RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 QRICH2Q9H0J4 1663 aa9.45□□□□□ -0.9
USP46-202ENST00000451218 CYB5RLQ6IPT4 315 aa9.44□□□□□ -0.9
USP46-202ENST00000451218 TESK2Q96S53 571 aa9.44□□□□□ -0.9
USP46-202ENST00000451218 NBPF1Q3BBV0 1214 aa9.43□□□□□ -0.9
USP46-202ENST00000451218 DDX10Q13206 875 aaKnown RBP9.43□□□□□ -0.9
USP46-202ENST00000451218 UBR1Q8IWV7 1749 aa9.42□□□□□ -0.9
USP46-202ENST00000451218 DISP3Q9P2K9 1392 aa9.42□□□□□ -0.9
USP46-202ENST00000451218 CCDC184Q52MB2 194 aa9.41□□□□□ -0.9
USP46-202ENST00000451218 ERVK-7P63135 1459 aa9.41□□□□□ -0.9
USP46-202ENST00000451218 C3P01024 1663 aa9.4□□□□□ -0.9
USP46-202ENST00000451218 PTPRMP28827 1452 aa9.4□□□□□ -0.9
USP46-202ENST00000451218 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP46-202ENST00000451218 KIF3BO15066 747 aa9.38□□□□□ -0.91
USP46-202ENST00000451218 KNDC1Q76NI1 1749 aa9.38□□□□□ -0.91
USP46-202ENST00000451218 USP32Q8NFA0 1604 aa9.38□□□□□ -0.91
USP46-202ENST00000451218 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
USP46-202ENST00000451218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.38□□□□□ -0.91
USP46-202ENST00000451218 TULP4Q9NRJ4 1543 aa9.37□□□□□ -0.91
USP46-202ENST00000451218 SCAF11Q99590 1463 aaKnown RBP9.37□□□□□ -0.91
USP46-202ENST00000451218 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
USP46-202ENST00000451218 SHPRHQ149N8 1683 aa9.36□□□□□ -0.91
USP46-202ENST00000451218 ADGRF5Q8IZF2 1346 aa9.36□□□□□ -0.91
USP46-202ENST00000451218 PER1O15534 1290 aaPredicted RBP9.36□□□□□ -0.91
USP46-202ENST00000451218 ARID4BQ4LE39 1312 aaPredicted RBP9.35□□□□□ -0.91
USP46-202ENST00000451218 ROCK2O75116 1388 aaKnown RBP9.35□□□□□ -0.91
USP46-202ENST00000451218 CCER2I3L3R5 266 aa9.35□□□□□ -0.91
USP46-202ENST00000451218 ST20-MTHFSA0A0A6YYL1 179 aa9.34□□□□□ -0.91
USP46-202ENST00000451218 FAM69CQ0P6D2 419 aa9.34□□□□□ -0.91
USP46-202ENST00000451218 FER1L4A9Z1Z3 1794 aa9.34□□□□□ -0.91
USP46-202ENST00000451218 A2ML1A8K2U0 1454 aa9.33□□□□□ -0.92
USP46-202ENST00000451218 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
USP46-202ENST00000451218 ANKRD26Q9UPS8 1709 aa9.33□□□□□ -0.92
USP46-202ENST00000451218 NPM1P06748 294 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP46-202ENST00000451218 DCAF8L1A6NGE4 600 aa9.32□□□□□ -0.92
USP46-202ENST00000451218 NPM3O75607 178 aaKnown RBP9.32□□□□□ -0.92
USP46-202ENST00000451218 PRKRIP1Q9H875 184 aaPredicted RBP9.32□□□□□ -0.92
USP46-202ENST00000451218 KANK1Q14678 1352 aa9.32□□□□□ -0.92
USP46-202ENST00000451218 PARD3Q8TEW0 1356 aa9.32□□□□□ -0.92
USP46-202ENST00000451218 SBNO2Q9Y2G9 1366 aa9.31□□□□□ -0.92
USP46-202ENST00000451218 TOPAZ1Q8N9V7 1692 aa9.3□□□□□ -0.92
USP46-202ENST00000451218 ADAMTSL3P82987 1691 aa9.3□□□□□ -0.92
USP46-202ENST00000451218 CD163L1Q9NR16 1453 aa9.3□□□□□ -0.92
USP46-202ENST00000451218 ZNF142P52746 1687 aaPredicted RBP9.3□□□□□ -0.92
USP46-202ENST00000451218 LRPPRCP42704 1394 aaKnown RBP9.3□□□□□ -0.92
USP46-202ENST00000451218 KDM2AQ9Y2K7 1162 aa9.3□□□□□ -0.92
USP46-202ENST00000451218 RGL3Q3MIN7 710 aa9.29□□□□□ -0.92
USP46-202ENST00000451218 CARD11Q9BXL7 1154 aa9.29□□□□□ -0.92
USP46-202ENST00000451218 NRKQ7Z2Y5 1582 aa9.28□□□□□ -0.92
USP46-202ENST00000451218 MARF1Q9Y4F3 1742 aaKnown RBP9.28□□□□□ -0.92
USP46-202ENST00000451218 MED14O60244 1454 aa9.27□□□□□ -0.92
USP46-202ENST00000451218 NLRP1Q9C000 1473 aa9.27□□□□□ -0.93
USP46-202ENST00000451218 CPS1P31327 1500 aa9.27□□□□□ -0.93
USP46-202ENST00000451218 DLC1Q96QB1 1528 aa9.27□□□□□ -0.93
USP46-202ENST00000451218 AKAP12Q02952 1782 aa9.27□□□□□ -0.93
USP46-202ENST00000451218 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.27□□□□□ -0.93
USP46-202ENST00000451218 RIMS1Q86UR5 1692 aaKnown RBP9.26□□□□□ -0.93
USP46-202ENST00000451218 IDI1Q13907 227 aa9.25□□□□□ -0.93
USP46-202ENST00000451218 C14orf93Q9H972 538 aaKnown RBP9.25□□□□□ -0.93
USP46-202ENST00000451218 MON2Q7Z3U7 1717 aa9.25□□□□□ -0.93
USP46-202ENST00000451218 CFAP70Q5T0N1 1121 aa9.25□□□□□ -0.93
USP46-202ENST00000451218 FBXO31Q5XUX0 539 aaPredicted RBP9.25□□□□□ -0.93
USP46-202ENST00000451218 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
USP46-202ENST00000451218 KIF20BQ96Q89 1820 aa9.25□□□□□ -0.93
USP46-202ENST00000451218 ADGRB2O60241 1585 aa9.25□□□□□ -0.93
USP46-202ENST00000451218 YTHDC1Q96MU7 727 aaKnown RBP9.25□□□□□ -0.93
USP46-202ENST00000451218 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
USP46-202ENST00000451218 SLIT1O75093 1534 aa9.24□□□□□ -0.93
USP46-202ENST00000451218 ARHGAP23Q9P227 1491 aa9.24□□□□□ -0.93
USP46-202ENST00000451218 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
USP46-202ENST00000451218 GGT6Q6P531 493 aa9.24□□□□□ -0.93
USP46-202ENST00000451218 WASHC2CQ9Y4E1 1318 aa9.23□□□□□ -0.93
USP46-202ENST00000451218 BLMP54132 1417 aaPredicted RBP9.22□□□□□ -0.93
USP46-202ENST00000451218 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
USP46-202ENST00000451218 AMER1Q5JTC6 1135 aaPredicted RBP9.21□□□□□ -0.94
USP46-202ENST00000451218 TECPR2O15040 1411 aa9.21□□□□□ -0.94
USP46-202ENST00000451218 NALCNQ8IZF0 1738 aa9.21□□□□□ -0.94
USP46-202ENST00000451218 ADAMTS13Q76LX8 1427 aa9.21□□□□□ -0.94
USP46-202ENST00000451218 ZMYM3Q14202 1370 aa9.21□□□□□ -0.94
USP46-202ENST00000451218 NPC1L1Q9UHC9 1359 aa9.21□□□□□ -0.94
USP46-202ENST00000451218 GTF3C3Q9Y5Q9 886 aa9.2□□□□□ -0.94
USP46-202ENST00000451218 RGPD8O14715 1765 aaPredicted RBP9.2□□□□□ -0.94
USP46-202ENST00000451218 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
USP46-202ENST00000451218 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
USP46-202ENST00000451218 KTN1Q86UP2 1357 aaKnown RBP9.19□□□□□ -0.94
USP46-202ENST00000451218 ANP32CO43423 234 aa9.19□□□□□ -0.94
USP46-202ENST00000451218 PNISRQ8TF01 805 aaKnown RBP9.19□□□□□ -0.94
USP46-202ENST00000451218 COL3A1P02461 1466 aaPredicted RBP9.18□□□□□ -0.94
USP46-202ENST00000451218 YTHDC2Q9H6S0 1430 aaKnown RBP9.18□□□□□ -0.94
USP46-202ENST00000451218 CHD2O14647 1828 aaKnown RBP9.18□□□□□ -0.94
USP46-202ENST00000451218 INSRP06213 1382 aa9.18□□□□□ -0.94
USP46-202ENST00000451218 CNKSR2Q8WXI2 1034 aa9.17□□□□□ -0.94
USP46-202ENST00000451218 PTPRUQ92729 1446 aa9.17□□□□□ -0.94
USP46-202ENST00000451218 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
USP46-202ENST00000451218 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
USP46-202ENST00000451218 RIMS2Q9UQ26 1411 aa9.16□□□□□ -0.94
USP46-202ENST00000451218 IQSEC2Q5JU85 1478 aa9.16□□□□□ -0.94
USP46-202ENST00000451218 METP08581 1390 aa9.16□□□□□ -0.94
USP46-202ENST00000451218 CEP170BQ9Y4F5 1589 aaPredicted RBP9.16□□□□□ -0.94
USP46-202ENST00000451218 ITSN1Q15811 1721 aa9.15□□□□□ -0.94
USP46-202ENST00000451218 PLEKHH1Q9ULM0 1364 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms