RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PIK3C2BO00750 1634 aa11.27□□□□□ -0.61
LRRC28-203ENST00000447360 KDM5AP29375 1690 aaKnown RBP11.27□□□□□ -0.61
LRRC28-203ENST00000447360 CEP152O94986 1710 aa11.26□□□□□ -0.61
LRRC28-203ENST00000447360 BCANQ96GW7 911 aa11.26□□□□□ -0.61
LRRC28-203ENST00000447360 LRP6O75581 1613 aa11.26□□□□□ -0.61
LRRC28-203ENST00000447360 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
LRRC28-203ENST00000447360 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-203ENST00000447360 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
LRRC28-203ENST00000447360 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
LRRC28-203ENST00000447360 CADPS2Q86UW7 1296 aa11.25□□□□□ -0.61
LRRC28-203ENST00000447360 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
LRRC28-203ENST00000447360 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-203ENST00000447360 LMTK2Q8IWU2 1503 aa11.24□□□□□ -0.61
LRRC28-203ENST00000447360 C19orf44Q9H6X5 657 aa11.23□□□□□ -0.61
LRRC28-203ENST00000447360 TBX22Q9Y458 520 aa11.23□□□□□ -0.61
LRRC28-203ENST00000447360 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
LRRC28-203ENST00000447360 NOS1P29475 1434 aa11.23□□□□□ -0.61
LRRC28-203ENST00000447360 ATF3P18847 181 aa11.22□□□□□ -0.61
LRRC28-203ENST00000447360 ADGRB3O60242 1522 aa11.21□□□□□ -0.61
LRRC28-203ENST00000447360 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
LRRC28-203ENST00000447360 ABCC5O15440 1437 aa11.2□□□□□ -0.62
LRRC28-203ENST00000447360 ZFYVE9O95405 1425 aa11.2□□□□□ -0.62
LRRC28-203ENST00000447360 PPP1R15AO75807 674 aaPredicted RBP11.2□□□□□ -0.62
LRRC28-203ENST00000447360 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
LRRC28-203ENST00000447360 AFF2P51816 1311 aa11.19□□□□□ -0.62
LRRC28-203ENST00000447360 KANK4Q5T7N3 995 aaPredicted RBP11.19□□□□□ -0.62
LRRC28-203ENST00000447360 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-203ENST00000447360 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-203ENST00000447360 RBM6P78332 1123 aaKnown RBP11.18□□□□□ -0.62
LRRC28-203ENST00000447360 PPP4R3CPQ6ZMV5 832 aa11.18□□□□□ -0.62
LRRC28-203ENST00000447360 BRINP3Q76B58 766 aa11.18□□□□□ -0.62
LRRC28-203ENST00000447360 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-203ENST00000447360 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
LRRC28-203ENST00000447360 RIMS2Q9UQ26 1411 aa11.18□□□□□ -0.62
LRRC28-203ENST00000447360 SHPRHQ149N8 1683 aa11.17□□□□□ -0.62
LRRC28-203ENST00000447360 PIK3R4Q99570 1358 aa11.17□□□□□ -0.62
LRRC28-203ENST00000447360 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
LRRC28-203ENST00000447360 QTRT2Q9H974 415 aaKnown RBP11.17□□□□□ -0.62
LRRC28-203ENST00000447360 VPS8Q8N3P4 1428 aa11.17□□□□□ -0.62
LRRC28-203ENST00000447360 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
LRRC28-203ENST00000447360 LRRC59Q96AG4 307 aaKnown RBP11.16□□□□□ -0.62
LRRC28-203ENST00000447360 RPRD2Q5VT52 1461 aaKnown RBP11.16□□□□□ -0.62
LRRC28-203ENST00000447360 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
LRRC28-203ENST00000447360 CHD2O14647 1828 aaKnown RBP11.16□□□□□ -0.62
LRRC28-203ENST00000447360 DAPK1P53355 1430 aa11.15□□□□□ -0.62
LRRC28-203ENST00000447360 DIP2AQ14689 1571 aa11.15□□□□□ -0.62
LRRC28-203ENST00000447360 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
LRRC28-203ENST00000447360 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
LRRC28-203ENST00000447360 C8orf37Q96NL8 207 aa11.14□□□□□ -0.63
LRRC28-203ENST00000447360 RGS12O14924 1447 aa11.14□□□□□ -0.63
LRRC28-203ENST00000447360 DCCP43146 1447 aa11.14□□□□□ -0.63
LRRC28-203ENST00000447360 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
LRRC28-203ENST00000447360 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
LRRC28-203ENST00000447360 AMOTL2Q9Y2J4 779 aa11.13□□□□□ -0.63
LRRC28-203ENST00000447360 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-203ENST00000447360 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
LRRC28-203ENST00000447360 ATAD2Q6PL18 1390 aa11.12□□□□□ -0.63
LRRC28-203ENST00000447360 EP400Q96L91 3159 aa11.11□□□□□ -0.63
LRRC28-203ENST00000447360 CROCC2H7BZ55 1655 aa11.11□□□□□ -0.63
LRRC28-203ENST00000447360 ASXL1Q8IXJ9 1541 aa11.1□□□□□ -0.63
LRRC28-203ENST00000447360 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
LRRC28-203ENST00000447360 MAPK8IP2Q13387 824 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-203ENST00000447360 TMEM131LA2VDJ0 1609 aa11.09□□□□□ -0.63
LRRC28-203ENST00000447360 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
LRRC28-203ENST00000447360 PNPLA6Q8IY17 1366 aa11.09□□□□□ -0.63
LRRC28-203ENST00000447360 MST1RQ04912 1400 aa11.09□□□□□ -0.63
LRRC28-203ENST00000447360 CCDC125Q86Z20 511 aa11.08□□□□□ -0.64
LRRC28-203ENST00000447360 PTPRUQ92729 1446 aa11.08□□□□□ -0.64
LRRC28-203ENST00000447360 ADGRL2O95490 1459 aa11.07□□□□□ -0.64
LRRC28-203ENST00000447360 TRPC5Q9UL62 973 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-203ENST00000447360 TRPM2O94759 1503 aa11.07□□□□□ -0.64
LRRC28-203ENST00000447360 ANKRD50Q9ULJ7 1429 aa11.07□□□□□ -0.64
LRRC28-203ENST00000447360 ADAMTS2O95450 1211 aa11.06□□□□□ -0.64
LRRC28-203ENST00000447360 FNBP4Q8N3X1 1017 aaPredicted RBP11.06□□□□□ -0.64
LRRC28-203ENST00000447360 USP21Q9UK80 565 aa11.06□□□□□ -0.64
LRRC28-203ENST00000447360 APLP2Q06481 763 aa11.05□□□□□ -0.64
LRRC28-203ENST00000447360 DDX17Q92841 729 aaKnown RBP11.05□□□□□ -0.64
LRRC28-203ENST00000447360 GCC2Q8IWJ2 1684 aa11.04□□□□□ -0.64
LRRC28-203ENST00000447360 NHSL1Q5SYE7 1610 aa11.04□□□□□ -0.64
LRRC28-203ENST00000447360 POTEDQ86YR6 584 aa11.03□□□□□ -0.64
LRRC28-203ENST00000447360 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.64
LRRC28-203ENST00000447360 PTCH1Q13635 1447 aa11.02□□□□□ -0.64
LRRC28-203ENST00000447360 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.64
LRRC28-203ENST00000447360 SOS2Q07890 1332 aaPredicted RBP11.02□□□□□ -0.65
LRRC28-203ENST00000447360 SETBP1Q9Y6X0 1596 aa11.02□□□□□ -0.65
LRRC28-203ENST00000447360 ATRNO75882 1429 aa11.01□□□□□ -0.65
LRRC28-203ENST00000447360 METP08581 1390 aa11.01□□□□□ -0.65
LRRC28-203ENST00000447360 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
LRRC28-203ENST00000447360 UNC13BO14795 1591 aa11□□□□□ -0.65
LRRC28-203ENST00000447360 XRN1Q8IZH2 1706 aaKnown RBP11□□□□□ -0.65
LRRC28-203ENST00000447360 FAM50AQ14320 339 aaKnown RBP10.98□□□□□ -0.65
LRRC28-203ENST00000447360 GJD4Q96KN9 370 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-203ENST00000447360 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
LRRC28-203ENST00000447360 ORAI2Q96SN7 254 aa10.97□□□□□ -0.65
LRRC28-203ENST00000447360 BCL9LQ86UU0 1499 aa10.97□□□□□ -0.65
LRRC28-203ENST00000447360 LAMC1P11047 1609 aa10.96□□□□□ -0.65
LRRC28-203ENST00000447360 NRXN3Q9Y4C0 1643 aa10.96□□□□□ -0.65
LRRC28-203ENST00000447360 BLMP54132 1417 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-203ENST00000447360 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
LRRC28-203ENST00000447360 NUP155O75694 1391 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms