa6.29□□□□□ -1.4
XPC-203ENST00000452172 TSR1Q2NL82 804 aaKnown RBP6.29□□□□□ -1.4
XPC-203ENST00000452172 ZNF454Q8N9F8 522 aa6.29□□□□□ -1.4
XPC-203ENST00000452172 BAZ1BQ9UIG0 1483 aaKnown RBP6.28□□□□□ -1.4
XPC-203ENST00000452172 TYW1BQ6NUM6 668 aa6.28□□□□□ -1.4
XPC-203ENST00000452172 BCL2L12Q9HB09 334 aa6.28□□□□□ -1.4
XPC-203ENST00000452172 JPH4Q96JJ6 628 aa6.27□□□□□ -1.41
XPC-203ENST00000452172 TMUB1Q9BVT8 246 aa6.27□□□□□ -1.41
XPC-203ENST00000452172 GOPCQ9HD26 462 aa6.27□□□□□ -1.41
XPC-203ENST00000452172 CLCN1P35523 988 aa6.26□□□□□ -1.41
XPC-203ENST00000452172 PTPN5P54829 565 aa6.26□□□□□ -1.41
XPC-203ENST00000452172 MDM2Q00987 491 aaPredicted RBP6.26□□□□□ -1.41
XPC-203ENST00000452172 FBXW7Q969H0 707 aa6.26□□□□□ -1.41
XPC-203ENST00000452172 PHOX2BQ99453 314 aa6.26□□□□□ -1.41
XPC-203ENST00000452172 ZBED2Q9BTP6 218 aa6.26□□□□□ -1.41
XPC-203ENST00000452172 SLC4A5Q9BY07 1137 aa6.26□□□□□ -1.41
XPC-203ENST00000452172 ADAM33Q9BZ11 813 aa6.26□□□□□ -1.41
XPC-203ENST00000452172 FAM161AQ3B820 660 aa6.25□□□□□ -1.41
XPC-203ENST00000452172 PCMTD1Q96MG8 357 aaPredicted RBP6.25□□□□□ -1.41
XPC-203ENST00000452172 RSPH6AQ9H0K4 717 aa6.25□□□□□ -1.41
XPC-203ENST00000452172 GPCPD1Q9NPB8 672 aa6.25□□□□□ -1.41
XPC-203ENST00000452172 LMTK3Q96Q04 1460 aa6.25□□□□□ -1.41
XPC-203ENST00000452172 ILDR2Q71H61 639 aa6.24□□□□□ -1.41
XPC-203ENST00000452172 CEP164Q9UPV0 1460 aa6.23□□□□□ -1.41
XPC-203ENST00000452172 SSTR3P32745 418 aaPredicted RBP6.23□□□□□ -1.41
XPC-203ENST00000452172 FLIIQ13045 1269 aa6.23□□□□□ -1.41
XPC-203ENST00000452172 SH3D19Q5HYK7 790 aa6.23□□□□□ -1.41
XPC-203ENST00000452172 C6orf132Q5T0Z8 1188 aa6.23□□□□□ -1.41
XPC-203ENST00000452172 PADI6Q6TGC4 694 aa6.23□□□□□ -1.41
XPC-203ENST00000452172 NLRP7Q8WX94 980 aa6.23□□□□□ -1.41
XPC-203ENST00000452172 STAC3Q96MF2 364 aa6.23□□□□□ -1.41
XPC-203ENST00000452172 PTPREP23469 700 aa6.22□□□□□ -1.41
XPC-203ENST00000452172 THSD4Q6ZMP0 1018 aa6.22□□□□□ -1.41
XPC-203ENST00000452172 METTL3Q86U44 580 aaKnown RBP6.22□□□□□ -1.41
XPC-203ENST00000452172 CERKQ8TCT0 537 aa6.22□□□□□ -1.41
XPC-203ENST00000452172 ZDHHC16Q969W1 377 aa6.22□□□□□ -1.41
XPC-203ENST00000452172 ONECUT3O60422 494 aaPredicted RBP6.21□□□□□ -1.42
XPC-203ENST00000452172 OATP04181 439 aa6.21□□□□□ -1.42
XPC-203ENST00000452172 PXYLP1Q8TE99 480 aa6.21□□□□□ -1.42
XPC-203ENST00000452172 FAM217BQ9NTX9 383 aaPredicted RBP6.21□□□□□ -1.42
XPC-203ENST00000452172 ADGRG1Q9Y653 693 aa6.21□□□□□ -1.42
XPC-203ENST00000452172 FANCD2Q9BXW9 1451 aa6.21□□□□□ -1.42
XPC-203ENST00000452172 COL9A1P20849 921 aa6.2□□□□□ -1.42
XPC-203ENST00000452172 TTC13Q8NBP0 860 aa6.2□□□□□ -1.42
XPC-203ENST00000452172 BEGAINQ9BUH8 593 aa6.2□□□□□ -1.42
XPC-203ENST00000452172 ZNF608Q9ULD9 1512 aaPredicted RBP6.2□□□□□ -1.42
XPC-203ENST00000452172 SKIV2LQ15477 1246 aaKnown RBP6.19□□□□□ -1.42
XPC-203ENST00000452172 PROX2Q3B8N5 592 aa6.19□□□□□ -1.42
XPC-203ENST00000452172 WNT2BQ93097 391 aa6.19□□□□□ -1.42
XPC-203ENST00000452172 KCNH8Q96L42 1107 aa6.19□□□□□ -1.42
XPC-203ENST00000452172 RBM27Q9P2N5 1060 aaKnown RBP6.19□□□□□ -1.42
XPC-203ENST00000452172 PEG3Q9GZU2 1588 aa6.18□□□□□ -1.42
XPC-203ENST00000452172 SMARCA4P51532 1647 aa6.18□□□□□ -1.42
XPC-203ENST00000452172 IFT140Q96RY7 1462 aa6.18□□□□□ -1.42
XPC-203ENST00000452172 PRSS12P56730 875 aa6.18□□□□□ -1.42
XPC-203ENST00000452172 URB2Q14146 1524 aaKnown RBP6.17□□□□□ -1.42
XPC-203ENST00000452172 IFFO2Q5TF58 517 aa6.17□□□□□ -1.42
XPC-203ENST00000452172 MRPL50Q8N5N7 158 aaKnown RBP6.17□□□□□ -1.42
XPC-203ENST00000452172 PROCA1Q8NCQ7 364 aaPredicted RBP6.17□□□□□ -1.42
XPC-203ENST00000452172 CDCA7LQ96GN5 454 aa6.17□□□□□ -1.42
XPC-203ENST00000452172 C1orf115Q9H7X2 142 aa6.17□□□□□ -1.42
XPC-203ENST00000452172 POLR3EQ9NVU0 708 aa6.17□□□□□ -1.42
XPC-203ENST00000452172 ERCC6L2Q5T890 1561 aa6.16□□□□□ -1.42
XPC-203ENST00000452172 ATP1B4Q9UN42 357 aaPredicted RBP6.16□□□□□ -1.42
XPC-203ENST00000452172 ARID3CA6NKF2 412 aa6.15□□□□□ -1.42
XPC-203ENST00000452172 UBTFP17480 764 aaKnown RBP6.15□□□□□ -1.42
XPC-203ENST00000452172 MCM6Q14566 821 aa6.15□□□□□ -1.42
XPC-203ENST00000452172 MYSM1Q5VVJ2 828 aa6.15□□□□□ -1.42
XPC-203ENST00000452172 RBM46Q8TBY0 533 aaKnown RBP6.15□□□□□ -1.42
XPC-203ENST00000452172 CLUAP1Q96AJ1 413 aa6.15□□□□□ -1.42
XPC-203ENST00000452172 ARID3AQ99856 593 aa6.15□□□□□ -1.42
XPC-203ENST00000452172 FAM198AQ9UFP1 575 aa6.15□□□□□ -1.42
XPC-203ENST00000452172 A6NJR5 290 aa6.14□□□□□ -1.43
XPC-203ENST00000452172 GOLGA8CPA6NN73 597 aa6.14□□□□□ -1.43
XPC-203ENST00000452172 TBC1D2Q9BYX2 928 aa6.14□□□□□ -1.43
XPC-203ENST00000452172 CFTRP13569 1480 aa6.14□□□□□ -1.43
XPC-203ENST00000452172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.13□□□□□ -1.43
XPC-203ENST00000452172 A0A0G2JS52 829 aa6.13□□□□□ -1.43
XPC-203ENST00000452172 PPP1R3GB7ZBB8 358 aa6.13□□□□□ -1.43
XPC-203ENST00000452172 APBB1O00213 710 aa6.13□□□□□ -1.43
XPC-203ENST00000452172 CLK2P49760 499 aaKnown RBP6.13□□□□□ -1.43
XPC-203ENST00000452172 RABGEF1Q9UJ41 708 aa6.13□□□□□ -1.43
XPC-203ENST00000452172 RCCD1A6NED2 376 aa6.12□□□□□ -1.43
XPC-203ENST00000452172 TRAK2O60296 914 aa6.12□□□□□ -1.43
XPC-203ENST00000452172 BCAMP50895 628 aa6.12□□□□□ -1.43
XPC-203ENST00000452172 CHMP7Q8WUX9 453 aaPredicted RBP6.12□□□□□ -1.43
XPC-203ENST00000452172 EYA1Q99502 592 aa6.12□□□□□ -1.43
XPC-203ENST00000452172 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.12□□□□□ -1.43
XPC-203ENST00000452172 KIAA1468Q9P260 1216 aa6.12□□□□□ -1.43
XPC-203ENST00000452172 DISP3Q9P2K9 1392 aa6.12□□□□□ -1.43
XPC-203ENST00000452172 TSKSQ9UJT2 592 aa6.12□□□□□ -1.43
XPC-203ENST00000452172 AQRO60306 1485 aaKnown RBP eCLIP6.11□□□□□ -1.431e-7■■■■■ 38.1
XPC-203ENST00000452172 GAPVD1Q14C86 1478 aa6.11□□□□□ -1.43
XPC-203ENST00000452172 C3orf80F5H4A9 247 aa6.11□□□□□ -1.43
XPC-203ENST00000452172 FAM69CQ0P6D2 419 aa6.11□□□□□ -1.43
XPC-203ENST00000452172 NBPF3Q9H094 633 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms