RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 MYOM2P54296 1465 aa29.8■■■□□ 2.36
NPAS1-202ENST00000449844 FKBP8Q14318 412 aa29.79■■■□□ 2.36
NPAS1-202ENST00000449844 SYNMO15061 1565 aa29.78■■■□□ 2.36
NPAS1-202ENST00000449844 KIAA1210Q9ULL0 1709 aa29.77■■■□□ 2.36
NPAS1-202ENST00000449844 PIK3C2BO00750 1634 aa29.77■■■□□ 2.36
NPAS1-202ENST00000449844 CHGAP10645 457 aaKnown RBP29.75■■■□□ 2.35
NPAS1-202ENST00000449844 PREX1Q8TCU6 1659 aa29.74■■■□□ 2.35
NPAS1-202ENST00000449844 FAM9BQ8IZU0 186 aa29.74■■■□□ 2.35
NPAS1-202ENST00000449844 IQGAP1P46940 1657 aa29.73■■■□□ 2.35
NPAS1-202ENST00000449844 PPLO60437 1756 aa29.72■■■□□ 2.35
NPAS1-202ENST00000449844 KTN1Q86UP2 1357 aaKnown RBP29.71■■■□□ 2.35
NPAS1-202ENST00000449844 ZBED9Q6R2W3 1325 aa29.69■■■□□ 2.34
NPAS1-202ENST00000449844 CLTCQ00610 1675 aaKnown RBP29.68■■■□□ 2.34
NPAS1-202ENST00000449844 PPP6R1Q9UPN7 881 aa29.68■■■□□ 2.34
NPAS1-202ENST00000449844 NRXN1Q9ULB1 1477 aa29.67■■■□□ 2.34
NPAS1-202ENST00000449844 ADGRF5Q8IZF2 1346 aa29.66■■■□□ 2.34
NPAS1-202ENST00000449844 SCAF11Q99590 1463 aaKnown RBP29.65■■■□□ 2.34
NPAS1-202ENST00000449844 RPGRIP1LQ68CZ1 1315 aa29.63■■■□□ 2.33
NPAS1-202ENST00000449844 RALBP1Q15311 655 aa29.62■■■□□ 2.33
NPAS1-202ENST00000449844 TESK2Q96S53 571 aa29.61■■■□□ 2.33
NPAS1-202ENST00000449844 SLC52A1Q9NWF4 448 aa29.61■■■□□ 2.33
NPAS1-202ENST00000449844 ERVK-7P63135 1459 aa29.6■■■□□ 2.33
NPAS1-202ENST00000449844 BCANQ96GW7 911 aa29.59■■■□□ 2.33
NPAS1-202ENST00000449844 MLECQ14165 292 aa29.58■■■□□ 2.33
NPAS1-202ENST00000449844 CFAP70Q5T0N1 1121 aa29.58■■■□□ 2.33
NPAS1-202ENST00000449844 IDI1Q13907 227 aa29.57■■■□□ 2.32
NPAS1-202ENST00000449844 MYO5BQ9ULV0 1848 aa29.57■■■□□ 2.32
NPAS1-202ENST00000449844 EIF3AQ14152 1382 aaKnown RBP29.57■■■□□ 2.32
NPAS1-202ENST00000449844 NEXMIFQ5QGS0 1516 aa29.56■■■□□ 2.32
NPAS1-202ENST00000449844 MYBBP1AQ9BQG0 1328 aaKnown RBP29.56■■■□□ 2.32
NPAS1-202ENST00000449844 PIK3C2GO75747 1445 aa29.56■■■□□ 2.32
NPAS1-202ENST00000449844 BRD4O60885 1362 aaPredicted RBP29.55■■■□□ 2.32
NPAS1-202ENST00000449844 DISP3Q9P2K9 1392 aa29.55■■■□□ 2.32
NPAS1-202ENST00000449844 TMF1P82094 1093 aa29.55■■■□□ 2.32
NPAS1-202ENST00000449844 TMEM131LA2VDJ0 1609 aa29.54■■■□□ 2.32
NPAS1-202ENST00000449844 SETBP1Q9Y6X0 1596 aa29.54■■■□□ 2.32
NPAS1-202ENST00000449844 FBXO31Q5XUX0 539 aaPredicted RBP29.53■■■□□ 2.32
NPAS1-202ENST00000449844 CNGB1Q14028 1251 aaPredicted RBP29.52■■■□□ 2.32
NPAS1-202ENST00000449844 TMC1Q8TDI8 760 aa29.52■■■□□ 2.32
NPAS1-202ENST00000449844 PNISRQ8TF01 805 aaKnown RBP29.51■■■□□ 2.31
NPAS1-202ENST00000449844 SPATA31D1Q6ZQQ2 1576 aa29.51■■■□□ 2.31
NPAS1-202ENST00000449844 TRHP20396 242 aaPredicted RBP29.49■■■□□ 2.31
NPAS1-202ENST00000449844 PARD3Q8TEW0 1356 aa29.48■■■□□ 2.31
NPAS1-202ENST00000449844 PER1O15534 1290 aaPredicted RBP29.48■■■□□ 2.31
NPAS1-202ENST00000449844 ESF1Q9H501 851 aaKnown RBP29.48■■■□□ 2.31
NPAS1-202ENST00000449844 ERICH6BQ5W0A0 696 aa29.47■■■□□ 2.31
NPAS1-202ENST00000449844 VGFO15240 615 aaPredicted RBP29.47■■■□□ 2.31
NPAS1-202ENST00000449844 C14orf93Q9H972 538 aaKnown RBP29.45■■■□□ 2.31
NPAS1-202ENST00000449844 LRPPRCP42704 1394 aaKnown RBP29.45■■■□□ 2.3
NPAS1-202ENST00000449844 MYO3AQ8NEV4 1616 aa29.44■■■□□ 2.3
NPAS1-202ENST00000449844 ADGRB1O14514 1584 aa29.43■■■□□ 2.3
NPAS1-202ENST00000449844 ZFYVE9O95405 1425 aa29.42■■■□□ 2.3
NPAS1-202ENST00000449844 NUTM2DQ5VT03 806 aaPredicted RBP29.42■■■□□ 2.3
NPAS1-202ENST00000449844 NLRP13Q86W25 1043 aa29.41■■■□□ 2.3
NPAS1-202ENST00000449844 SMG6Q86US8 1419 aaKnown RBP29.41■■■□□ 2.3
NPAS1-202ENST00000449844 CDCA8Q53HL2 280 aa29.39■■■□□ 2.3
NPAS1-202ENST00000449844 STAG3Q9UJ98 1225 aa29.38■■■□□ 2.29
NPAS1-202ENST00000449844 ZMYM3Q14202 1370 aa29.38■■■□□ 2.29
NPAS1-202ENST00000449844 TSHZ2Q9NRE2 1034 aa29.38■■■□□ 2.29
NPAS1-202ENST00000449844 PANK3Q9H999 370 aa29.37■■■□□ 2.29
NPAS1-202ENST00000449844 KDM5AP29375 1690 aaKnown RBP29.37■■■□□ 2.29
NPAS1-202ENST00000449844 SLC24A1O60721 1099 aa29.35■■■□□ 2.29
NPAS1-202ENST00000449844 QRICH2Q9H0J4 1663 aa29.33■■■□□ 2.29
NPAS1-202ENST00000449844 A2ML1A8K2U0 1454 aa29.32■■■□□ 2.28
NPAS1-202ENST00000449844 TMEM132EQ6IEE7 984 aa29.32■■■□□ 2.28
NPAS1-202ENST00000449844 NUDCQ9Y266 331 aa29.32■■■□□ 2.28
NPAS1-202ENST00000449844 CENPJQ9HC77 1338 aaPredicted RBP29.31■■■□□ 2.28
NPAS1-202ENST00000449844 TRAK1Q9UPV9 953 aa29.31■■■□□ 2.28
NPAS1-202ENST00000449844 SBNO2Q9Y2G9 1366 aa29.31■■■□□ 2.28
NPAS1-202ENST00000449844 MYOM1P52179 1685 aa29.3■■■□□ 2.28
NPAS1-202ENST00000449844 ARHGEF28Q8N1W1 1705 aaKnown RBP29.29■■■□□ 2.28
NPAS1-202ENST00000449844 IRX6P78412 446 aaPredicted RBP29.28■■■□□ 2.28
NPAS1-202ENST00000449844 INSRP06213 1382 aa29.27■■■□□ 2.28
NPAS1-202ENST00000449844 TNRQ92752 1358 aa29.25■■■□□ 2.27
NPAS1-202ENST00000449844 ASXL1Q8IXJ9 1541 aa29.25■■■□□ 2.27
NPAS1-202ENST00000449844 CC2D1BQ5T0F9 858 aaKnown RBP29.25■■■□□ 2.27
NPAS1-202ENST00000449844 PPP4R2Q9NY27 417 aa29.24■■■□□ 2.27
NPAS1-202ENST00000449844 RIMS2Q9UQ26 1411 aa29.24■■■□□ 2.27
NPAS1-202ENST00000449844 DNAJC5Q9H3Z4 198 aa29.23■■■□□ 2.27
NPAS1-202ENST00000449844 FER1L4A9Z1Z3 1794 aa29.22■■■□□ 2.27
NPAS1-202ENST00000449844 ALKQ9UM73 1620 aa29.21■■■□□ 2.27
NPAS1-202ENST00000449844 SENP3Q9H4L4 574 aaPredicted RBP29.2■■■□□ 2.27
NPAS1-202ENST00000449844 KNSTRNQ9Y448 316 aa29.2■■■□□ 2.26
NPAS1-202ENST00000449844 RNF123Q5XPI4 1314 aa29.18■■■□□ 2.26
NPAS1-202ENST00000449844 C3P01024 1663 aa29.16■■■□□ 2.26
NPAS1-202ENST00000449844 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
NPAS1-202ENST00000449844 UBR1Q8IWV7 1749 aa29.16■■■□□ 2.26
NPAS1-202ENST00000449844 AMER1Q5JTC6 1135 aaPredicted RBP29.13■■■□□ 2.25
NPAS1-202ENST00000449844 BLMP54132 1417 aaPredicted RBP29.13■■■□□ 2.25
NPAS1-202ENST00000449844 YTHDC2Q9H6S0 1430 aaKnown RBP29.13■■■□□ 2.25
NPAS1-202ENST00000449844 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.12■■■□□ 2.25
NPAS1-202ENST00000449844 SETD1AO15047 1707 aaKnown RBP29.11■■■□□ 2.25
NPAS1-202ENST00000449844 PDE3BQ13370 1112 aa29.11■■■□□ 2.25
NPAS1-202ENST00000449844 STK26Q9P289 416 aa29.11■■■□□ 2.25
NPAS1-202ENST00000449844 NLRP1Q9C000 1473 aa29.09■■■□□ 2.25
NPAS1-202ENST00000449844 PTPRMP28827 1452 aa29.09■■■□□ 2.25
NPAS1-202ENST00000449844 TULP4Q9NRJ4 1543 aa29.08■■■□□ 2.25
NPAS1-202ENST00000449844 NRXN3Q9Y4C0 1643 aa29.07■■■□□ 2.24
NPAS1-202ENST00000449844 CEBPAP49715 358 aaPredicted RBP29.07■■■□□ 2.24
NPAS1-202ENST00000449844 EVC2Q86UK5 1308 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms