RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 CENPQQ7L2Z9 268 aaPredicted RBP16.19■□□□□ 0.18
DDR1-238ENST00000446312 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
DDR1-238ENST00000446312 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.18■□□□□ 0.18
DDR1-238ENST00000446312 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
DDR1-238ENST00000446312 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
DDR1-238ENST00000446312 PRAG1Q86YV5 1406 aa16.16■□□□□ 0.18
DDR1-238ENST00000446312 TMEM132EQ6IEE7 984 aa16.15■□□□□ 0.18
DDR1-238ENST00000446312 SLFN5Q08AF3 891 aa16.14■□□□□ 0.17
DDR1-238ENST00000446312 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
DDR1-238ENST00000446312 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
DDR1-238ENST00000446312 KDM2BQ8NHM5 1336 aa16.13■□□□□ 0.17
DDR1-238ENST00000446312 PTPRGP23470 1445 aa16.13■□□□□ 0.17
DDR1-238ENST00000446312 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
DDR1-238ENST00000446312 KIF3BO15066 747 aa16.12■□□□□ 0.17
DDR1-238ENST00000446312 RLBP1P12271 317 aa16.11■□□□□ 0.17
DDR1-238ENST00000446312 PDE4CQ08493 712 aa16.11■□□□□ 0.17
DDR1-238ENST00000446312 A2MP01023 1474 aa16.11■□□□□ 0.17
DDR1-238ENST00000446312 UHRF1BP1Q6BDS2 1440 aa16.11■□□□□ 0.17
DDR1-238ENST00000446312 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
DDR1-238ENST00000446312 CHD1O14646 1710 aa16.1■□□□□ 0.17
DDR1-238ENST00000446312 MFAP1P55081 439 aaKnown RBP16.1■□□□□ 0.17
DDR1-238ENST00000446312 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
DDR1-238ENST00000446312 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
DDR1-238ENST00000446312 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
DDR1-238ENST00000446312 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
DDR1-238ENST00000446312 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
DDR1-238ENST00000446312 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
DDR1-238ENST00000446312 CDC42BPBQ9Y5S2 1711 aa16.09■□□□□ 0.17
DDR1-238ENST00000446312 PLA2R1Q13018 1463 aa16.09■□□□□ 0.17
DDR1-238ENST00000446312 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
DDR1-238ENST00000446312 SAMD9LQ8IVG5 1584 aa16.08■□□□□ 0.16
DDR1-238ENST00000446312 PCDHB15Q9Y5E8 787 aa16.08■□□□□ 0.16
DDR1-238ENST00000446312 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
DDR1-238ENST00000446312 STK26Q9P289 416 aa16.07■□□□□ 0.16
DDR1-238ENST00000446312 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
DDR1-238ENST00000446312 POLR1AO95602 1720 aaPredicted RBP16.07■□□□□ 0.16
DDR1-238ENST00000446312 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
DDR1-238ENST00000446312 HSP90AA2PQ14568 343 aaPredicted RBP16.06■□□□□ 0.16
DDR1-238ENST00000446312 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
DDR1-238ENST00000446312 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.16
DDR1-238ENST00000446312 FBLN1P23142 703 aa16.05■□□□□ 0.16
DDR1-238ENST00000446312 ADGRF5Q8IZF2 1346 aa16.05■□□□□ 0.16
DDR1-238ENST00000446312 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
DDR1-238ENST00000446312 TCP11L2Q8N4U5 519 aa16.05■□□□□ 0.16
DDR1-238ENST00000446312 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
DDR1-238ENST00000446312 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
DDR1-238ENST00000446312 GGT6Q6P531 493 aa16.04■□□□□ 0.16
DDR1-238ENST00000446312 WWC1Q8IX03 1113 aa16.04■□□□□ 0.16
DDR1-238ENST00000446312 TTC37Q6PGP7 1564 aa16.02■□□□□ 0.16
DDR1-238ENST00000446312 ELL2O00472 640 aaPredicted RBP16.02■□□□□ 0.16
DDR1-238ENST00000446312 PREX2Q70Z35 1606 aa16.02■□□□□ 0.16
DDR1-238ENST00000446312 ARHGEF5Q12774 1597 aa16.02■□□□□ 0.16
DDR1-238ENST00000446312 MTHFSP49914 203 aa16.02■□□□□ 0.16
DDR1-238ENST00000446312 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.15
DDR1-238ENST00000446312 COL17A1Q9UMD9 1497 aaPredicted RBP16.02■□□□□ 0.15
DDR1-238ENST00000446312 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.15
DDR1-238ENST00000446312 E9PSI1 815 aa16.01■□□□□ 0.15
DDR1-238ENST00000446312 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
DDR1-238ENST00000446312 KDM5DQ9BY66 1539 aa16.01■□□□□ 0.15
DDR1-238ENST00000446312 SPAG9O60271 1321 aaKnown RBP16.01■□□□□ 0.15
DDR1-238ENST00000446312 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
DDR1-238ENST00000446312 BLMP54132 1417 aaPredicted RBP16■□□□□ 0.15
DDR1-238ENST00000446312 CCDC141Q6ZP82 1450 aa16■□□□□ 0.15
DDR1-238ENST00000446312 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
DDR1-238ENST00000446312 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
DDR1-238ENST00000446312 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.159e-7■■■□□ 17.5
DDR1-238ENST00000446312 USP19O94966 1318 aa15.99■□□□□ 0.15
DDR1-238ENST00000446312 SHROOM2Q13796 1616 aa15.99■□□□□ 0.15
DDR1-238ENST00000446312 BECN1Q14457 450 aa15.97■□□□□ 0.15
DDR1-238ENST00000446312 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
DDR1-238ENST00000446312 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
DDR1-238ENST00000446312 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
DDR1-238ENST00000446312 TBC1D2Q9BYX2 928 aa15.97■□□□□ 0.15
DDR1-238ENST00000446312 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
DDR1-238ENST00000446312 FGD1P98174 961 aa15.96■□□□□ 0.15
DDR1-238ENST00000446312 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.15
DDR1-238ENST00000446312 GGNBP2Q9H3C7 697 aa15.96■□□□□ 0.15
DDR1-238ENST00000446312 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.14
DDR1-238ENST00000446312 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
DDR1-238ENST00000446312 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
DDR1-238ENST00000446312 APBB1O00213 710 aa15.95■□□□□ 0.14
DDR1-238ENST00000446312 TPRNQ4KMQ1 711 aa15.95■□□□□ 0.14
DDR1-238ENST00000446312 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
DDR1-238ENST00000446312 RRAGDQ9NQL2 400 aaPredicted RBP15.94■□□□□ 0.14
DDR1-238ENST00000446312 ARHGEF12Q9NZN5 1544 aa15.94■□□□□ 0.14
DDR1-238ENST00000446312 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
DDR1-238ENST00000446312 HSP90AA1P07900 732 aaKnown RBP15.94■□□□□ 0.14
DDR1-238ENST00000446312 LNPKQ9C0E8 428 aa15.94■□□□□ 0.14
DDR1-238ENST00000446312 BCL11BQ9C0K0 894 aaPredicted RBP15.94■□□□□ 0.14
DDR1-238ENST00000446312 WDR7Q9Y4E6 1490 aa15.94■□□□□ 0.14
DDR1-238ENST00000446312 AAMPQ13685 434 aa15.93■□□□□ 0.14
DDR1-238ENST00000446312 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
DDR1-238ENST00000446312 TRAPPC8Q9Y2L5 1435 aa15.92■□□□□ 0.14
DDR1-238ENST00000446312 PDIA4P13667 645 aaKnown RBP15.92■□□□□ 0.14
DDR1-238ENST00000446312 THUMPD2Q9BTF0 503 aaKnown RBP15.92■□□□□ 0.14
DDR1-238ENST00000446312 ABCC2Q92887 1545 aa15.92■□□□□ 0.14
DDR1-238ENST00000446312 CGNL1Q0VF96 1302 aa15.91■□□□□ 0.14
DDR1-238ENST00000446312 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
DDR1-238ENST00000446312 FAM43AQ8N2R8 423 aa15.9■□□□□ 0.14
DDR1-238ENST00000446312 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms