RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TMEM132EQ6IEE7 984 aa15.44■□□□□ 0.06
UBE3B-204ENST00000449510 SLC12A5Q9H2X9 1139 aa15.44■□□□□ 0.06
UBE3B-204ENST00000449510 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-204ENST00000449510 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
UBE3B-204ENST00000449510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
UBE3B-204ENST00000449510 PCDHB15Q9Y5E8 787 aa15.43■□□□□ 0.06
UBE3B-204ENST00000449510 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
UBE3B-204ENST00000449510 RPRD2Q5VT52 1461 aaKnown RBP15.42■□□□□ 0.06
UBE3B-204ENST00000449510 PDE3AQ14432 1141 aa15.41■□□□□ 0.06
UBE3B-204ENST00000449510 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
UBE3B-204ENST00000449510 GAPVD1Q14C86 1478 aa15.41■□□□□ 0.06
UBE3B-204ENST00000449510 DAPK1P53355 1430 aa15.4■□□□□ 0.06
UBE3B-204ENST00000449510 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
UBE3B-204ENST00000449510 CHMP3Q9Y3E7 222 aa15.4■□□□□ 0.06
UBE3B-204ENST00000449510 PRPF40AO75400 957 aaKnown RBP15.39■□□□□ 0.05
UBE3B-204ENST00000449510 RUNDC1Q96C34 613 aa15.39■□□□□ 0.05
UBE3B-204ENST00000449510 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
UBE3B-204ENST00000449510 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
UBE3B-204ENST00000449510 MIA2Q96PC5 1412 aa15.39■□□□□ 0.05
UBE3B-204ENST00000449510 NESP48681 1621 aa15.39■□□□□ 0.05
UBE3B-204ENST00000449510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-204ENST00000449510 RIPK4P57078 832 aa15.39■□□□□ 0.05
UBE3B-204ENST00000449510 KIAA2012Q0VF49 1180 aa15.38■□□□□ 0.05
UBE3B-204ENST00000449510 TRIM6-TRIM34B2RNG4 842 aa15.38■□□□□ 0.05
UBE3B-204ENST00000449510 DRC7Q8IY82 874 aa15.38■□□□□ 0.05
UBE3B-204ENST00000449510 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
UBE3B-204ENST00000449510 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
UBE3B-204ENST00000449510 DDX19BQ9UMR2 479 aa15.37■□□□□ 0.05
UBE3B-204ENST00000449510 PLEKHH1Q9ULM0 1364 aa15.37■□□□□ 0.05
UBE3B-204ENST00000449510 DISP3Q9P2K9 1392 aa15.37■□□□□ 0.05
UBE3B-204ENST00000449510 NOB1Q9ULX3 412 aaKnown RBP15.37■□□□□ 0.05
UBE3B-204ENST00000449510 ABCC5O15440 1437 aa15.37■□□□□ 0.05
UBE3B-204ENST00000449510 RLBP1P12271 317 aa15.37■□□□□ 0.05
UBE3B-204ENST00000449510 HMOX1P09601 288 aa15.36■□□□□ 0.05
UBE3B-204ENST00000449510 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-204ENST00000449510 SKOR2Q2VWA4 1001 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-204ENST00000449510 RRP9O43818 475 aaKnown RBP15.35■□□□□ 0.05
UBE3B-204ENST00000449510 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
UBE3B-204ENST00000449510 RARSP54136 660 aaKnown RBP15.35■□□□□ 0.05
UBE3B-204ENST00000449510 TNPO1Q92973 898 aaKnown RBP15.35■□□□□ 0.05
UBE3B-204ENST00000449510 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
UBE3B-204ENST00000449510 PER1O15534 1290 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-204ENST00000449510 NUTM2FA1L443 756 aa15.34■□□□□ 0.05
UBE3B-204ENST00000449510 SSFA2P28290 1259 aa15.34■□□□□ 0.05
UBE3B-204ENST00000449510 RILPL2Q969X0 211 aa15.34■□□□□ 0.05
UBE3B-204ENST00000449510 TBC1D32Q96NH3 1257 aa15.34■□□□□ 0.05
UBE3B-204ENST00000449510 MVPQ14764 893 aaKnown RBP15.32■□□□□ 0.04
UBE3B-204ENST00000449510 KCNJ4P48050 445 aa15.32■□□□□ 0.04
UBE3B-204ENST00000449510 CHAF1AQ13111 956 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-204ENST00000449510 CABP2Q9NPB3 220 aa15.32■□□□□ 0.04
UBE3B-204ENST00000449510 ST18O60284 1047 aa15.31■□□□□ 0.04
UBE3B-204ENST00000449510 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-204ENST00000449510 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
UBE3B-204ENST00000449510 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
UBE3B-204ENST00000449510 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
UBE3B-204ENST00000449510 TMEM57Q8N5G2 664 aa15.31■□□□□ 0.04
UBE3B-204ENST00000449510 ERBINQ96RT1 1412 aa15.31■□□□□ 0.04
UBE3B-204ENST00000449510 KDM2BQ8NHM5 1336 aa15.3■□□□□ 0.04
UBE3B-204ENST00000449510 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-204ENST00000449510 AFAP1Q8N556 730 aa15.3■□□□□ 0.04
UBE3B-204ENST00000449510 NAP1L2Q9ULW6 460 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-204ENST00000449510 GOLGA6L4A6NEF3 574 aa15.29■□□□□ 0.04
UBE3B-204ENST00000449510 CLCN1P35523 988 aa15.29■□□□□ 0.04
UBE3B-204ENST00000449510 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-204ENST00000449510 LRPPRCP42704 1394 aaKnown RBP15.29■□□□□ 0.04
UBE3B-204ENST00000449510 OS9Q13438 667 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-204ENST00000449510 EFCAB2Q5VUJ9 269 aa15.28■□□□□ 0.04
UBE3B-204ENST00000449510 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
UBE3B-204ENST00000449510 UQCRHLA0A096LP55 91 aa15.28■□□□□ 0.04
UBE3B-204ENST00000449510 UQCRHP07919 91 aa15.28■□□□□ 0.04
UBE3B-204ENST00000449510 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
UBE3B-204ENST00000449510 ZHX1Q9UKY1 873 aaPredicted RBP15.28■□□□□ 0.04
UBE3B-204ENST00000449510 EPRSP07814 1512 aaKnown RBP15.28■□□□□ 0.04
UBE3B-204ENST00000449510 SPAG9O60271 1321 aaKnown RBP15.28■□□□□ 0.04
UBE3B-204ENST00000449510 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.04
UBE3B-204ENST00000449510 CHMP4BQ9H444 224 aaKnown RBP15.27■□□□□ 0.04
UBE3B-204ENST00000449510 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
UBE3B-204ENST00000449510 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-204ENST00000449510 EHBP1L1Q8N3D4 1523 aa15.27■□□□□ 0.03
UBE3B-204ENST00000449510 PEG3Q9GZU2 1588 aa15.27■□□□□ 0.03
UBE3B-204ENST00000449510 PTMSP20962 102 aa15.27■□□□□ 0.03
UBE3B-204ENST00000449510 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
UBE3B-204ENST00000449510 RBM27Q9P2N5 1060 aaKnown RBP15.26■□□□□ 0.03
UBE3B-204ENST00000449510 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
UBE3B-204ENST00000449510 SYCE3A1L190 88 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 NEK4P51957 841 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
UBE3B-204ENST00000449510 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-204ENST00000449510 ZSCAN30Q86W11 494 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 TESK2Q96S53 571 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 TPM2P07951 284 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 MCCP23508 829 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 ZNF592Q92610 1267 aa15.25■□□□□ 0.03
UBE3B-204ENST00000449510 SUPT6HQ7KZ85 1726 aaKnown RBP15.24■□□□□ 0.03
UBE3B-204ENST00000449510 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
UBE3B-204ENST00000449510 CARMIL2Q6F5E8 1435 aa15.24■□□□□ 0.03
UBE3B-204ENST00000449510 PARD3Q8TEW0 1356 aa15.24■□□□□ 0.03
UBE3B-204ENST00000449510 TRIM27P14373 513 aa15.24■□□□□ 0.03
UBE3B-204ENST00000449510 FBLN1P23142 703 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms