RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-208ENST00000449395 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-208ENST00000449395 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-208ENST00000449395 KIAA2012Q0VF49 1180 aa13.1□□□□□ -0.31
PRDM15-208ENST00000449395 GPR162Q16538 588 aa13.1□□□□□ -0.31
PRDM15-208ENST00000449395 COG3Q96JB2 828 aa13.1□□□□□ -0.31
PRDM15-208ENST00000449395 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
PRDM15-208ENST00000449395 MYCNP04198 464 aaPredicted RBP13.09□□□□□ -0.31
PRDM15-208ENST00000449395 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
PRDM15-208ENST00000449395 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
PRDM15-208ENST00000449395 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
PRDM15-208ENST00000449395 RAPGEF2Q9Y4G8 1499 aa13.08□□□□□ -0.32
PRDM15-208ENST00000449395 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
PRDM15-208ENST00000449395 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
PRDM15-208ENST00000449395 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
PRDM15-208ENST00000449395 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
PRDM15-208ENST00000449395 TEFQ10587 303 aa13.07□□□□□ -0.32
PRDM15-208ENST00000449395 SNAPC4Q5SXM2 1469 aa13.07□□□□□ -0.32
PRDM15-208ENST00000449395 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
PRDM15-208ENST00000449395 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
PRDM15-208ENST00000449395 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
PRDM15-208ENST00000449395 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
PRDM15-208ENST00000449395 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
PRDM15-208ENST00000449395 NLRP6P59044 892 aa13.06□□□□□ -0.32
PRDM15-208ENST00000449395 WIZO95785 1651 aa13.06□□□□□ -0.32
PRDM15-208ENST00000449395 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
PRDM15-208ENST00000449395 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
PRDM15-208ENST00000449395 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
PRDM15-208ENST00000449395 ARHGAP5Q13017 1502 aa13.04□□□□□ -0.32
PRDM15-208ENST00000449395 TPM4P67936 248 aa13.04□□□□□ -0.32
PRDM15-208ENST00000449395 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
PRDM15-208ENST00000449395 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
PRDM15-208ENST00000449395 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
PRDM15-208ENST00000449395 SLC4A3P48751 1232 aa13.03□□□□□ -0.32
PRDM15-208ENST00000449395 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
PRDM15-208ENST00000449395 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.32
PRDM15-208ENST00000449395 PANK3Q9H999 370 aa13.02□□□□□ -0.32
PRDM15-208ENST00000449395 ST20-MTHFSA0A0A6YYL1 179 aa13.02□□□□□ -0.33
PRDM15-208ENST00000449395 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.33
PRDM15-208ENST00000449395 RRP7AQ9Y3A4 280 aaKnown RBP13.02□□□□□ -0.33
PRDM15-208ENST00000449395 PHF14O94880 888 aa13.02□□□□□ -0.33
PRDM15-208ENST00000449395 RBM5P52756 815 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRDM15-208ENST00000449395 NCKAP5LQ9HCH0 1330 aa13.01□□□□□ -0.33
PRDM15-208ENST00000449395 CD109Q6YHK3 1445 aa13.01□□□□□ -0.33
PRDM15-208ENST00000449395 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
PRDM15-208ENST00000449395 TOMM22Q9NS69 142 aa13.01□□□□□ -0.33
PRDM15-208ENST00000449395 CCDC144AA2RUR9 1427 aa13□□□□□ -0.33
PRDM15-208ENST00000449395 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
PRDM15-208ENST00000449395 CCDC34Q96HJ3 373 aa13□□□□□ -0.33
PRDM15-208ENST00000449395 ST18O60284 1047 aa13□□□□□ -0.33
PRDM15-208ENST00000449395 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
PRDM15-208ENST00000449395 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
PRDM15-208ENST00000449395 MSH6P52701 1360 aa12.98□□□□□ -0.33
PRDM15-208ENST00000449395 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
PRDM15-208ENST00000449395 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
PRDM15-208ENST00000449395 DHX57Q6P158 1386 aaKnown RBP12.97□□□□□ -0.33
PRDM15-208ENST00000449395 ARID3AQ99856 593 aa12.97□□□□□ -0.33
PRDM15-208ENST00000449395 NOC3LQ8WTT2 800 aaKnown RBP12.97□□□□□ -0.33
PRDM15-208ENST00000449395 IBSPP21815 317 aaPredicted RBP12.97□□□□□ -0.33
PRDM15-208ENST00000449395 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.33
PRDM15-208ENST00000449395 UACAQ9BZF9 1416 aa12.96□□□□□ -0.33
PRDM15-208ENST00000449395 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.33
PRDM15-208ENST00000449395 BAG6P46379 1132 aa12.96□□□□□ -0.34
PRDM15-208ENST00000449395 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.34
PRDM15-208ENST00000449395 RASSF8Q8NHQ8 419 aa12.96□□□□□ -0.34
PRDM15-208ENST00000449395 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
PRDM15-208ENST00000449395 PLIN1O60240 522 aa12.95□□□□□ -0.34
PRDM15-208ENST00000449395 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
PRDM15-208ENST00000449395 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
PRDM15-208ENST00000449395 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
PRDM15-208ENST00000449395 E9PSI1 815 aa12.95□□□□□ -0.34
PRDM15-208ENST00000449395 ANKRD45Q5TZF3 282 aa12.95□□□□□ -0.34
PRDM15-208ENST00000449395 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 SMARCA4P51532 1647 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 NECTIN2Q92692 538 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 AK7Q96M32 723 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
PRDM15-208ENST00000449395 PRKRIP1Q9H875 184 aaPredicted RBP12.94□□□□□ -0.34
PRDM15-208ENST00000449395 FAM161AQ3B820 660 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 ZKSCAN2Q63HK3 967 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 KIF3AQ9Y496 699 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
PRDM15-208ENST00000449395 DDX11L8A8MPP1 907 aa12.93□□□□□ -0.34
PRDM15-208ENST00000449395 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
PRDM15-208ENST00000449395 RRP1P56182 461 aaKnown RBP12.93□□□□□ -0.34
PRDM15-208ENST00000449395 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
PRDM15-208ENST00000449395 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
PRDM15-208ENST00000449395 USP47Q96K76 1375 aa12.93□□□□□ -0.34
PRDM15-208ENST00000449395 ZPR1O75312 459 aa12.93□□□□□ -0.34
PRDM15-208ENST00000449395 PDE4AP27815 886 aa12.93□□□□□ -0.34
PRDM15-208ENST00000449395 SF3A1Q15459 793 aaKnown RBP12.93□□□□□ -0.34
PRDM15-208ENST00000449395 CRBNQ96SW2 442 aa12.93□□□□□ -0.34
PRDM15-208ENST00000449395 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
PRDM15-208ENST00000449395 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
PRDM15-208ENST00000449395 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
PRDM15-208ENST00000449395 MARCH6O60337 910 aa12.92□□□□□ -0.34
PRDM15-208ENST00000449395 ZNF622Q969S3 477 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRDM15-208ENST00000449395 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
PRDM15-208ENST00000449395 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
PRDM15-208ENST00000449395 CAPN15O75808 1086 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms