RNA–Protein interactions for RNA: ENST00000446561.1

SEC23IP-203, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-203ENST00000446561 CEP152O94986 1710 aa9.75□□□□□ -0.85
SEC23IP-203ENST00000446561 KDM2BQ8NHM5 1336 aa9.75□□□□□ -0.85
SEC23IP-203ENST00000446561 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
SEC23IP-203ENST00000446561 ASXL1Q8IXJ9 1541 aa9.74□□□□□ -0.85
SEC23IP-203ENST00000446561 GSE1Q14687 1217 aa9.74□□□□□ -0.85
SEC23IP-203ENST00000446561 WDR43Q15061 677 aaKnown RBP eCLIP9.74□□□□□ -0.85
SEC23IP-203ENST00000446561 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
SEC23IP-203ENST00000446561 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
SEC23IP-203ENST00000446561 NEURL4Q96JN8 1562 aa9.73□□□□□ -0.85
SEC23IP-203ENST00000446561 MADDQ8WXG6 1647 aa9.73□□□□□ -0.85
SEC23IP-203ENST00000446561 SCAPERQ9BY12 1400 aa9.73□□□□□ -0.85
SEC23IP-203ENST00000446561 SYCP2Q9BX26 1530 aa9.72□□□□□ -0.85
SEC23IP-203ENST00000446561 SHROOM2Q13796 1616 aa9.72□□□□□ -0.85
SEC23IP-203ENST00000446561 TESK2Q96S53 571 aa9.72□□□□□ -0.85
SEC23IP-203ENST00000446561 DISP3Q9P2K9 1392 aa9.72□□□□□ -0.85
SEC23IP-203ENST00000446561 ARHGAP5Q13017 1502 aa9.72□□□□□ -0.85
SEC23IP-203ENST00000446561 GOLGA2Q08379 1002 aa9.71□□□□□ -0.86
SEC23IP-203ENST00000446561 AAMPQ13685 434 aa9.71□□□□□ -0.86
SEC23IP-203ENST00000446561 PANK3Q9H999 370 aa9.71□□□□□ -0.86
SEC23IP-203ENST00000446561 ZMYM3Q14202 1370 aa9.71□□□□□ -0.86
SEC23IP-203ENST00000446561 PLA2R1Q13018 1463 aa9.71□□□□□ -0.86
SEC23IP-203ENST00000446561 TTC37Q6PGP7 1564 aa9.71□□□□□ -0.86
SEC23IP-203ENST00000446561 CC2D1BQ5T0F9 858 aaKnown RBP9.7□□□□□ -0.86
SEC23IP-203ENST00000446561 CDCA7LQ96GN5 454 aa9.7□□□□□ -0.86
SEC23IP-203ENST00000446561 KNSTRNQ9Y448 316 aa9.7□□□□□ -0.86
SEC23IP-203ENST00000446561 TRPM2O94759 1503 aa9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 NKTRP30414 1462 aaKnown RBP9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 MYOM1P52179 1685 aa9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 HNRNPMP52272 730 aaKnown RBP eCLIP9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 NFKBIBQ15653 356 aa9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 ZNF521Q96K83 1311 aa9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 SCAF11Q99590 1463 aaKnown RBP9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 WDR7Q9Y4E6 1490 aa9.69□□□□□ -0.86
SEC23IP-203ENST00000446561 MAPK8IP3Q9UPT6 1336 aa9.68□□□□□ -0.86
SEC23IP-203ENST00000446561 BECN1Q14457 450 aa9.68□□□□□ -0.86
SEC23IP-203ENST00000446561 DUSP27Q5VZP5 1158 aa9.68□□□□□ -0.86
SEC23IP-203ENST00000446561 CGNL1Q0VF96 1302 aa9.67□□□□□ -0.86
SEC23IP-203ENST00000446561 PPP2R1AP30153 589 aa9.67□□□□□ -0.86
SEC23IP-203ENST00000446561 TET3O43151 1660 aa9.67□□□□□ -0.86
SEC23IP-203ENST00000446561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 E9PSI1 815 aa9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 PLIN1O60240 522 aa9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 SLFN5Q08AF3 891 aa9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 NBPF1Q3BBV0 1214 aa9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 ADAMTS8Q9UP79 889 aa9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 DEPDC5O75140 1603 aa9.66□□□□□ -0.86
SEC23IP-203ENST00000446561 PLEKHH1Q9ULM0 1364 aa9.65□□□□□ -0.86
SEC23IP-203ENST00000446561 PDE3AQ14432 1141 aa9.65□□□□□ -0.86
SEC23IP-203ENST00000446561 RGL3Q3MIN7 710 aa9.65□□□□□ -0.86
SEC23IP-203ENST00000446561 C8orf34Q49A92 452 aa9.65□□□□□ -0.86
SEC23IP-203ENST00000446561 TRMT2AQ8IZ69 625 aaKnown RBP9.65□□□□□ -0.86
SEC23IP-203ENST00000446561 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
SEC23IP-203ENST00000446561 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
SEC23IP-203ENST00000446561 ARAP3Q8WWN8 1544 aa9.64□□□□□ -0.87
SEC23IP-203ENST00000446561 RTEL1-TNFRSF6BF6WH68 1400 aa9.64□□□□□ -0.87
SEC23IP-203ENST00000446561 ABCC1P33527 1531 aa9.63□□□□□ -0.87
SEC23IP-203ENST00000446561 SENP3-EIF4A1A0A087X0R7 540 aa9.63□□□□□ -0.87
SEC23IP-203ENST00000446561 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
SEC23IP-203ENST00000446561 L1TD1Q5T7N2 865 aaKnown RBP9.63□□□□□ -0.87
SEC23IP-203ENST00000446561 FAM43AQ8N2R8 423 aa9.63□□□□□ -0.87
SEC23IP-203ENST00000446561 KIF1BO60333 1816 aa9.63□□□□□ -0.87
SEC23IP-203ENST00000446561 MYOM2P54296 1465 aa9.62□□□□□ -0.87
SEC23IP-203ENST00000446561 FRAT1Q92837 279 aaPredicted RBP9.62□□□□□ -0.87
SEC23IP-203ENST00000446561 UPF2Q9HAU5 1272 aaKnown RBP9.62□□□□□ -0.87
SEC23IP-203ENST00000446561 PTPRTO14522 1441 aa9.62□□□□□ -0.87
SEC23IP-203ENST00000446561 CLTCL1P53675 1640 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 USP32Q8NFA0 1604 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 ATXN8OSP0DMR3 200 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 FBLN2P98095 1184 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 C20orf194Q5TEA3 1177 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 PMFBP1Q8TBY8 1022 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 RSPH6AQ9H0K4 717 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 IFT172Q9UG01 1749 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 KANK1Q14678 1352 aa9.61□□□□□ -0.87
SEC23IP-203ENST00000446561 MAP3K4Q9Y6R4 1608 aa9.6□□□□□ -0.87
SEC23IP-203ENST00000446561 PLCH2O75038 1416 aa9.6□□□□□ -0.87
SEC23IP-203ENST00000446561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.6□□□□□ -0.87
SEC23IP-203ENST00000446561 POLR3AO14802 1390 aaPredicted RBP9.6□□□□□ -0.87
SEC23IP-203ENST00000446561 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
SEC23IP-203ENST00000446561 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
SEC23IP-203ENST00000446561 CHD1O14646 1710 aa9.59□□□□□ -0.87
SEC23IP-203ENST00000446561 SETBP1Q9Y6X0 1596 aa9.58□□□□□ -0.88
SEC23IP-203ENST00000446561 CENPJQ9HC77 1338 aaPredicted RBP9.58□□□□□ -0.88
SEC23IP-203ENST00000446561 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
SEC23IP-203ENST00000446561 RGS3P49796 1198 aa9.58□□□□□ -0.88
SEC23IP-203ENST00000446561 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
SEC23IP-203ENST00000446561 VWDEQ8N2E2 1590 aa9.58□□□□□ -0.88
SEC23IP-203ENST00000446561 ZC3H13Q5T200 1668 aaKnown RBP9.58□□□□□ -0.88
SEC23IP-203ENST00000446561 ABCA6Q8N139 1617 aa9.57□□□□□ -0.88
SEC23IP-203ENST00000446561 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
SEC23IP-203ENST00000446561 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
SEC23IP-203ENST00000446561 BRPF3Q9ULD4 1205 aa9.57□□□□□ -0.88
SEC23IP-203ENST00000446561 UHRF1BP1LA0JNW5 1464 aa9.57□□□□□ -0.88
SEC23IP-203ENST00000446561 ZFYVE16Q7Z3T8 1539 aa9.56□□□□□ -0.88
SEC23IP-203ENST00000446561 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
SEC23IP-203ENST00000446561 SHPRHQ149N8 1683 aa9.56□□□□□ -0.88
SEC23IP-203ENST00000446561 INO80Q9ULG1 1556 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms