RNA–Protein interactions for RNA: ENST00000446933.1

KNOP1P3-201, Transcript of lysine rich nucleolar protein 1 pseudogene 3, humanhuman

BASIC

Gene KNOP1P3, Length 426 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P3-201ENST00000446933 CEBPAP49715 358 aaPredicted RBP7.69□□□□□ -1.18
KNOP1P3-201ENST00000446933 NUP155O75694 1391 aa7.69□□□□□ -1.18
KNOP1P3-201ENST00000446933 TNRQ92752 1358 aa7.69□□□□□ -1.18
KNOP1P3-201ENST00000446933 CEP170BQ9Y4F5 1589 aaPredicted RBP7.68□□□□□ -1.18
KNOP1P3-201ENST00000446933 PIK3C2BO00750 1634 aa7.68□□□□□ -1.18
KNOP1P3-201ENST00000446933 MYO3AQ8NEV4 1616 aa7.68□□□□□ -1.18
KNOP1P3-201ENST00000446933 E9PCH4 1651 aa7.68□□□□□ -1.18
KNOP1P3-201ENST00000446933 NEURL4Q96JN8 1562 aa7.67□□□□□ -1.18
KNOP1P3-201ENST00000446933 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 ITGAEP38570 1179 aa7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 PKD2Q13563 968 aa7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 FBXO31Q5XUX0 539 aaPredicted RBP7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 THEMISQ8N1K5 641 aaPredicted RBP7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 ZNF692Q9BU19 519 aaPredicted RBP7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 MED14O60244 1454 aa7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 SLIT1O75093 1534 aa7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 SYNMO15061 1565 aa7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 STRCQ7RTU9 1775 aa7.66□□□□□ -1.18
KNOP1P3-201ENST00000446933 UBR1Q8IWV7 1749 aa7.65□□□□□ -1.18
KNOP1P3-201ENST00000446933 UGGT1Q9NYU2 1555 aa7.65□□□□□ -1.18
KNOP1P3-201ENST00000446933 ARHGAP23Q9P227 1491 aa7.65□□□□□ -1.18
KNOP1P3-201ENST00000446933 STAG3Q9UJ98 1225 aa7.65□□□□□ -1.18
KNOP1P3-201ENST00000446933 SPHKAPQ2M3C7 1700 aa7.64□□□□□ -1.19
KNOP1P3-201ENST00000446933 TRPM2O94759 1503 aa7.64□□□□□ -1.19
KNOP1P3-201ENST00000446933 RAB3GAP2Q9H2M9 1393 aa7.64□□□□□ -1.19
KNOP1P3-201ENST00000446933 TRIM26Q12899 539 aaPredicted RBP7.64□□□□□ -1.19
KNOP1P3-201ENST00000446933 IDI1Q13907 227 aa7.63□□□□□ -1.19
KNOP1P3-201ENST00000446933 TMEM131LA2VDJ0 1609 aa7.63□□□□□ -1.19
KNOP1P3-201ENST00000446933 MPHOSPH9Q99550 1183 aa7.62□□□□□ -1.19
KNOP1P3-201ENST00000446933 ADGRB3O60242 1522 aa7.62□□□□□ -1.19
KNOP1P3-201ENST00000446933 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
KNOP1P3-201ENST00000446933 TMEM2Q9UHN6 1383 aa7.61□□□□□ -1.19
KNOP1P3-201ENST00000446933 HDGFP51858 240 aaKnown RBP7.61□□□□□ -1.19
KNOP1P3-201ENST00000446933 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
KNOP1P3-201ENST00000446933 ZFYVE9O95405 1425 aa7.61□□□□□ -1.19
KNOP1P3-201ENST00000446933 ANKLE2Q86XL3 938 aa7.6□□□□□ -1.19
KNOP1P3-201ENST00000446933 KIF1BO60333 1816 aa7.59□□□□□ -1.19
KNOP1P3-201ENST00000446933 RPGRIP1LQ68CZ1 1315 aa7.59□□□□□ -1.19
KNOP1P3-201ENST00000446933 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.59□□□□□ -1.19
KNOP1P3-201ENST00000446933 ANKRD30BQ9BXX2 1392 aa7.59□□□□□ -1.2
KNOP1P3-201ENST00000446933 SCAF11Q99590 1463 aaKnown RBP7.58□□□□□ -1.2
KNOP1P3-201ENST00000446933 HSPA2P54652 639 aa7.58□□□□□ -1.2
KNOP1P3-201ENST00000446933 TRIM52Q96A61 297 aa7.58□□□□□ -1.2
KNOP1P3-201ENST00000446933 SPATA31E1Q6ZUB1 1445 aa7.58□□□□□ -1.2
KNOP1P3-201ENST00000446933 MYO5BQ9ULV0 1848 aa7.57□□□□□ -1.2
KNOP1P3-201ENST00000446933 CLTCL1P53675 1640 aa7.57□□□□□ -1.2
KNOP1P3-201ENST00000446933 EID1Q9Y6B2 187 aa7.57□□□□□ -1.2
KNOP1P3-201ENST00000446933 IQGAP1P46940 1657 aa7.57□□□□□ -1.2
KNOP1P3-201ENST00000446933 IQSEC2Q5JU85 1478 aa7.56□□□□□ -1.2
KNOP1P3-201ENST00000446933 CCDC144AA2RUR9 1427 aa7.56□□□□□ -1.2
KNOP1P3-201ENST00000446933 LTKP29376 864 aa7.56□□□□□ -1.2
KNOP1P3-201ENST00000446933 PIK3R4Q99570 1358 aa7.56□□□□□ -1.2
KNOP1P3-201ENST00000446933 PLEKHG1Q9ULL1 1385 aa7.56□□□□□ -1.2
KNOP1P3-201ENST00000446933 DIP2AQ14689 1571 aa7.55□□□□□ -1.2
KNOP1P3-201ENST00000446933 NPHP4O75161 1426 aaPredicted RBP7.55□□□□□ -1.2
KNOP1P3-201ENST00000446933 SPOCK2Q92563 424 aa7.55□□□□□ -1.2
KNOP1P3-201ENST00000446933 SETBP1Q9Y6X0 1596 aa7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 PRAG1Q86YV5 1406 aa7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 NEXMIFQ5QGS0 1516 aa7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 VGFO15240 615 aaPredicted RBP7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 CACNB1Q02641 598 aaPredicted RBP7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 TXNDC2Q86VQ3 553 aa7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 TBX22Q9Y458 520 aa7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 PPLO60437 1756 aa7.54□□□□□ -1.2
KNOP1P3-201ENST00000446933 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
KNOP1P3-201ENST00000446933 RIMS2Q9UQ26 1411 aa7.53□□□□□ -1.2
KNOP1P3-201ENST00000446933 LTBP4Q8N2S1 1624 aa7.53□□□□□ -1.2
KNOP1P3-201ENST00000446933 IFT172Q9UG01 1749 aa7.53□□□□□ -1.2
KNOP1P3-201ENST00000446933 PLCB2Q00722 1185 aa7.53□□□□□ -1.2
KNOP1P3-201ENST00000446933 NRXN1Q9ULB1 1477 aa7.53□□□□□ -1.2
KNOP1P3-201ENST00000446933 NCKAP5LQ9HCH0 1330 aa7.52□□□□□ -1.2
KNOP1P3-201ENST00000446933 NCOA3Q9Y6Q9 1424 aa7.52□□□□□ -1.2
KNOP1P3-201ENST00000446933 CPS1P31327 1500 aa7.52□□□□□ -1.2
KNOP1P3-201ENST00000446933 CHD2O14647 1828 aaKnown RBP7.52□□□□□ -1.21
KNOP1P3-201ENST00000446933 MYOM2P54296 1465 aa7.51□□□□□ -1.21
KNOP1P3-201ENST00000446933 NRXN3Q9Y4C0 1643 aa7.51□□□□□ -1.21
KNOP1P3-201ENST00000446933 ADAMTS13Q76LX8 1427 aa7.51□□□□□ -1.21
KNOP1P3-201ENST00000446933 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
KNOP1P3-201ENST00000446933 DHX57Q6P158 1386 aaKnown RBP7.5□□□□□ -1.21
KNOP1P3-201ENST00000446933 KCNA6P17658 529 aa7.5□□□□□ -1.21
KNOP1P3-201ENST00000446933 SETD1AO15047 1707 aaKnown RBP7.49□□□□□ -1.21
KNOP1P3-201ENST00000446933 NKTRP30414 1462 aaKnown RBP7.49□□□□□ -1.21
KNOP1P3-201ENST00000446933 KLHL34Q8N239 644 aa7.49□□□□□ -1.21
KNOP1P3-201ENST00000446933 PLCD3Q8N3E9 789 aa7.49□□□□□ -1.21
KNOP1P3-201ENST00000446933 TIMELESSQ9UNS1 1208 aa7.49□□□□□ -1.21
KNOP1P3-201ENST00000446933 PIK3C2GO75747 1445 aa7.49□□□□□ -1.21
KNOP1P3-201ENST00000446933 LAMC1P11047 1609 aa7.49□□□□□ -1.21
KNOP1P3-201ENST00000446933 SIRT1Q96EB6 747 aa7.48□□□□□ -1.21
KNOP1P3-201ENST00000446933 ZBTB47Q9UFB7 747 aaPredicted RBP7.48□□□□□ -1.21
KNOP1P3-201ENST00000446933 STRCP1A6NGW2 1772 aa7.48□□□□□ -1.21
KNOP1P3-201ENST00000446933 KIAA1210Q9ULL0 1709 aa7.47□□□□□ -1.21
KNOP1P3-201ENST00000446933 TECPR2O15040 1411 aa7.47□□□□□ -1.21
KNOP1P3-201ENST00000446933 C14orf93Q9H972 538 aaKnown RBP7.47□□□□□ -1.21
KNOP1P3-201ENST00000446933 ALKQ9UM73 1620 aa7.47□□□□□ -1.21
KNOP1P3-201ENST00000446933 XRN1Q8IZH2 1706 aaKnown RBP7.47□□□□□ -1.21
KNOP1P3-201ENST00000446933 PPP1R15AO75807 674 aaPredicted RBP7.46□□□□□ -1.22
KNOP1P3-201ENST00000446933 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.22
KNOP1P3-201ENST00000446933 MIER1Q8N108 512 aa7.46□□□□□ -1.22
KNOP1P3-201ENST00000446933 CERKQ8TCT0 537 aa7.46□□□□□ -1.22
KNOP1P3-201ENST00000446933 LRRC7Q96NW7 1537 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms