RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 PHF8Q9UPP1 1060 aa12.88□□□□□ -0.35
NPHP1-208ENST00000449600 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
NPHP1-208ENST00000449600 CAMSAP1Q5T5Y3 1602 aa12.87□□□□□ -0.35
NPHP1-208ENST00000449600 CTTNBP2Q8WZ74 1663 aa12.86□□□□□ -0.35
NPHP1-208ENST00000449600 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
NPHP1-208ENST00000449600 TOM1O60784 492 aa12.86□□□□□ -0.35
NPHP1-208ENST00000449600 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
NPHP1-208ENST00000449600 C3P01024 1663 aa12.86□□□□□ -0.35
NPHP1-208ENST00000449600 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
NPHP1-208ENST00000449600 PKD2Q13563 968 aa12.85□□□□□ -0.35
NPHP1-208ENST00000449600 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
NPHP1-208ENST00000449600 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
NPHP1-208ENST00000449600 NPATQ14207 1427 aa12.83□□□□□ -0.36
NPHP1-208ENST00000449600 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
NPHP1-208ENST00000449600 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
NPHP1-208ENST00000449600 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
NPHP1-208ENST00000449600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.36
NPHP1-208ENST00000449600 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
NPHP1-208ENST00000449600 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
NPHP1-208ENST00000449600 AGLP35573 1532 aa12.81□□□□□ -0.36
NPHP1-208ENST00000449600 NUP153P49790 1475 aaKnown RBP12.8□□□□□ -0.36
NPHP1-208ENST00000449600 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
NPHP1-208ENST00000449600 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
NPHP1-208ENST00000449600 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
NPHP1-208ENST00000449600 CPS1P31327 1500 aa12.79□□□□□ -0.36
NPHP1-208ENST00000449600 RNF166Q96A37 237 aaPredicted RBP12.79□□□□□ -0.36
NPHP1-208ENST00000449600 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
NPHP1-208ENST00000449600 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
NPHP1-208ENST00000449600 PLCH2O75038 1416 aa12.78□□□□□ -0.36
NPHP1-208ENST00000449600 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
NPHP1-208ENST00000449600 ALKQ9UM73 1620 aa12.77□□□□□ -0.36
NPHP1-208ENST00000449600 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
NPHP1-208ENST00000449600 KDM5CP41229 1560 aa12.75□□□□□ -0.37
NPHP1-208ENST00000449600 ZNF518AQ6AHZ1 1483 aa12.75□□□□□ -0.37
NPHP1-208ENST00000449600 ARSIQ5FYB1 569 aa12.74□□□□□ -0.37
NPHP1-208ENST00000449600 ESF1Q9H501 851 aaKnown RBP12.74□□□□□ -0.37
NPHP1-208ENST00000449600 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
NPHP1-208ENST00000449600 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
NPHP1-208ENST00000449600 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
NPHP1-208ENST00000449600 ZNF142P52746 1687 aaPredicted RBP12.73□□□□□ -0.37
NPHP1-208ENST00000449600 CLIP1P30622 1438 aa12.72□□□□□ -0.37
NPHP1-208ENST00000449600 NLRP6P59044 892 aa12.72□□□□□ -0.37
NPHP1-208ENST00000449600 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
NPHP1-208ENST00000449600 SAMD9Q5K651 1589 aa12.72□□□□□ -0.37
NPHP1-208ENST00000449600 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
NPHP1-208ENST00000449600 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
NPHP1-208ENST00000449600 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
NPHP1-208ENST00000449600 KHSRPQ92945 711 aaKnown RBP eCLIP12.7□□□□□ -0.38
NPHP1-208ENST00000449600 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
NPHP1-208ENST00000449600 MLH3Q9UHC1 1453 aa12.7□□□□□ -0.38
NPHP1-208ENST00000449600 MROH2AA6NES4 1674 aa12.7□□□□□ -0.38
NPHP1-208ENST00000449600 KIF3CO14782 793 aa12.69□□□□□ -0.38
NPHP1-208ENST00000449600 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
NPHP1-208ENST00000449600 CEP170BQ9Y4F5 1589 aaPredicted RBP12.69□□□□□ -0.38
NPHP1-208ENST00000449600 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
NPHP1-208ENST00000449600 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
NPHP1-208ENST00000449600 MYO3AQ8NEV4 1616 aa12.67□□□□□ -0.38
NPHP1-208ENST00000449600 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
NPHP1-208ENST00000449600 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
NPHP1-208ENST00000449600 PTGER2P43116 358 aa12.65□□□□□ -0.38
NPHP1-208ENST00000449600 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
NPHP1-208ENST00000449600 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
NPHP1-208ENST00000449600 NEURL4Q96JN8 1562 aa12.62□□□□□ -0.39
NPHP1-208ENST00000449600 UPF1Q92900 1129 aaKnown RBP eCLIP12.62□□□□□ -0.39
NPHP1-208ENST00000449600 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
NPHP1-208ENST00000449600 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
NPHP1-208ENST00000449600 A2ML1A8K2U0 1454 aa12.6□□□□□ -0.39
NPHP1-208ENST00000449600 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
NPHP1-208ENST00000449600 SETD1AO15047 1707 aaKnown RBP12.59□□□□□ -0.39
NPHP1-208ENST00000449600 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
NPHP1-208ENST00000449600 LSM11P83369 360 aaKnown RBP eCLIP12.58□□□□□ -0.4
NPHP1-208ENST00000449600 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
NPHP1-208ENST00000449600 MYO5CQ9NQX4 1742 aa12.58□□□□□ -0.4
NPHP1-208ENST00000449600 RNF17Q9BXT8 1623 aaKnown RBP12.58□□□□□ -0.4
NPHP1-208ENST00000449600 VPS8Q8N3P4 1428 aa12.57□□□□□ -0.4
NPHP1-208ENST00000449600 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
NPHP1-208ENST00000449600 STK25O00506 426 aa12.56□□□□□ -0.4
NPHP1-208ENST00000449600 NUDT7P0C024 238 aa12.56□□□□□ -0.4
NPHP1-208ENST00000449600 POTEEQ6S8J3 1075 aa12.56□□□□□ -0.4
NPHP1-208ENST00000449600 MED14O60244 1454 aa12.56□□□□□ -0.4
NPHP1-208ENST00000449600 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
NPHP1-208ENST00000449600 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
NPHP1-208ENST00000449600 SLC34A2O95436 690 aa12.54□□□□□ -0.4
NPHP1-208ENST00000449600 ARHGAP5Q13017 1502 aa12.53□□□□□ -0.4
NPHP1-208ENST00000449600 SYNMO15061 1565 aa12.53□□□□□ -0.4
NPHP1-208ENST00000449600 KIDINS220Q9ULH0 1771 aa12.53□□□□□ -0.4
NPHP1-208ENST00000449600 FAM135BQ49AJ0 1406 aa12.53□□□□□ -0.4
NPHP1-208ENST00000449600 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.4
NPHP1-208ENST00000449600 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
NPHP1-208ENST00000449600 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
NPHP1-208ENST00000449600 PBX2P40425 430 aa12.51□□□□□ -0.41
NPHP1-208ENST00000449600 ANKLE2Q86XL3 938 aa12.51□□□□□ -0.41
NPHP1-208ENST00000449600 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
NPHP1-208ENST00000449600 ABCC1P33527 1531 aa12.51□□□□□ -0.41
NPHP1-208ENST00000449600 DEPDC5O75140 1603 aa12.51□□□□□ -0.41
NPHP1-208ENST00000449600 CLTCQ00610 1675 aaKnown RBP12.51□□□□□ -0.41
NPHP1-208ENST00000449600 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
NPHP1-208ENST00000449600 NPHP4O75161 1426 aaPredicted RBP12.5□□□□□ -0.41
NPHP1-208ENST00000449600 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
NPHP1-208ENST00000449600 PLXNC1O60486 1568 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms