RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 ANKRD30AQ9BXX3 1397 aa17.95■□□□□ 0.46
CHFR-205ENST00000450056 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
CHFR-205ENST00000450056 UHRF1BP1LA0JNW5 1464 aa17.94■□□□□ 0.46
CHFR-205ENST00000450056 PZPP20742 1482 aa17.94■□□□□ 0.46
CHFR-205ENST00000450056 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
CHFR-205ENST00000450056 MYH16Q9H6N6 1097 aa17.93■□□□□ 0.46
CHFR-205ENST00000450056 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
CHFR-205ENST00000450056 PPP2R1AP30153 589 aa17.92■□□□□ 0.46
CHFR-205ENST00000450056 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
CHFR-205ENST00000450056 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
CHFR-205ENST00000450056 TBC1D2Q9BYX2 928 aa17.92■□□□□ 0.46
CHFR-205ENST00000450056 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
CHFR-205ENST00000450056 ADGRL2O95490 1459 aa17.91■□□□□ 0.46
CHFR-205ENST00000450056 ZCCHC11Q5TAX3 1644 aaKnown RBP17.91■□□□□ 0.46
CHFR-205ENST00000450056 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
CHFR-205ENST00000450056 TRAK2O60296 914 aa17.9■□□□□ 0.46
CHFR-205ENST00000450056 SLFN5Q08AF3 891 aa17.89■□□□□ 0.45
CHFR-205ENST00000450056 TTC37Q6PGP7 1564 aa17.89■□□□□ 0.45
CHFR-205ENST00000450056 MCM4P33991 863 aa17.88■□□□□ 0.45
CHFR-205ENST00000450056 CENPJQ9HC77 1338 aaPredicted RBP17.88■□□□□ 0.45
CHFR-205ENST00000450056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
CHFR-205ENST00000450056 KDM5CP41229 1560 aa17.88■□□□□ 0.45
CHFR-205ENST00000450056 USP19O94966 1318 aa17.87■□□□□ 0.45
CHFR-205ENST00000450056 SAMD9LQ8IVG5 1584 aa17.86■□□□□ 0.45
CHFR-205ENST00000450056 TNNQ9UQP3 1299 aa17.86■□□□□ 0.45
CHFR-205ENST00000450056 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
CHFR-205ENST00000450056 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
CHFR-205ENST00000450056 ARHGEF5Q12774 1597 aa17.86■□□□□ 0.45
CHFR-205ENST00000450056 SHANK2Q9UPX8 1470 aa17.86■□□□□ 0.45
CHFR-205ENST00000450056 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
CHFR-205ENST00000450056 PDZRN3Q9UPQ7 1066 aa17.85■□□□□ 0.45
CHFR-205ENST00000450056 MBD5Q9P267 1494 aa17.84■□□□□ 0.45
CHFR-205ENST00000450056 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.45
CHFR-205ENST00000450056 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
CHFR-205ENST00000450056 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
CHFR-205ENST00000450056 ESPNB1AK53 854 aa17.81■□□□□ 0.44
CHFR-205ENST00000450056 MYO5CQ9NQX4 1742 aa17.81■□□□□ 0.44
CHFR-205ENST00000450056 E9PSI1 815 aa17.81■□□□□ 0.44
CHFR-205ENST00000450056 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
CHFR-205ENST00000450056 TESK2Q96S53 571 aa17.8■□□□□ 0.44
CHFR-205ENST00000450056 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
CHFR-205ENST00000450056 CLCN1P35523 988 aa17.8■□□□□ 0.44
CHFR-205ENST00000450056 GRPEL1Q9HAV7 217 aa17.8■□□□□ 0.44
CHFR-205ENST00000450056 RBM10P98175 930 aaKnown RBP17.79■□□□□ 0.44
CHFR-205ENST00000450056 FTSJ3Q8IY81 847 aaKnown RBP17.79■□□□□ 0.44
CHFR-205ENST00000450056 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
CHFR-205ENST00000450056 CHMP5Q9NZZ3 219 aa17.79■□□□□ 0.44
CHFR-205ENST00000450056 PCDHB15Q9Y5E8 787 aa17.79■□□□□ 0.44
CHFR-205ENST00000450056 MRE11P49959 708 aa17.79■□□□□ 0.44
CHFR-205ENST00000450056 RRP9O43818 475 aaKnown RBP17.78■□□□□ 0.44
CHFR-205ENST00000450056 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
CHFR-205ENST00000450056 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
CHFR-205ENST00000450056 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
CHFR-205ENST00000450056 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.43
CHFR-205ENST00000450056 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.43
CHFR-205ENST00000450056 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.43
CHFR-205ENST00000450056 ANTXR1Q9H6X2 564 aa17.77■□□□□ 0.43
CHFR-205ENST00000450056 ERBINQ96RT1 1412 aa17.76■□□□□ 0.43
CHFR-205ENST00000450056 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
CHFR-205ENST00000450056 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
CHFR-205ENST00000450056 RWDD1Q9H446 243 aaPredicted RBP17.75■□□□□ 0.43
CHFR-205ENST00000450056 ZMYM4Q5VZL5 1548 aa17.74■□□□□ 0.43
CHFR-205ENST00000450056 RLBP1P12271 317 aa17.74■□□□□ 0.43
CHFR-205ENST00000450056 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
CHFR-205ENST00000450056 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
CHFR-205ENST00000450056 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
CHFR-205ENST00000450056 UHRF1BP1Q6BDS2 1440 aa17.73■□□□□ 0.43
CHFR-205ENST00000450056 SYCP2Q9BX26 1530 aa17.73■□□□□ 0.43
CHFR-205ENST00000450056 PDE3AQ14432 1141 aa17.72■□□□□ 0.43
CHFR-205ENST00000450056 FAM13BQ9NYF5 915 aa17.72■□□□□ 0.43
CHFR-205ENST00000450056 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
CHFR-205ENST00000450056 PLCH2O75038 1416 aa17.71■□□□□ 0.43
CHFR-205ENST00000450056 EIF3AQ14152 1382 aaKnown RBP17.71■□□□□ 0.43
CHFR-205ENST00000450056 KIAA1211Q6ZU35 1233 aa17.71■□□□□ 0.42
CHFR-205ENST00000450056 NKTRP30414 1462 aaKnown RBP17.7■□□□□ 0.42
CHFR-205ENST00000450056 AMER1Q5JTC6 1135 aaPredicted RBP17.7■□□□□ 0.42
CHFR-205ENST00000450056 ITPRIPQ8IWB1 547 aa17.7■□□□□ 0.42
CHFR-205ENST00000450056 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
CHFR-205ENST00000450056 ARHGEF12Q9NZN5 1544 aa17.7■□□□□ 0.42
CHFR-205ENST00000450056 KDM5DQ9BY66 1539 aa17.69■□□□□ 0.42
CHFR-205ENST00000450056 DDX11L8A8MPP1 907 aa17.69■□□□□ 0.42
CHFR-205ENST00000450056 ARAP3Q8WWN8 1544 aa17.69■□□□□ 0.42
CHFR-205ENST00000450056 MSNP26038 577 aaKnown RBP17.69■□□□□ 0.42
CHFR-205ENST00000450056 WWC1Q8IX03 1113 aa17.69■□□□□ 0.42
CHFR-205ENST00000450056 FSD2A1L4K1 749 aa17.68■□□□□ 0.42
CHFR-205ENST00000450056 PLEKHH2Q8IVE3 1493 aa17.68■□□□□ 0.42
CHFR-205ENST00000450056 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
CHFR-205ENST00000450056 WDR7Q9Y4E6 1490 aa17.68■□□□□ 0.42
CHFR-205ENST00000450056 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
CHFR-205ENST00000450056 PRAG1Q86YV5 1406 aa17.67■□□□□ 0.42
CHFR-205ENST00000450056 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
CHFR-205ENST00000450056 ABCC1P33527 1531 aa17.66■□□□□ 0.42
CHFR-205ENST00000450056 RSPH4AQ5TD94 716 aa17.66■□□□□ 0.42
CHFR-205ENST00000450056 GAS2L3Q86XJ1 694 aa17.66■□□□□ 0.42
CHFR-205ENST00000450056 GBP4Q96PP9 640 aa17.66■□□□□ 0.42
CHFR-205ENST00000450056 ABCA9Q8IUA7 1624 aa17.65■□□□□ 0.42
CHFR-205ENST00000450056 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
CHFR-205ENST00000450056 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
CHFR-205ENST00000450056 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
CHFR-205ENST00000450056 R3HCC1Q9Y3T6 440 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms