RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
RFC4-209ENST00000448497 SPHKAPQ2M3C7 1700 aa9.85□□□□□ -0.83
RFC4-209ENST00000448497 KIF13AQ9H1H9 1805 aa9.84□□□□□ -0.83
RFC4-209ENST00000448497 ABCA6Q8N139 1617 aa9.84□□□□□ -0.83
RFC4-209ENST00000448497 A2MP01023 1474 aa9.84□□□□□ -0.83
RFC4-209ENST00000448497 FRMPD1Q5SYB0 1578 aa9.84□□□□□ -0.83
RFC4-209ENST00000448497 TRPM2O94759 1503 aa9.83□□□□□ -0.84
RFC4-209ENST00000448497 PTPRTO14522 1441 aa9.82□□□□□ -0.84
RFC4-209ENST00000448497 CEP152O94986 1710 aa9.82□□□□□ -0.84
RFC4-209ENST00000448497 ECM2O94769 699 aaPredicted RBP9.82□□□□□ -0.84
RFC4-209ENST00000448497 KANK1Q14678 1352 aa9.82□□□□□ -0.84
RFC4-209ENST00000448497 DIP2CQ9Y2E4 1556 aa9.82□□□□□ -0.84
RFC4-209ENST00000448497 CCDC144AA2RUR9 1427 aa9.82□□□□□ -0.84
RFC4-209ENST00000448497 REREQ9P2R6 1566 aa9.81□□□□□ -0.84
RFC4-209ENST00000448497 EFCAB6Q5THR3 1501 aa9.81□□□□□ -0.84
RFC4-209ENST00000448497 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
RFC4-209ENST00000448497 SPATA31E1Q6ZUB1 1445 aa9.8□□□□□ -0.84
RFC4-209ENST00000448497 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
RFC4-209ENST00000448497 RALGAPBQ86X10 1494 aa9.79□□□□□ -0.84
RFC4-209ENST00000448497 LAMC1P11047 1609 aa9.79□□□□□ -0.84
RFC4-209ENST00000448497 CHRM1P11229 460 aaPredicted RBP9.79□□□□□ -0.84
RFC4-209ENST00000448497 CD44P16070 742 aaKnown RBP9.79□□□□□ -0.84
RFC4-209ENST00000448497 NBPF8Q3BBV2 869 aa9.78□□□□□ -0.84
RFC4-209ENST00000448497 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
RFC4-209ENST00000448497 TSPOAP1O95153 1857 aa9.78□□□□□ -0.84
RFC4-209ENST00000448497 TRPM1Q7Z4N2 1603 aa9.78□□□□□ -0.84
RFC4-209ENST00000448497 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
RFC4-209ENST00000448497 EIF4G2P78344 907 aaKnown RBP eCLIP9.77□□□□□ -0.85
RFC4-209ENST00000448497 POTEHQ6S545 545 aa9.77□□□□□ -0.85
RFC4-209ENST00000448497 KIF1BO60333 1816 aa9.77□□□□□ -0.85
RFC4-209ENST00000448497 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
RFC4-209ENST00000448497 KIF3BO15066 747 aa9.76□□□□□ -0.85
RFC4-209ENST00000448497 FAM69CQ0P6D2 419 aa9.76□□□□□ -0.85
RFC4-209ENST00000448497 CCDC61Q9Y6R9 512 aa9.76□□□□□ -0.85
RFC4-209ENST00000448497 AGLP35573 1532 aa9.76□□□□□ -0.85
RFC4-209ENST00000448497 KIAA1210Q9ULL0 1709 aa9.75□□□□□ -0.85
RFC4-209ENST00000448497 ABCC3O15438 1527 aa9.75□□□□□ -0.85
RFC4-209ENST00000448497 CAMSAP1Q5T5Y3 1602 aa9.74□□□□□ -0.85
RFC4-209ENST00000448497 ARHGAP31Q2M1Z3 1444 aa9.74□□□□□ -0.85
RFC4-209ENST00000448497 PRAG1Q86YV5 1406 aa9.74□□□□□ -0.85
RFC4-209ENST00000448497 IFT172Q9UG01 1749 aa9.74□□□□□ -0.85
RFC4-209ENST00000448497 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
RFC4-209ENST00000448497 GPRASP1Q5JY77 1395 aa9.74□□□□□ -0.85
RFC4-209ENST00000448497 RAPGEF3O95398 923 aa9.73□□□□□ -0.85
RFC4-209ENST00000448497 HSPA5P11021 654 aaKnown RBP9.73□□□□□ -0.85
RFC4-209ENST00000448497 TAOK2Q9UL54 1235 aa9.73□□□□□ -0.85
RFC4-209ENST00000448497 PIK3C2BO00750 1634 aa9.72□□□□□ -0.85
RFC4-209ENST00000448497 MADDQ8WXG6 1647 aa9.72□□□□□ -0.85
RFC4-209ENST00000448497 HAX1O00165 279 aa9.72□□□□□ -0.85
RFC4-209ENST00000448497 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
RFC4-209ENST00000448497 ARID4BQ4LE39 1312 aaPredicted RBP9.72□□□□□ -0.85
RFC4-209ENST00000448497 CNTLNQ9NXG0 1405 aa9.72□□□□□ -0.85
RFC4-209ENST00000448497 PYGBP11216 843 aa9.71□□□□□ -0.86
RFC4-209ENST00000448497 YEATS2Q9ULM3 1422 aa9.71□□□□□ -0.86
RFC4-209ENST00000448497 ARHGEF40Q8TER5 1519 aa9.71□□□□□ -0.86
RFC4-209ENST00000448497 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
RFC4-209ENST00000448497 DCAF11Q8TEB1 546 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 USP47Q96K76 1375 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 NOS1P29475 1434 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 NPATQ14207 1427 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 MYOM2P54296 1465 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 ADGRB3O60242 1522 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 SIGLEC1Q9BZZ2 1709 aa9.7□□□□□ -0.86
RFC4-209ENST00000448497 CLCN6P51797 869 aa9.69□□□□□ -0.86
RFC4-209ENST00000448497 CCDC7Q96M83 1385 aa9.69□□□□□ -0.86
RFC4-209ENST00000448497 PPLO60437 1756 aa9.68□□□□□ -0.86
RFC4-209ENST00000448497 MROH2AA6NES4 1674 aa9.68□□□□□ -0.86
RFC4-209ENST00000448497 IQGAP1P46940 1657 aa9.68□□□□□ -0.86
RFC4-209ENST00000448497 WASHC2AQ641Q2 1341 aa9.68□□□□□ -0.86
RFC4-209ENST00000448497 RGL2O15211 777 aa9.68□□□□□ -0.86
RFC4-209ENST00000448497 ZNF467Q7Z7K2 595 aaPredicted RBP9.68□□□□□ -0.86
RFC4-209ENST00000448497 CFAP65Q6ZU64 1925 aaKnown RBP9.68□□□□□ -0.86
RFC4-209ENST00000448497 NRXN1Q9ULB1 1477 aa9.67□□□□□ -0.86
RFC4-209ENST00000448497 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
RFC4-209ENST00000448497 DDX10Q13206 875 aaKnown RBP9.67□□□□□ -0.86
RFC4-209ENST00000448497 PREX1Q8TCU6 1659 aa9.67□□□□□ -0.86
RFC4-209ENST00000448497 SYNMO15061 1565 aa9.67□□□□□ -0.86
RFC4-209ENST00000448497 HIRIP3Q9BW71 556 aaPredicted RBP9.66□□□□□ -0.86
RFC4-209ENST00000448497 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
RFC4-209ENST00000448497 ROCK2O75116 1388 aaKnown RBP9.65□□□□□ -0.86
RFC4-209ENST00000448497 WASHC2CQ9Y4E1 1318 aa9.65□□□□□ -0.86
RFC4-209ENST00000448497 CCER2I3L3R5 266 aa9.65□□□□□ -0.86
RFC4-209ENST00000448497 CARD11Q9BXL7 1154 aa9.65□□□□□ -0.86
RFC4-209ENST00000448497 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
RFC4-209ENST00000448497 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
RFC4-209ENST00000448497 UGGT1Q9NYU2 1555 aa9.64□□□□□ -0.87
RFC4-209ENST00000448497 SETBP1Q9Y6X0 1596 aa9.64□□□□□ -0.87
RFC4-209ENST00000448497 RGL3Q3MIN7 710 aa9.64□□□□□ -0.87
RFC4-209ENST00000448497 GGT6Q6P531 493 aa9.64□□□□□ -0.87
RFC4-209ENST00000448497 RNF25Q96BH1 459 aaPredicted RBP9.64□□□□□ -0.87
RFC4-209ENST00000448497 KIF12Q96FN5 646 aa9.64□□□□□ -0.87
RFC4-209ENST00000448497 KIF7Q2M1P5 1343 aa9.63□□□□□ -0.87
RFC4-209ENST00000448497 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
RFC4-209ENST00000448497 PCDHB13Q9Y5F0 798 aa9.63□□□□□ -0.87
RFC4-209ENST00000448497 VGFO15240 615 aaPredicted RBP9.62□□□□□ -0.87
RFC4-209ENST00000448497 ZNF326Q5BKZ1 582 aaKnown RBP9.62□□□□□ -0.87
RFC4-209ENST00000448497 SLC52A1Q9NWF4 448 aa9.62□□□□□ -0.87
RFC4-209ENST00000448497 ZFYVE9O95405 1425 aa9.62□□□□□ -0.87
RFC4-209ENST00000448497 SPATA31D1Q6ZQQ2 1576 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms