RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RASSF8Q8NHQ8 419 aa10.55□□□□□ -0.72
PTPN3-204ENST00000446349 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPN3-204ENST00000446349 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
PTPN3-204ENST00000446349 C9orf78Q9NZ63 289 aaPredicted RBP10.55□□□□□ -0.72
PTPN3-204ENST00000446349 VPS37DQ86XT2 251 aa10.54□□□□□ -0.72
PTPN3-204ENST00000446349 NOP58Q9Y2X3 529 aaKnown RBP10.54□□□□□ -0.72
PTPN3-204ENST00000446349 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
PTPN3-204ENST00000446349 MSNP26038 577 aaKnown RBP10.54□□□□□ -0.72
PTPN3-204ENST00000446349 TPM2P07951 284 aa10.54□□□□□ -0.72
PTPN3-204ENST00000446349 RPGRIP1LQ68CZ1 1315 aa10.54□□□□□ -0.72
PTPN3-204ENST00000446349 LRRC9Q6ZRR7 1453 aa10.54□□□□□ -0.72
PTPN3-204ENST00000446349 SYNJ1O43426 1573 aa10.53□□□□□ -0.72
PTPN3-204ENST00000446349 CCDC47Q96A33 483 aaKnown RBP10.53□□□□□ -0.72
PTPN3-204ENST00000446349 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
PTPN3-204ENST00000446349 MINK1Q8N4C8 1332 aaPredicted RBP10.53□□□□□ -0.72
PTPN3-204ENST00000446349 ZKSCAN2Q63HK3 967 aa10.53□□□□□ -0.72
PTPN3-204ENST00000446349 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.72
PTPN3-204ENST00000446349 PANK3Q9H999 370 aa10.52□□□□□ -0.72
PTPN3-204ENST00000446349 GNAI1P63096 354 aa10.52□□□□□ -0.73
PTPN3-204ENST00000446349 DAPK1P53355 1430 aa10.52□□□□□ -0.73
PTPN3-204ENST00000446349 ST20-MTHFSA0A0A6YYL1 179 aa10.52□□□□□ -0.73
PTPN3-204ENST00000446349 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
PTPN3-204ENST00000446349 ANKLE2Q86XL3 938 aa10.51□□□□□ -0.73
PTPN3-204ENST00000446349 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
PTPN3-204ENST00000446349 GAS2L2Q8NHY3 880 aa10.51□□□□□ -0.73
PTPN3-204ENST00000446349 APBB1O00213 710 aa10.51□□□□□ -0.73
PTPN3-204ENST00000446349 MFAP1P55081 439 aaKnown RBP10.51□□□□□ -0.73
PTPN3-204ENST00000446349 NUTM2DQ5VT03 806 aaPredicted RBP10.51□□□□□ -0.73
PTPN3-204ENST00000446349 HOOK1Q9UJC3 728 aaKnown RBP10.51□□□□□ -0.73
PTPN3-204ENST00000446349 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
PTPN3-204ENST00000446349 TRDNQ13061 729 aa10.51□□□□□ -0.73
PTPN3-204ENST00000446349 NCOA2Q15596 1464 aa10.5□□□□□ -0.73
PTPN3-204ENST00000446349 TOMM22Q9NS69 142 aa10.5□□□□□ -0.73
PTPN3-204ENST00000446349 TSR1Q2NL82 804 aaKnown RBP10.5□□□□□ -0.73
PTPN3-204ENST00000446349 REC8O95072 547 aa10.5□□□□□ -0.73
PTPN3-204ENST00000446349 TROQ12816 1431 aaPredicted RBP10.5□□□□□ -0.73
PTPN3-204ENST00000446349 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 TRIM29Q14134 588 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 SF3A1Q15459 793 aaKnown RBP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 DMRT2Q9Y5R5 561 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 ZKSCAN1P17029 563 aaPredicted RBP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 TXNDC2Q86VQ3 553 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 ERICH2A1L162 156 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 PPP6R1Q9UPN7 881 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 ERC2O15083 957 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 RUNDC1Q96C34 613 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 IQGAP2Q13576 1575 aa10.49□□□□□ -0.73
PTPN3-204ENST00000446349 G3BP1Q13283 466 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 CENPQQ7L2Z9 268 aaPredicted RBP10.49□□□□□ -0.73
PTPN3-204ENST00000446349 PNISRQ8TF01 805 aaKnown RBP10.48□□□□□ -0.73
PTPN3-204ENST00000446349 DIAPH3Q9NSV4 1193 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 TPRNQ4KMQ1 711 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 VPS53Q5VIR6 699 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 PROSER2Q86WR7 435 aaPredicted RBP10.48□□□□□ -0.73
PTPN3-204ENST00000446349 FAM184AQ8NB25 1140 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 TPM1P09493 284 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 KIF14Q15058 1648 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 CCDC7Q96M83 1385 aa10.48□□□□□ -0.73
PTPN3-204ENST00000446349 PHF23Q9BUL5 403 aaPredicted RBP10.48□□□□□ -0.73
PTPN3-204ENST00000446349 H3BQV1 296 aa10.47□□□□□ -0.73
PTPN3-204ENST00000446349 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
PTPN3-204ENST00000446349 B4GALNT3Q6L9W6 998 aa10.47□□□□□ -0.73
PTPN3-204ENST00000446349 KIF6Q6ZMV9 814 aa10.47□□□□□ -0.73
PTPN3-204ENST00000446349 CNTLNQ9NXG0 1405 aa10.47□□□□□ -0.73
PTPN3-204ENST00000446349 SYTL4Q96C24 671 aaPredicted RBP10.47□□□□□ -0.73
PTPN3-204ENST00000446349 ANKRD30BQ9BXX2 1392 aa10.47□□□□□ -0.73
PTPN3-204ENST00000446349 C9orf84Q5VXU9 1444 aa10.47□□□□□ -0.73
PTPN3-204ENST00000446349 IFIT2P09913 472 aaKnown RBP10.47□□□□□ -0.73
PTPN3-204ENST00000446349 TPM3P06753 285 aa10.46□□□□□ -0.73
PTPN3-204ENST00000446349 ANKRD20A12PQ8NF67 263 aa10.46□□□□□ -0.74
PTPN3-204ENST00000446349 POLA1P09884 1462 aaPredicted RBP10.45□□□□□ -0.74
PTPN3-204ENST00000446349 TATP17735 454 aaPredicted RBP10.45□□□□□ -0.74
PTPN3-204ENST00000446349 SLC3A2P08195 630 aaKnown RBP10.45□□□□□ -0.74
PTPN3-204ENST00000446349 TPD52L1Q16890 204 aaPredicted RBP10.44□□□□□ -0.74
PTPN3-204ENST00000446349 CCDC141Q6ZP82 1450 aa10.44□□□□□ -0.74
PTPN3-204ENST00000446349 NINLQ9Y2I6 1382 aa10.44□□□□□ -0.74
PTPN3-204ENST00000446349 TSPYL4Q9UJ04 414 aa10.44□□□□□ -0.74
PTPN3-204ENST00000446349 NLRP2Q9NX02 1062 aa10.44□□□□□ -0.74
PTPN3-204ENST00000446349 HIP1O00291 1037 aa10.44□□□□□ -0.74
PTPN3-204ENST00000446349 NLRP6P59044 892 aa10.44□□□□□ -0.74
PTPN3-204ENST00000446349 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
PTPN3-204ENST00000446349 XBP1P17861 261 aa10.43□□□□□ -0.74
PTPN3-204ENST00000446349 RIPK4P57078 832 aa10.43□□□□□ -0.74
PTPN3-204ENST00000446349 CCDC43Q96MW1 224 aaKnown RBP10.43□□□□□ -0.74
PTPN3-204ENST00000446349 CCDC30Q5VVM6 783 aa10.43□□□□□ -0.74
PTPN3-204ENST00000446349 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
PTPN3-204ENST00000446349 CCDC146Q8IYE0 955 aa10.43□□□□□ -0.74
PTPN3-204ENST00000446349 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
PTPN3-204ENST00000446349 GNL3LQ9NVN8 582 aaKnown RBP10.43□□□□□ -0.74
PTPN3-204ENST00000446349 ZBED9Q6R2W3 1325 aa10.43□□□□□ -0.74
PTPN3-204ENST00000446349 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
PTPN3-204ENST00000446349 BRMS1Q9HCU9 246 aa10.42□□□□□ -0.74
PTPN3-204ENST00000446349 ATAD2Q6PL18 1390 aa10.42□□□□□ -0.74
PTPN3-204ENST00000446349 ERC1Q8IUD2 1116 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms