RNA–Protein interactions for RNA: ENST00000447779.1

RPL39P29-201, Transcript of ribosomal protein L39 pseudogene 29, humanhuman

BASIC

Gene RPL39P29, Length 157 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P29-201ENST00000447779 LAPTM4AQ15012 233 aa5.34□□□□□ -1.55
RPL39P29-201ENST00000447779 TJAP1Q5JTD0 557 aa5.34□□□□□ -1.55
RPL39P29-201ENST00000447779 TTC13Q8NBP0 860 aa5.34□□□□□ -1.55
RPL39P29-201ENST00000447779 RBM27Q9P2N5 1060 aaKnown RBP5.34□□□□□ -1.55
RPL39P29-201ENST00000447779 OATP04181 439 aa5.33□□□□□ -1.56
RPL39P29-201ENST00000447779 PRSS12P56730 875 aa5.33□□□□□ -1.56
RPL39P29-201ENST00000447779 PACS2Q86VP3 889 aa5.33□□□□□ -1.56
RPL39P29-201ENST00000447779 PARP9Q8IXQ6 854 aa5.32□□□□□ -1.56
RPL39P29-201ENST00000447779 IL27Q8NEV9 243 aa5.32□□□□□ -1.56
RPL39P29-201ENST00000447779 FAM198AQ9UFP1 575 aa5.32□□□□□ -1.56
RPL39P29-201ENST00000447779 C3orf80F5H4A9 247 aa5.31□□□□□ -1.56
RPL39P29-201ENST00000447779 PADI6Q6TGC4 694 aa5.31□□□□□ -1.56
RPL39P29-201ENST00000447779 CDCA7LQ96GN5 454 aa5.31□□□□□ -1.56
RPL39P29-201ENST00000447779 CLCN1P35523 988 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 PPP4CP60510 307 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 TTLL12Q14166 644 aaPredicted RBP5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 TRAF7Q6Q0C0 670 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 ERICH6Q7L0X2 663 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 DDRGK1Q96HY6 314 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 TMUB1Q9BVT8 246 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 FAM117AQ9C073 453 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 ADGRG1Q9Y653 693 aa5.3□□□□□ -1.56
RPL39P29-201ENST00000447779 GFRA3O60609 400 aa5.29□□□□□ -1.56
RPL39P29-201ENST00000447779 SAMD7Q7Z3H4 446 aa5.29□□□□□ -1.56
RPL39P29-201ENST00000447779 METTL3Q86U44 580 aaKnown RBP5.29□□□□□ -1.56
RPL39P29-201ENST00000447779 PXYLP1Q8TE99 480 aa5.29□□□□□ -1.56
RPL39P29-201ENST00000447779 PHOX2BQ99453 314 aa5.29□□□□□ -1.56
RPL39P29-201ENST00000447779 GPCPD1Q9NPB8 672 aa5.29□□□□□ -1.56
RPL39P29-201ENST00000447779 V9GY48 417 aaPredicted RBP5.29□□□□□ -1.56
RPL39P29-201ENST00000447779 SMAPO00193 183 aa5.28□□□□□ -1.56
RPL39P29-201ENST00000447779 GIGYF2Q6Y7W6 1299 aaKnown RBP5.28□□□□□ -1.56
RPL39P29-201ENST00000447779 RBM46Q8TBY0 533 aaKnown RBP5.28□□□□□ -1.56
RPL39P29-201ENST00000447779 MTRQ99707 1265 aa5.28□□□□□ -1.56
RPL39P29-201ENST00000447779 REPIN1Q9BWE0 567 aaKnown RBP5.28□□□□□ -1.56
RPL39P29-201ENST00000447779 PRKD2Q9BZL6 878 aa5.28□□□□□ -1.56
RPL39P29-201ENST00000447779 IL21Q9HBE4 155 aa5.28□□□□□ -1.56
RPL39P29-201ENST00000447779 PLEKHG3A1L390 1219 aa5.27□□□□□ -1.57
RPL39P29-201ENST00000447779 NRG2O14511 850 aaPredicted RBP5.27□□□□□ -1.57
RPL39P29-201ENST00000447779 MDM2Q00987 491 aaPredicted RBP5.27□□□□□ -1.57
RPL39P29-201ENST00000447779 FAM161AQ3B820 660 aa5.27□□□□□ -1.57
RPL39P29-201ENST00000447779 PPP1R18Q6NYC8 613 aa5.27□□□□□ -1.57
RPL39P29-201ENST00000447779 TATDN2Q93075 761 aa5.27□□□□□ -1.57
RPL39P29-201ENST00000447779 MS4A1P11836 297 aa5.26□□□□□ -1.57
RPL39P29-201ENST00000447779 SSTR3P32745 418 aaPredicted RBP5.26□□□□□ -1.57
RPL39P29-201ENST00000447779 EYA1Q99502 592 aa5.26□□□□□ -1.57
RPL39P29-201ENST00000447779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.25□□□□□ -1.57
RPL39P29-201ENST00000447779 NBPF26B4DH59 902 aa5.25□□□□□ -1.57
RPL39P29-201ENST00000447779 ZNF516Q92618 1163 aa5.25□□□□□ -1.57
RPL39P29-201ENST00000447779 GOPCQ9HD26 462 aa5.25□□□□□ -1.57
RPL39P29-201ENST00000447779 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.25□□□□□ -1.57
RPL39P29-201ENST00000447779 PNMA3Q9UL41 463 aa5.25□□□□□ -1.57
RPL39P29-201ENST00000447779 RCCD1A6NED2 376 aa5.24□□□□□ -1.57
RPL39P29-201ENST00000447779 APLP1P51693 650 aa5.24□□□□□ -1.57
RPL39P29-201ENST00000447779 NUDT18Q6ZVK8 323 aa5.24□□□□□ -1.57
RPL39P29-201ENST00000447779 FAM217BQ9NTX9 383 aaPredicted RBP5.24□□□□□ -1.57
RPL39P29-201ENST00000447779 DNAJB2P25686 324 aa5.22□□□□□ -1.57
RPL39P29-201ENST00000447779 NKX2-3Q8TAU0 364 aa5.22□□□□□ -1.57
RPL39P29-201ENST00000447779 NLRP7Q8WX94 980 aa5.22□□□□□ -1.57
RPL39P29-201ENST00000447779 BEGAINQ9BUH8 593 aa5.22□□□□□ -1.57
RPL39P29-201ENST00000447779 RSPH6AQ9H0K4 717 aa5.22□□□□□ -1.57
RPL39P29-201ENST00000447779 TIMELESSQ9UNS1 1208 aa5.22□□□□□ -1.57
RPL39P29-201ENST00000447779 SH3D19Q5HYK7 790 aa5.21□□□□□ -1.58
RPL39P29-201ENST00000447779 HDGFP51858 240 aaKnown RBP5.2□□□□□ -1.58
RPL39P29-201ENST00000447779 NECTIN2Q92692 538 aa5.2□□□□□ -1.58
RPL39P29-201ENST00000447779 PCMTD1Q96MG8 357 aaPredicted RBP5.2□□□□□ -1.58
RPL39P29-201ENST00000447779 TMEM134Q9H6X4 195 aa5.2□□□□□ -1.58
RPL39P29-201ENST00000447779 SKIV2LQ15477 1246 aaKnown RBP5.19□□□□□ -1.58
RPL39P29-201ENST00000447779 DIXDC1Q155Q3 683 aa5.19□□□□□ -1.58
RPL39P29-201ENST00000447779 SWT1Q5T5J6 900 aaKnown RBP5.19□□□□□ -1.58
RPL39P29-201ENST00000447779 C14orf37Q86TY3 774 aa5.19□□□□□ -1.58
RPL39P29-201ENST00000447779 SULF1Q8IWU6 871 aa5.19□□□□□ -1.58
RPL39P29-201ENST00000447779 PDZRN3Q9UPQ7 1066 aa5.19□□□□□ -1.58
RPL39P29-201ENST00000447779 ZPR1O75312 459 aa5.18□□□□□ -1.58
RPL39P29-201ENST00000447779 CD46P15529 392 aa5.18□□□□□ -1.58
RPL39P29-201ENST00000447779 TRIM67Q6ZTA4 783 aa5.18□□□□□ -1.58
RPL39P29-201ENST00000447779 SLF2Q8IX21 1173 aa5.18□□□□□ -1.58
RPL39P29-201ENST00000447779 EMID1Q96A84 441 aaPredicted RBP5.18□□□□□ -1.58
RPL39P29-201ENST00000447779 DDX11L8A8MPP1 907 aa5.17□□□□□ -1.58
RPL39P29-201ENST00000447779 GGCXP38435 758 aa5.17□□□□□ -1.58
RPL39P29-201ENST00000447779 ZNF787Q6DD87 383 aa5.17□□□□□ -1.58
RPL39P29-201ENST00000447779 TBC1D2Q9BYX2 928 aa5.17□□□□□ -1.58
RPL39P29-201ENST00000447779 RNF40O75150 1001 aa5.16□□□□□ -1.58
RPL39P29-201ENST00000447779 COPS2P61201 443 aa5.16□□□□□ -1.58
RPL39P29-201ENST00000447779 RSPH4AQ5TD94 716 aa5.16□□□□□ -1.58
RPL39P29-201ENST00000447779 MYSM1Q5VVJ2 828 aa5.16□□□□□ -1.58
RPL39P29-201ENST00000447779 SPIRE2Q8WWL2 714 aa5.16□□□□□ -1.58
RPL39P29-201ENST00000447779 POLR3EQ9NVU0 708 aa5.15□□□□□ -1.59
RPL39P29-201ENST00000447779 RNF223E7ERA6 249 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 CLK2P49760 499 aaKnown RBP5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 PRR20EP86478 221 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 PRR20CP86479 221 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 PRR20DP86480 221 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 PRR20BP86481 221 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 PRR20AP86496 221 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 FLIIQ13045 1269 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 TUSC1Q2TAM9 212 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 NUTM1Q86Y26 1132 aa5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 PROCA1Q8NCQ7 364 aaPredicted RBP5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 ZNF775Q96BV0 537 aaPredicted RBP5.14□□□□□ -1.59
RPL39P29-201ENST00000447779 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms