RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 MROH1Q8NDA8 1641 aa5.62□□□□□ -1.51
LMBR1-212ENST00000448926 NPATQ14207 1427 aa5.62□□□□□ -1.51
LMBR1-212ENST00000448926 RRP7AQ9Y3A4 280 aaKnown RBP5.62□□□□□ -1.51
LMBR1-212ENST00000448926 MSH5O43196 834 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 CARD14Q9BXL6 1004 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 COL17A1Q9UMD9 1497 aaPredicted RBP5.61□□□□□ -1.51
LMBR1-212ENST00000448926 POGZQ7Z3K3 1410 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 MADDQ8WXG6 1647 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 NUTM2FA1L443 756 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 RTN4Q9NQC3 1192 aaKnown RBP5.61□□□□□ -1.51
LMBR1-212ENST00000448926 STAG3Q9UJ98 1225 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 MINK1Q8N4C8 1332 aaPredicted RBP5.61□□□□□ -1.51
LMBR1-212ENST00000448926 ABCA6Q8N139 1617 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 NLRP13Q86W25 1043 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 ZNF518AQ6AHZ1 1483 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 FRMPD1Q5SYB0 1578 aa5.61□□□□□ -1.51
LMBR1-212ENST00000448926 NUDCQ9Y266 331 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 TRPM2O94759 1503 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 RTEL1-TNFRSF6BF6WH68 1400 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 PPP2R1AP30153 589 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 ARID4BQ4LE39 1312 aaPredicted RBP5.6□□□□□ -1.51
LMBR1-212ENST00000448926 GPRASP1Q5JY77 1395 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 RALBP1Q15311 655 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 EXOC6Q8TAG9 804 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 RBM19Q9Y4C8 960 aaKnown RBP5.6□□□□□ -1.51
LMBR1-212ENST00000448926 DMRT2Q9Y5R5 561 aa5.6□□□□□ -1.51
LMBR1-212ENST00000448926 TET3O43151 1660 aa5.59□□□□□ -1.51
LMBR1-212ENST00000448926 PTPRTO14522 1441 aa5.59□□□□□ -1.51
LMBR1-212ENST00000448926 AMER1Q5JTC6 1135 aaPredicted RBP5.59□□□□□ -1.51
LMBR1-212ENST00000448926 C20orf194Q5TEA3 1177 aa5.59□□□□□ -1.51
LMBR1-212ENST00000448926 NCKAP5LQ9HCH0 1330 aa5.59□□□□□ -1.51
LMBR1-212ENST00000448926 PARD3Q8TEW0 1356 aa5.59□□□□□ -1.52
LMBR1-212ENST00000448926 PLEKHG5O94827 1062 aa5.59□□□□□ -1.52
LMBR1-212ENST00000448926 CEBPAP49715 358 aaPredicted RBP5.59□□□□□ -1.52
LMBR1-212ENST00000448926 SPINK5Q9NQ38 1064 aaPredicted RBP5.59□□□□□ -1.52
LMBR1-212ENST00000448926 SIGLEC1Q9BZZ2 1709 aa5.58□□□□□ -1.52
LMBR1-212ENST00000448926 WAPLQ7Z5K2 1190 aa5.58□□□□□ -1.52
LMBR1-212ENST00000448926 EFCAB6Q5THR3 1501 aa5.58□□□□□ -1.52
LMBR1-212ENST00000448926 RIMBP3CA6NJZ7 1639 aa5.58□□□□□ -1.52
LMBR1-212ENST00000448926 RIMBP3BA6NNM3 1639 aa5.58□□□□□ -1.52
LMBR1-212ENST00000448926 RNF17Q9BXT8 1623 aaKnown RBP5.58□□□□□ -1.52
LMBR1-212ENST00000448926 RIMBP3Q9UFD9 1639 aa5.58□□□□□ -1.52
LMBR1-212ENST00000448926 SCAF11Q99590 1463 aaKnown RBP5.58□□□□□ -1.52
LMBR1-212ENST00000448926 APAF1O14727 1248 aa5.58□□□□□ -1.52
LMBR1-212ENST00000448926 SRPK2P78362 688 aaKnown RBP5.58□□□□□ -1.52
LMBR1-212ENST00000448926 WDR43Q15061 677 aaKnown RBP eCLIP5.58□□□□□ -1.52
LMBR1-212ENST00000448926 PELP1Q8IZL8 1130 aaKnown RBP5.58□□□□□ -1.52
LMBR1-212ENST00000448926 CENPJQ9HC77 1338 aaPredicted RBP5.58□□□□□ -1.52
LMBR1-212ENST00000448926 CCDC136Q96JN2 1154 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 DEPDC5O75140 1603 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 HECW2Q9P2P5 1572 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 PPM1GO15355 546 aaPredicted RBP5.57□□□□□ -1.52
LMBR1-212ENST00000448926 GGNBP2Q9H3C7 697 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 KIF1BO60333 1816 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 BRD4O60885 1362 aaPredicted RBP5.57□□□□□ -1.52
LMBR1-212ENST00000448926 MYO5BQ9ULV0 1848 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 PPP4R2Q9NY27 417 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 PLEKHH1Q9ULM0 1364 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 ERVK-7P63135 1459 aa5.57□□□□□ -1.52
LMBR1-212ENST00000448926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.56□□□□□ -1.522e-6■■■□□ 17.5
LMBR1-212ENST00000448926 PRAM1Q96QH2 718 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 SOX12O15370 315 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 ABCC3O15438 1527 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 LRPPRCP42704 1394 aaKnown RBP5.56□□□□□ -1.52
LMBR1-212ENST00000448926 RCAN3Q9UKA8 241 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 EIF2AK4Q9P2K8 1649 aaKnown RBP5.56□□□□□ -1.52
LMBR1-212ENST00000448926 VWDEQ8N2E2 1590 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 DIP2CQ9Y2E4 1556 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 NSD3Q9BZ95 1437 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 BCL2L13Q9BXK5 485 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 POGKQ9P215 609 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 IQGAP1P46940 1657 aa5.56□□□□□ -1.52
LMBR1-212ENST00000448926 ARAP3Q8WWN8 1544 aa5.55□□□□□ -1.52
LMBR1-212ENST00000448926 MORC1Q86VD1 984 aa5.55□□□□□ -1.52
LMBR1-212ENST00000448926 RBM33Q96EV2 1170 aaKnown RBP5.55□□□□□ -1.52
LMBR1-212ENST00000448926 MAP3K4Q9Y6R4 1608 aa5.55□□□□□ -1.52
LMBR1-212ENST00000448926 TRHP20396 242 aaPredicted RBP5.55□□□□□ -1.52
LMBR1-212ENST00000448926 NPM2Q86SE8 214 aaKnown RBP5.55□□□□□ -1.52
LMBR1-212ENST00000448926 C14orf93Q9H972 538 aaKnown RBP5.55□□□□□ -1.52
LMBR1-212ENST00000448926 ZRANB1Q9UGI0 708 aa5.55□□□□□ -1.52
LMBR1-212ENST00000448926 SMG6Q86US8 1419 aaKnown RBP5.55□□□□□ -1.52
LMBR1-212ENST00000448926 CRBNQ96SW2 442 aa5.55□□□□□ -1.52
LMBR1-212ENST00000448926 SYNMO15061 1565 aa5.55□□□□□ -1.52
LMBR1-212ENST00000448926 RRP1P56182 461 aaKnown RBP5.54□□□□□ -1.52
LMBR1-212ENST00000448926 TXNDC2Q86VQ3 553 aa5.54□□□□□ -1.52
LMBR1-212ENST00000448926 MTHFSP49914 203 aa5.54□□□□□ -1.52
LMBR1-212ENST00000448926 TNNQ9UQP3 1299 aa5.54□□□□□ -1.52
LMBR1-212ENST00000448926 MLH3Q9UHC1 1453 aa5.54□□□□□ -1.52
LMBR1-212ENST00000448926 MYOM1P52179 1685 aa5.54□□□□□ -1.52
LMBR1-212ENST00000448926 EIF3AQ14152 1382 aaKnown RBP5.54□□□□□ -1.52
LMBR1-212ENST00000448926 U2SURPO15042 1029 aaKnown RBP5.54□□□□□ -1.52
LMBR1-212ENST00000448926 BCAR3O75815 825 aa5.54□□□□□ -1.52
LMBR1-212ENST00000448926 BCL11AQ9H165 835 aa5.54□□□□□ -1.52
LMBR1-212ENST00000448926 CAMSAP1Q5T5Y3 1602 aa5.53□□□□□ -1.52
LMBR1-212ENST00000448926 RICTORQ6R327 1708 aa5.53□□□□□ -1.52
LMBR1-212ENST00000448926 ESF1Q9H501 851 aaKnown RBP5.53□□□□□ -1.52
LMBR1-212ENST00000448926 ADGRB3O60242 1522 aa5.53□□□□□ -1.52
LMBR1-212ENST00000448926 PIK3C2GO75747 1445 aa5.53□□□□□ -1.52
LMBR1-212ENST00000448926 VGFO15240 615 aaPredicted RBP5.53□□□□□ -1.52
LMBR1-212ENST00000448926 CABP1Q9NZU7 370 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms