RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 IPO9Q96P70 1041 aaKnown RBP11.32□□□□□ -0.6
CPSF7-206ENST00000448745 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
CPSF7-206ENST00000448745 PLA2R1Q13018 1463 aa11.31□□□□□ -0.6
CPSF7-206ENST00000448745 PKD2Q13563 968 aa11.31□□□□□ -0.6
CPSF7-206ENST00000448745 NPATQ14207 1427 aa11.31□□□□□ -0.6
CPSF7-206ENST00000448745 KANK1Q14678 1352 aa11.31□□□□□ -0.6
CPSF7-206ENST00000448745 ARHGAP31Q2M1Z3 1444 aa11.3□□□□□ -0.6
CPSF7-206ENST00000448745 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
CPSF7-206ENST00000448745 FER1L4A9Z1Z3 1794 aa11.29□□□□□ -0.6
CPSF7-206ENST00000448745 KTN1Q86UP2 1357 aaKnown RBP11.29□□□□□ -0.6
CPSF7-206ENST00000448745 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-206ENST00000448745 MROH2AA6NES4 1674 aa11.29□□□□□ -0.6
CPSF7-206ENST00000448745 MADDQ8WXG6 1647 aa11.29□□□□□ -0.6
CPSF7-206ENST00000448745 PTPRTO14522 1441 aa11.28□□□□□ -0.6
CPSF7-206ENST00000448745 CFAP65Q6ZU64 1925 aaKnown RBP11.28□□□□□ -0.6
CPSF7-206ENST00000448745 USP47Q96K76 1375 aa11.27□□□□□ -0.6
CPSF7-206ENST00000448745 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-206ENST00000448745 NBR1Q14596 966 aa11.26□□□□□ -0.61
CPSF7-206ENST00000448745 RALGAPBQ86X10 1494 aa11.26□□□□□ -0.61
CPSF7-206ENST00000448745 NOS1P29475 1434 aa11.26□□□□□ -0.61
CPSF7-206ENST00000448745 ZMYM3Q14202 1370 aa11.26□□□□□ -0.61
CPSF7-206ENST00000448745 SPHKAPQ2M3C7 1700 aa11.26□□□□□ -0.61
CPSF7-206ENST00000448745 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
CPSF7-206ENST00000448745 UHRF1BP1Q6BDS2 1440 aa11.26□□□□□ -0.61
CPSF7-206ENST00000448745 C3P01024 1663 aa11.25□□□□□ -0.61
CPSF7-206ENST00000448745 PREX1Q8TCU6 1659 aa11.25□□□□□ -0.61
CPSF7-206ENST00000448745 SYNMO15061 1565 aa11.24□□□□□ -0.61
CPSF7-206ENST00000448745 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
CPSF7-206ENST00000448745 TRPM2O94759 1503 aa11.24□□□□□ -0.61
CPSF7-206ENST00000448745 SPATA31D1Q6ZQQ2 1576 aa11.24□□□□□ -0.61
CPSF7-206ENST00000448745 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
CPSF7-206ENST00000448745 FBXO31Q5XUX0 539 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-206ENST00000448745 BRD4O60885 1362 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-206ENST00000448745 LRPPRCP42704 1394 aaKnown RBP11.23□□□□□ -0.61
CPSF7-206ENST00000448745 ERVK-7P63135 1459 aa11.23□□□□□ -0.61
CPSF7-206ENST00000448745 UGGT1Q9NYU2 1555 aa11.23□□□□□ -0.61
CPSF7-206ENST00000448745 PIK3C2BO00750 1634 aa11.23□□□□□ -0.61
CPSF7-206ENST00000448745 PNISRQ8TF01 805 aaKnown RBP11.23□□□□□ -0.61
CPSF7-206ENST00000448745 CLTCL1P53675 1640 aa11.22□□□□□ -0.61
CPSF7-206ENST00000448745 LMTK3Q96Q04 1460 aa11.21□□□□□ -0.61
CPSF7-206ENST00000448745 CEBPAP49715 358 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-206ENST00000448745 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
CPSF7-206ENST00000448745 MS4A1P11836 297 aa11.21□□□□□ -0.62
CPSF7-206ENST00000448745 RALBP1Q15311 655 aa11.21□□□□□ -0.62
CPSF7-206ENST00000448745 PTPRMP28827 1452 aa11.2□□□□□ -0.62
CPSF7-206ENST00000448745 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
CPSF7-206ENST00000448745 USP35Q9P2H5 1018 aa11.2□□□□□ -0.62
CPSF7-206ENST00000448745 MYBBP1AQ9BQG0 1328 aaKnown RBP11.19□□□□□ -0.62
CPSF7-206ENST00000448745 PDE3BQ13370 1112 aa11.19□□□□□ -0.62
CPSF7-206ENST00000448745 ESF1Q9H501 851 aaKnown RBP11.19□□□□□ -0.62
CPSF7-206ENST00000448745 SOCS7O14512 581 aa11.18□□□□□ -0.62
CPSF7-206ENST00000448745 INSRP06213 1382 aa11.18□□□□□ -0.62
CPSF7-206ENST00000448745 CCDC144AA2RUR9 1427 aa11.18□□□□□ -0.62
CPSF7-206ENST00000448745 POLR3GLQ9BT43 218 aa11.18□□□□□ -0.62
CPSF7-206ENST00000448745 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-206ENST00000448745 IDI1Q13907 227 aa11.17□□□□□ -0.62
CPSF7-206ENST00000448745 NEURL4Q96JN8 1562 aa11.17□□□□□ -0.62
CPSF7-206ENST00000448745 SETD1BQ9UPS6 1966 aaKnown RBP11.16□□□□□ -0.62
CPSF7-206ENST00000448745 TNRQ92752 1358 aa11.16□□□□□ -0.62
CPSF7-206ENST00000448745 DDRGK1Q96HY6 314 aa11.15□□□□□ -0.62
CPSF7-206ENST00000448745 TMEM131LA2VDJ0 1609 aa11.15□□□□□ -0.62
CPSF7-206ENST00000448745 LAMC1P11047 1609 aa11.15□□□□□ -0.62
CPSF7-206ENST00000448745 MYO5BQ9ULV0 1848 aa11.15□□□□□ -0.62
CPSF7-206ENST00000448745 ADGRB3O60242 1522 aa11.15□□□□□ -0.62
CPSF7-206ENST00000448745 SLC52A1Q9NWF4 448 aa11.15□□□□□ -0.63
CPSF7-206ENST00000448745 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.63
CPSF7-206ENST00000448745 KIF1BO60333 1816 aa11.14□□□□□ -0.63
CPSF7-206ENST00000448745 PDE4AP27815 886 aa11.14□□□□□ -0.63
CPSF7-206ENST00000448745 TRPM1Q7Z4N2 1603 aa11.13□□□□□ -0.63
CPSF7-206ENST00000448745 MYO3AQ8NEV4 1616 aa11.13□□□□□ -0.63
CPSF7-206ENST00000448745 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
CPSF7-206ENST00000448745 NLRP1Q9C000 1473 aa11.13□□□□□ -0.63
CPSF7-206ENST00000448745 KDM5AP29375 1690 aaKnown RBP11.13□□□□□ -0.63
CPSF7-206ENST00000448745 CARD11Q9BXL7 1154 aa11.12□□□□□ -0.63
CPSF7-206ENST00000448745 BACH2Q9BYV9 841 aa11.12□□□□□ -0.63
CPSF7-206ENST00000448745 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
CPSF7-206ENST00000448745 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
CPSF7-206ENST00000448745 PARD3Q8TEW0 1356 aa11.12□□□□□ -0.63
CPSF7-206ENST00000448745 KCNA4P22459 653 aa11.12□□□□□ -0.63
CPSF7-206ENST00000448745 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
CPSF7-206ENST00000448745 IFT172Q9UG01 1749 aa11.11□□□□□ -0.63
CPSF7-206ENST00000448745 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-206ENST00000448745 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
CPSF7-206ENST00000448745 NLRP13Q86W25 1043 aa11.11□□□□□ -0.63
CPSF7-206ENST00000448745 BLMP54132 1417 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-206ENST00000448745 NEFMP07197 916 aa11.1□□□□□ -0.63
CPSF7-206ENST00000448745 CNGB1Q14028 1251 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-206ENST00000448745 CEP170BQ9Y4F5 1589 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-206ENST00000448745 PPLO60437 1756 aa11.09□□□□□ -0.63
CPSF7-206ENST00000448745 NEXMIFQ5QGS0 1516 aa11.09□□□□□ -0.63
CPSF7-206ENST00000448745 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
CPSF7-206ENST00000448745 ZFYVE9O95405 1425 aa11.08□□□□□ -0.64
CPSF7-206ENST00000448745 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
CPSF7-206ENST00000448745 ILDR2Q71H61 639 aa11.06□□□□□ -0.64
CPSF7-206ENST00000448745 LAS1LQ9Y4W2 734 aaKnown RBP11.06□□□□□ -0.64
CPSF7-206ENST00000448745 NRXN1Q9ULB1 1477 aa11.06□□□□□ -0.64
CPSF7-206ENST00000448745 ST20-MTHFSA0A0A6YYL1 179 aa11.06□□□□□ -0.64
CPSF7-206ENST00000448745 SLIT1O75093 1534 aa11.06□□□□□ -0.64
CPSF7-206ENST00000448745 MYOM2P54296 1465 aa11.05□□□□□ -0.64
CPSF7-206ENST00000448745 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms