RNA–Protein interactions for RNA: ENST00000449202.5

CLIP4-207, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-207ENST00000449202 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
CLIP4-207ENST00000449202 METTL3Q86U44 580 aaKnown RBP8.62□□□□□ -1.03
CLIP4-207ENST00000449202 PRR14Q9BWN1 585 aa8.58□□□□□ -1.04
CLIP4-207ENST00000449202 APLP1P51693 650 aa8.57□□□□□ -1.04
CLIP4-207ENST00000449202 KCNC4Q03721 635 aa8.57□□□□□ -1.04
CLIP4-207ENST00000449202 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
CLIP4-207ENST00000449202 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
CLIP4-207ENST00000449202 TJAP1Q5JTD0 557 aa8.55□□□□□ -1.04
CLIP4-207ENST00000449202 A0A0G2JS52 829 aa8.54□□□□□ -1.04
CLIP4-207ENST00000449202 MTRQ99707 1265 aa8.54□□□□□ -1.04
CLIP4-207ENST00000449202 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
CLIP4-207ENST00000449202 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
CLIP4-207ENST00000449202 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
CLIP4-207ENST00000449202 IRF6O14896 467 aa8.52□□□□□ -1.05
CLIP4-207ENST00000449202 RSPH4AQ5TD94 716 aa8.52□□□□□ -1.05
CLIP4-207ENST00000449202 DAXXQ9UER7 740 aaPredicted RBP8.52□□□□□ -1.05
CLIP4-207ENST00000449202 NISCHQ9Y2I1 1504 aa8.51□□□□□ -1.05
CLIP4-207ENST00000449202 RGS20O76081 388 aa8.51□□□□□ -1.05
CLIP4-207ENST00000449202 CFHP08603 1231 aa8.51□□□□□ -1.05
CLIP4-207ENST00000449202 SLC10A3P09131 477 aa8.51□□□□□ -1.05
CLIP4-207ENST00000449202 KMT5BQ4FZB7 885 aa8.51□□□□□ -1.05
CLIP4-207ENST00000449202 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
CLIP4-207ENST00000449202 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
CLIP4-207ENST00000449202 NLRP7Q8WX94 980 aa8.49□□□□□ -1.05
CLIP4-207ENST00000449202 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
CLIP4-207ENST00000449202 CCDC102AQ96A19 550 aa8.48□□□□□ -1.05
CLIP4-207ENST00000449202 ZMYND10O75800 440 aa8.47□□□□□ -1.05
CLIP4-207ENST00000449202 COPS2P61201 443 aa8.47□□□□□ -1.05
CLIP4-207ENST00000449202 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
CLIP4-207ENST00000449202 ZC3H15Q8WU90 426 aaKnown RBP8.47□□□□□ -1.05
CLIP4-207ENST00000449202 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.06
CLIP4-207ENST00000449202 RDH13Q8NBN7 331 aa8.46□□□□□ -1.06
CLIP4-207ENST00000449202 ZNF516Q92618 1163 aa8.46□□□□□ -1.06
CLIP4-207ENST00000449202 ZPR1O75312 459 aa8.45□□□□□ -1.06
CLIP4-207ENST00000449202 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
CLIP4-207ENST00000449202 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
CLIP4-207ENST00000449202 NR1I2O75469 434 aa8.42□□□□□ -1.06
CLIP4-207ENST00000449202 CLCN1P35523 988 aa8.42□□□□□ -1.06
CLIP4-207ENST00000449202 GCGRP47871 477 aa8.42□□□□□ -1.06
CLIP4-207ENST00000449202 MDM2Q00987 491 aaPredicted RBP8.42□□□□□ -1.06
CLIP4-207ENST00000449202 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
CLIP4-207ENST00000449202 CD46P15529 392 aa8.4□□□□□ -1.06
CLIP4-207ENST00000449202 BCANQ96GW7 911 aa8.4□□□□□ -1.06
CLIP4-207ENST00000449202 GPCPD1Q9NPB8 672 aa8.4□□□□□ -1.06
CLIP4-207ENST00000449202 GGCXP38435 758 aa8.39□□□□□ -1.07
CLIP4-207ENST00000449202 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
CLIP4-207ENST00000449202 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
CLIP4-207ENST00000449202 ATP6V1AP38606 617 aa8.38□□□□□ -1.07
CLIP4-207ENST00000449202 FUT2Q10981 343 aa8.38□□□□□ -1.07
CLIP4-207ENST00000449202 SCUBE3Q8IX30 993 aa8.38□□□□□ -1.07
CLIP4-207ENST00000449202 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.38□□□□□ -1.07
CLIP4-207ENST00000449202 AMHR2Q16671 573 aa8.37□□□□□ -1.07
CLIP4-207ENST00000449202 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
CLIP4-207ENST00000449202 MORN1Q5T089 497 aa8.37□□□□□ -1.07
CLIP4-207ENST00000449202 FAM217BQ9NTX9 383 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-207ENST00000449202 TLL1O43897 1013 aa8.36□□□□□ -1.07
CLIP4-207ENST00000449202 ADH1BP00325 375 aa8.36□□□□□ -1.07
CLIP4-207ENST00000449202 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
CLIP4-207ENST00000449202 KDM4AO75164 1064 aa8.34□□□□□ -1.07
CLIP4-207ENST00000449202 USP46P62068 366 aa8.34□□□□□ -1.07
CLIP4-207ENST00000449202 AK7Q96M32 723 aa8.34□□□□□ -1.07
CLIP4-207ENST00000449202 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
CLIP4-207ENST00000449202 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
CLIP4-207ENST00000449202 SALL2Q9Y467 1007 aaPredicted RBP8.33□□□□□ -1.08
CLIP4-207ENST00000449202 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
CLIP4-207ENST00000449202 SPSB2Q99619 263 aa8.32□□□□□ -1.08
CLIP4-207ENST00000449202 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
CLIP4-207ENST00000449202 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
CLIP4-207ENST00000449202 TRIM66O15016 1216 aa8.31□□□□□ -1.08
CLIP4-207ENST00000449202 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-207ENST00000449202 S1PR4O95977 384 aa8.31□□□□□ -1.08
CLIP4-207ENST00000449202 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
CLIP4-207ENST00000449202 SLC6A16Q9GZN6 736 aa8.31□□□□□ -1.08
CLIP4-207ENST00000449202 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-207ENST00000449202 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
CLIP4-207ENST00000449202 Q3C1V9 767 aa8.3□□□□□ -1.08
CLIP4-207ENST00000449202 BRICD5Q6PL45 260 aa8.29□□□□□ -1.08
CLIP4-207ENST00000449202 GIGYF2Q6Y7W6 1299 aaKnown RBP8.29□□□□□ -1.08
CLIP4-207ENST00000449202 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
CLIP4-207ENST00000449202 HOXA2O43364 376 aa8.28□□□□□ -1.08
CLIP4-207ENST00000449202 NUTM1Q86Y26 1132 aa8.28□□□□□ -1.08
CLIP4-207ENST00000449202 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
CLIP4-207ENST00000449202 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-207ENST00000449202 SLC24A3Q9HC58 644 aa8.27□□□□□ -1.09
CLIP4-207ENST00000449202 MSS51Q4VC12 460 aa8.26□□□□□ -1.09
CLIP4-207ENST00000449202 RNF19BQ6ZMZ0 732 aa8.26□□□□□ -1.09
CLIP4-207ENST00000449202 FAM160A2Q8N612 972 aaPredicted RBP8.26□□□□□ -1.09
CLIP4-207ENST00000449202 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
CLIP4-207ENST00000449202 SLC19A1P41440 591 aa8.24□□□□□ -1.09
CLIP4-207ENST00000449202 HLA-CQ95604 372 aa8.24□□□□□ -1.09
CLIP4-207ENST00000449202 PDE4DQ08499 809 aa8.23□□□□□ -1.09
CLIP4-207ENST00000449202 SPIRE2Q8WWL2 714 aa8.23□□□□□ -1.09
CLIP4-207ENST00000449202 EMID1Q96A84 441 aaPredicted RBP8.23□□□□□ -1.09
CLIP4-207ENST00000449202 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
CLIP4-207ENST00000449202 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
CLIP4-207ENST00000449202 MS4A1P11836 297 aa8.21□□□□□ -1.1
CLIP4-207ENST00000449202 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
CLIP4-207ENST00000449202 DIXDC1Q155Q3 683 aa8.21□□□□□ -1.1
CLIP4-207ENST00000449202 PRDM9Q9NQV7 894 aa8.21□□□□□ -1.1
CLIP4-207ENST00000449202 FDX1P10109 184 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms