RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
ITGB4-202ENST00000449880 HDAC5Q9UQL6 1122 aa17.19■□□□□ 0.34
ITGB4-202ENST00000449880 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
ITGB4-202ENST00000449880 E9PSI1 815 aa17.19■□□□□ 0.34
ITGB4-202ENST00000449880 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
ITGB4-202ENST00000449880 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
ITGB4-202ENST00000449880 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
ITGB4-202ENST00000449880 KIF7Q2M1P5 1343 aa17.18■□□□□ 0.34
ITGB4-202ENST00000449880 ZNF771Q7L3S4 317 aaPredicted RBP17.18■□□□□ 0.34
ITGB4-202ENST00000449880 CDK13Q14004 1512 aaKnown RBP17.18■□□□□ 0.34
ITGB4-202ENST00000449880 GPS2Q13227 327 aa17.17■□□□□ 0.34
ITGB4-202ENST00000449880 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
ITGB4-202ENST00000449880 DAPK1P53355 1430 aa17.17■□□□□ 0.34
ITGB4-202ENST00000449880 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
ITGB4-202ENST00000449880 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
ITGB4-202ENST00000449880 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
ITGB4-202ENST00000449880 CCDC146Q8IYE0 955 aa17.15■□□□□ 0.34
ITGB4-202ENST00000449880 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.34
ITGB4-202ENST00000449880 STK31Q9BXU1 1019 aa17.14■□□□□ 0.34
ITGB4-202ENST00000449880 TEX35Q5T0J7 233 aa17.14■□□□□ 0.33
ITGB4-202ENST00000449880 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
ITGB4-202ENST00000449880 SLC4A3P48751 1232 aa17.13■□□□□ 0.33
ITGB4-202ENST00000449880 GPATCH3Q96I76 525 aa17.13■□□□□ 0.33
ITGB4-202ENST00000449880 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
ITGB4-202ENST00000449880 CYB5RLQ6IPT4 315 aa17.13■□□□□ 0.33
ITGB4-202ENST00000449880 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
ITGB4-202ENST00000449880 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
ITGB4-202ENST00000449880 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
ITGB4-202ENST00000449880 FAM13BQ9NYF5 915 aa17.12■□□□□ 0.33
ITGB4-202ENST00000449880 APBB1O00213 710 aa17.12■□□□□ 0.33
ITGB4-202ENST00000449880 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
ITGB4-202ENST00000449880 KIAA1107Q9UPP5 1409 aa17.11■□□□□ 0.33
ITGB4-202ENST00000449880 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
ITGB4-202ENST00000449880 NUCB2P80303 420 aa17.11■□□□□ 0.33
ITGB4-202ENST00000449880 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
ITGB4-202ENST00000449880 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
ITGB4-202ENST00000449880 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
ITGB4-202ENST00000449880 TPM3P06753 285 aa17.1■□□□□ 0.33
ITGB4-202ENST00000449880 NAIPQ13075 1403 aa17.1■□□□□ 0.33
ITGB4-202ENST00000449880 PLEKHH2Q8IVE3 1493 aa17.1■□□□□ 0.33
ITGB4-202ENST00000449880 DIAPH3Q9NSV4 1193 aa17.09■□□□□ 0.33
ITGB4-202ENST00000449880 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
ITGB4-202ENST00000449880 PTPN23Q9H3S7 1636 aa17.09■□□□□ 0.33
ITGB4-202ENST00000449880 RRP9O43818 475 aaKnown RBP17.08■□□□□ 0.33
ITGB4-202ENST00000449880 EVC2Q86UK5 1308 aa17.08■□□□□ 0.33
ITGB4-202ENST00000449880 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.33
ITGB4-202ENST00000449880 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
ITGB4-202ENST00000449880 TAF7LQ5H9L4 462 aa17.07■□□□□ 0.32
ITGB4-202ENST00000449880 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
ITGB4-202ENST00000449880 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
ITGB4-202ENST00000449880 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
ITGB4-202ENST00000449880 MAGI1Q96QZ7 1491 aaPredicted RBP17.06■□□□□ 0.32
ITGB4-202ENST00000449880 GOLGA6L19H0YKK7 550 aa17.06■□□□□ 0.32
ITGB4-202ENST00000449880 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
ITGB4-202ENST00000449880 CCDC173Q0VFZ6 552 aa17.05■□□□□ 0.32
ITGB4-202ENST00000449880 ANO8Q9HCE9 1232 aaPredicted RBP17.05■□□□□ 0.32
ITGB4-202ENST00000449880 NOM1Q5C9Z4 860 aaKnown RBP17.05■□□□□ 0.32
ITGB4-202ENST00000449880 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
ITGB4-202ENST00000449880 CCDC66A2RUB6 948 aa17.05■□□□□ 0.32
ITGB4-202ENST00000449880 REC8O95072 547 aa17.04■□□□□ 0.32
ITGB4-202ENST00000449880 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
ITGB4-202ENST00000449880 DDX19BQ9UMR2 479 aa17.04■□□□□ 0.32
ITGB4-202ENST00000449880 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
ITGB4-202ENST00000449880 NOC3LQ8WTT2 800 aaKnown RBP17.03■□□□□ 0.32
ITGB4-202ENST00000449880 HMGN5P82970 282 aaKnown RBP17.03■□□□□ 0.32
ITGB4-202ENST00000449880 NBPF8Q3BBV2 869 aa17.03■□□□□ 0.32
ITGB4-202ENST00000449880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.03■□□□□ 0.32
ITGB4-202ENST00000449880 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
ITGB4-202ENST00000449880 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
ITGB4-202ENST00000449880 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.32
ITGB4-202ENST00000449880 ARGLU1Q9NWB6 273 aaPredicted RBP17.02■□□□□ 0.31
ITGB4-202ENST00000449880 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
ITGB4-202ENST00000449880 G3V3G9 751 aa17.01■□□□□ 0.31
ITGB4-202ENST00000449880 PLIN1O60240 522 aa17.01■□□□□ 0.31
ITGB4-202ENST00000449880 DCAF8Q5TAQ9 597 aa17.01■□□□□ 0.31
ITGB4-202ENST00000449880 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
ITGB4-202ENST00000449880 PLB1Q6P1J6 1458 aa17.01■□□□□ 0.31
ITGB4-202ENST00000449880 CAMSAP2Q08AD1 1489 aa17■□□□□ 0.31
ITGB4-202ENST00000449880 AMPHP49418 695 aa17■□□□□ 0.31
ITGB4-202ENST00000449880 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
ITGB4-202ENST00000449880 FAM69CQ0P6D2 419 aa17■□□□□ 0.31
ITGB4-202ENST00000449880 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
ITGB4-202ENST00000449880 CCDC70Q6NSX1 233 aa16.99■□□□□ 0.31
ITGB4-202ENST00000449880 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
ITGB4-202ENST00000449880 C22orf23Q9BZE7 217 aa16.99■□□□□ 0.31
ITGB4-202ENST00000449880 BECN2A8MW95 431 aa16.98■□□□□ 0.31
ITGB4-202ENST00000449880 LETM1O95202 739 aaPredicted RBP16.98■□□□□ 0.31
ITGB4-202ENST00000449880 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
ITGB4-202ENST00000449880 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
ITGB4-202ENST00000449880 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
ITGB4-202ENST00000449880 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
ITGB4-202ENST00000449880 TRAK2O60296 914 aa16.98■□□□□ 0.31
ITGB4-202ENST00000449880 ABCC5O15440 1437 aa16.98■□□□□ 0.31
ITGB4-202ENST00000449880 SMG6Q86US8 1419 aaKnown RBP16.98■□□□□ 0.31
ITGB4-202ENST00000449880 R3HCC1Q9Y3T6 440 aaKnown RBP16.98■□□□□ 0.31
ITGB4-202ENST00000449880 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
ITGB4-202ENST00000449880 NINLQ9Y2I6 1382 aa16.97■□□□□ 0.31
ITGB4-202ENST00000449880 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
ITGB4-202ENST00000449880 KIF14Q15058 1648 aa16.96■□□□□ 0.31
ITGB4-202ENST00000449880 ACBD3Q9H3P7 528 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms