RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 IDI1Q13907 227 aa12.95□□□□□ -0.34
COL6A4P1-201ENST00000446690 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
COL6A4P1-201ENST00000446690 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
COL6A4P1-201ENST00000446690 RALBP1Q15311 655 aa12.95□□□□□ -0.34
COL6A4P1-201ENST00000446690 EIF3AQ14152 1382 aaKnown RBP12.95□□□□□ -0.34
COL6A4P1-201ENST00000446690 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
COL6A4P1-201ENST00000446690 MYOM2P54296 1465 aa12.94□□□□□ -0.34
COL6A4P1-201ENST00000446690 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
COL6A4P1-201ENST00000446690 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
COL6A4P1-201ENST00000446690 CDCA8Q53HL2 280 aa12.94□□□□□ -0.34
COL6A4P1-201ENST00000446690 FBXO31Q5XUX0 539 aaPredicted RBP12.94□□□□□ -0.34
COL6A4P1-201ENST00000446690 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
COL6A4P1-201ENST00000446690 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
COL6A4P1-201ENST00000446690 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
COL6A4P1-201ENST00000446690 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
COL6A4P1-201ENST00000446690 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
COL6A4P1-201ENST00000446690 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
COL6A4P1-201ENST00000446690 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
COL6A4P1-201ENST00000446690 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
COL6A4P1-201ENST00000446690 FKBP8Q14318 412 aa12.92□□□□□ -0.34
COL6A4P1-201ENST00000446690 ZMYM4Q5VZL5 1548 aa12.92□□□□□ -0.34
COL6A4P1-201ENST00000446690 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
COL6A4P1-201ENST00000446690 SLC52A1Q9NWF4 448 aa12.91□□□□□ -0.34
COL6A4P1-201ENST00000446690 ARHGAP31Q2M1Z3 1444 aa12.91□□□□□ -0.34
COL6A4P1-201ENST00000446690 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
COL6A4P1-201ENST00000446690 NEFLP07196 543 aa12.9□□□□□ -0.34
COL6A4P1-201ENST00000446690 IQGAP1P46940 1657 aa12.9□□□□□ -0.34
COL6A4P1-201ENST00000446690 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
COL6A4P1-201ENST00000446690 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
COL6A4P1-201ENST00000446690 SIGLEC1Q9BZZ2 1709 aa12.89□□□□□ -0.35
COL6A4P1-201ENST00000446690 KNSTRNQ9Y448 316 aa12.89□□□□□ -0.35
COL6A4P1-201ENST00000446690 SYNMO15061 1565 aa12.89□□□□□ -0.35
COL6A4P1-201ENST00000446690 BCANQ96GW7 911 aa12.89□□□□□ -0.35
COL6A4P1-201ENST00000446690 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
COL6A4P1-201ENST00000446690 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
COL6A4P1-201ENST00000446690 ESF1Q9H501 851 aaKnown RBP12.88□□□□□ -0.35
COL6A4P1-201ENST00000446690 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
COL6A4P1-201ENST00000446690 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 PARD3Q8TEW0 1356 aa12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
COL6A4P1-201ENST00000446690 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
COL6A4P1-201ENST00000446690 STK26Q9P289 416 aa12.84□□□□□ -0.35
COL6A4P1-201ENST00000446690 PPLO60437 1756 aa12.84□□□□□ -0.35
COL6A4P1-201ENST00000446690 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
COL6A4P1-201ENST00000446690 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.35
COL6A4P1-201ENST00000446690 SAFB2Q14151 953 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL6A4P1-201ENST00000446690 ERVK-7P63135 1459 aa12.82□□□□□ -0.36
COL6A4P1-201ENST00000446690 AGLP35573 1532 aa12.82□□□□□ -0.36
COL6A4P1-201ENST00000446690 NEXMIFQ5QGS0 1516 aa12.82□□□□□ -0.36
COL6A4P1-201ENST00000446690 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
COL6A4P1-201ENST00000446690 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
COL6A4P1-201ENST00000446690 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
COL6A4P1-201ENST00000446690 SETBP1Q9Y6X0 1596 aa12.81□□□□□ -0.36
COL6A4P1-201ENST00000446690 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
COL6A4P1-201ENST00000446690 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
COL6A4P1-201ENST00000446690 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
COL6A4P1-201ENST00000446690 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
COL6A4P1-201ENST00000446690 CLTCQ00610 1675 aaKnown RBP12.79□□□□□ -0.36
COL6A4P1-201ENST00000446690 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
COL6A4P1-201ENST00000446690 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
COL6A4P1-201ENST00000446690 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
COL6A4P1-201ENST00000446690 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
COL6A4P1-201ENST00000446690 ZMYM3Q14202 1370 aa12.78□□□□□ -0.36
COL6A4P1-201ENST00000446690 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
COL6A4P1-201ENST00000446690 KDM5AP29375 1690 aaKnown RBP12.78□□□□□ -0.36
COL6A4P1-201ENST00000446690 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.36
COL6A4P1-201ENST00000446690 ARHGEF40Q8TER5 1519 aa12.77□□□□□ -0.36
COL6A4P1-201ENST00000446690 ZFYVE9O95405 1425 aa12.77□□□□□ -0.37
COL6A4P1-201ENST00000446690 EVC2Q86UK5 1308 aa12.76□□□□□ -0.37
COL6A4P1-201ENST00000446690 POGKQ9P215 609 aa12.76□□□□□ -0.37
COL6A4P1-201ENST00000446690 ASXL1Q8IXJ9 1541 aa12.76□□□□□ -0.37
COL6A4P1-201ENST00000446690 PLPPR3Q6T4P5 718 aa12.76□□□□□ -0.37
COL6A4P1-201ENST00000446690 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
COL6A4P1-201ENST00000446690 PRAM1Q96QH2 718 aa12.75□□□□□ -0.37
COL6A4P1-201ENST00000446690 MYO5BQ9ULV0 1848 aa12.74□□□□□ -0.37
COL6A4P1-201ENST00000446690 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
COL6A4P1-201ENST00000446690 MYOM1P52179 1685 aa12.74□□□□□ -0.37
COL6A4P1-201ENST00000446690 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
COL6A4P1-201ENST00000446690 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL6A4P1-201ENST00000446690 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
COL6A4P1-201ENST00000446690 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
COL6A4P1-201ENST00000446690 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
COL6A4P1-201ENST00000446690 QRICH2Q9H0J4 1663 aa12.73□□□□□ -0.37
COL6A4P1-201ENST00000446690 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
COL6A4P1-201ENST00000446690 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
COL6A4P1-201ENST00000446690 SPATA31D1Q6ZQQ2 1576 aa12.72□□□□□ -0.37
COL6A4P1-201ENST00000446690 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
COL6A4P1-201ENST00000446690 RIMS2Q9UQ26 1411 aa12.72□□□□□ -0.37
COL6A4P1-201ENST00000446690 NPC1L1Q9UHC9 1359 aa12.71□□□□□ -0.37
COL6A4P1-201ENST00000446690 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
COL6A4P1-201ENST00000446690 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.38
COL6A4P1-201ENST00000446690 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.38
COL6A4P1-201ENST00000446690 MORC1Q86VD1 984 aa12.7□□□□□ -0.38
COL6A4P1-201ENST00000446690 TNRQ92752 1358 aa12.69□□□□□ -0.38
COL6A4P1-201ENST00000446690 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms