RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
SGCE-206ENST00000445866 RIMS2Q9UQ26 1411 aa24.95■■□□□ 1.58
SGCE-206ENST00000445866 ADGRF5Q8IZF2 1346 aa24.93■■□□□ 1.58
SGCE-206ENST00000445866 BCANQ96GW7 911 aa24.93■■□□□ 1.58
SGCE-206ENST00000445866 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
SGCE-206ENST00000445866 SETD1BQ9UPS6 1966 aaKnown RBP24.92■■□□□ 1.58
SGCE-206ENST00000445866 TMEM131LA2VDJ0 1609 aa24.91■■□□□ 1.58
SGCE-206ENST00000445866 CEP170BQ9Y4F5 1589 aaPredicted RBP24.91■■□□□ 1.58
SGCE-206ENST00000445866 MYO3AQ8NEV4 1616 aa24.89■■□□□ 1.57
SGCE-206ENST00000445866 NBPF8Q3BBV2 869 aa24.88■■□□□ 1.57
SGCE-206ENST00000445866 NCKAP5LQ9HCH0 1330 aa24.88■■□□□ 1.57
SGCE-206ENST00000445866 NEURL4Q96JN8 1562 aa24.88■■□□□ 1.57
SGCE-206ENST00000445866 ZFYVE9O95405 1425 aa24.87■■□□□ 1.57
SGCE-206ENST00000445866 LMTK3Q96Q04 1460 aa24.84■■□□□ 1.57
SGCE-206ENST00000445866 ARHGAP23Q9P227 1491 aa24.83■■□□□ 1.57
SGCE-206ENST00000445866 CFAP70Q5T0N1 1121 aa24.82■■□□□ 1.56
SGCE-206ENST00000445866 KIF1BO60333 1816 aa24.82■■□□□ 1.56
SGCE-206ENST00000445866 SLIT1O75093 1534 aa24.81■■□□□ 1.56
SGCE-206ENST00000445866 C14orf93Q9H972 538 aaKnown RBP24.81■■□□□ 1.56
SGCE-206ENST00000445866 UBR1Q8IWV7 1749 aa24.81■■□□□ 1.56
SGCE-206ENST00000445866 NEXMIFQ5QGS0 1516 aa24.79■■□□□ 1.56
SGCE-206ENST00000445866 SLC26A8Q96RN1 970 aa24.79■■□□□ 1.56
SGCE-206ENST00000445866 SCAF11Q99590 1463 aaKnown RBP24.79■■□□□ 1.56
SGCE-206ENST00000445866 PLEKHG1Q9ULL1 1385 aa24.78■■□□□ 1.56
SGCE-206ENST00000445866 PRAG1Q86YV5 1406 aa24.78■■□□□ 1.56
SGCE-206ENST00000445866 NBPF1Q3BBV0 1214 aa24.77■■□□□ 1.56
SGCE-206ENST00000445866 MYOM2P54296 1465 aa24.77■■□□□ 1.56
SGCE-206ENST00000445866 KDM5AP29375 1690 aaKnown RBP24.76■■□□□ 1.55
SGCE-206ENST00000445866 TMEM132EQ6IEE7 984 aa24.75■■□□□ 1.55
SGCE-206ENST00000445866 ZNF142P52746 1687 aaPredicted RBP24.74■■□□□ 1.55
SGCE-206ENST00000445866 TBX22Q9Y458 520 aa24.74■■□□□ 1.55
SGCE-206ENST00000445866 NRXN1Q9ULB1 1477 aa24.73■■□□□ 1.55
SGCE-206ENST00000445866 PIK3C2GO75747 1445 aa24.72■■□□□ 1.55
SGCE-206ENST00000445866 NPHP4O75161 1426 aaPredicted RBP24.71■■□□□ 1.55
SGCE-206ENST00000445866 CARD11Q9BXL7 1154 aa24.7■■□□□ 1.54
SGCE-206ENST00000445866 DMRT2Q9Y5R5 561 aa24.69■■□□□ 1.54
SGCE-206ENST00000445866 ROCK2O75116 1388 aaKnown RBP24.69■■□□□ 1.54
SGCE-206ENST00000445866 STK26Q9P289 416 aa24.67■■□□□ 1.54
SGCE-206ENST00000445866 MYO5BQ9ULV0 1848 aa24.67■■□□□ 1.54
SGCE-206ENST00000445866 ADAMTS13Q76LX8 1427 aa24.65■■□□□ 1.54
SGCE-206ENST00000445866 MED14O60244 1454 aa24.65■■□□□ 1.54
SGCE-206ENST00000445866 METP08581 1390 aa24.64■■□□□ 1.54
SGCE-206ENST00000445866 PPLO60437 1756 aa24.63■■□□□ 1.53
SGCE-206ENST00000445866 TRAK1Q9UPV9 953 aa24.62■■□□□ 1.53
SGCE-206ENST00000445866 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
SGCE-206ENST00000445866 ALKQ9UM73 1620 aa24.59■■□□□ 1.53
SGCE-206ENST00000445866 RALGAPBQ86X10 1494 aa24.58■■□□□ 1.53
SGCE-206ENST00000445866 SETBP1Q9Y6X0 1596 aa24.58■■□□□ 1.53
SGCE-206ENST00000445866 GPRASP1Q5JY77 1395 aa24.58■■□□□ 1.52
SGCE-206ENST00000445866 IFT172Q9UG01 1749 aa24.58■■□□□ 1.52
SGCE-206ENST00000445866 KCNA6P17658 529 aa24.56■■□□□ 1.52
SGCE-206ENST00000445866 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
SGCE-206ENST00000445866 LRPPRCP42704 1394 aaKnown RBP24.55■■□□□ 1.52
SGCE-206ENST00000445866 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
SGCE-206ENST00000445866 YTHDC2Q9H6S0 1430 aaKnown RBP24.54■■□□□ 1.52
SGCE-206ENST00000445866 ABCC11Q96J66 1382 aa24.53■■□□□ 1.52
SGCE-206ENST00000445866 POGKQ9P215 609 aa24.53■■□□□ 1.52
SGCE-206ENST00000445866 HSPA5P11021 654 aaKnown RBP24.51■■□□□ 1.51
SGCE-206ENST00000445866 PTPRUQ92729 1446 aa24.5■■□□□ 1.51
SGCE-206ENST00000445866 ST20-MTHFSA0A0A6YYL1 179 aa24.5■■□□□ 1.51
SGCE-206ENST00000445866 WAPLQ7Z5K2 1190 aa24.5■■□□□ 1.51
SGCE-206ENST00000445866 SIRT1Q96EB6 747 aa24.5■■□□□ 1.51
SGCE-206ENST00000445866 PRAM1Q96QH2 718 aa24.5■■□□□ 1.51
SGCE-206ENST00000445866 HIRIP3Q9BW71 556 aaPredicted RBP24.5■■□□□ 1.51
SGCE-206ENST00000445866 USP47Q96K76 1375 aa24.49■■□□□ 1.51
SGCE-206ENST00000445866 ADGRB1O14514 1584 aa24.49■■□□□ 1.51
SGCE-206ENST00000445866 SAFB2Q14151 953 aaKnown RBP eCLIP24.49■■□□□ 1.51
SGCE-206ENST00000445866 NRXN3Q9Y4C0 1643 aa24.49■■□□□ 1.51
SGCE-206ENST00000445866 PROSER2Q86WR7 435 aaPredicted RBP24.46■■□□□ 1.51
SGCE-206ENST00000445866 ZNF335Q9H4Z2 1342 aaPredicted RBP24.46■■□□□ 1.51
SGCE-206ENST00000445866 TRPM1Q7Z4N2 1603 aa24.46■■□□□ 1.51
SGCE-206ENST00000445866 DIP2AQ14689 1571 aa24.46■■□□□ 1.51
SGCE-206ENST00000445866 STRCQ7RTU9 1775 aa24.45■■□□□ 1.5
SGCE-206ENST00000445866 IQGAP1P46940 1657 aa24.45■■□□□ 1.5
SGCE-206ENST00000445866 CENPJQ9HC77 1338 aaPredicted RBP24.45■■□□□ 1.5
SGCE-206ENST00000445866 ASXL1Q8IXJ9 1541 aa24.44■■□□□ 1.5
SGCE-206ENST00000445866 EIF3AQ14152 1382 aaKnown RBP24.44■■□□□ 1.5
SGCE-206ENST00000445866 ROBO2Q9HCK4 1378 aa24.44■■□□□ 1.5
SGCE-206ENST00000445866 RBM33Q96EV2 1170 aaKnown RBP24.43■■□□□ 1.5
SGCE-206ENST00000445866 KIAA1210Q9ULL0 1709 aa24.42■■□□□ 1.5
SGCE-206ENST00000445866 POLR1AO95602 1720 aaPredicted RBP24.41■■□□□ 1.5
SGCE-206ENST00000445866 LAMC1P11047 1609 aa24.41■■□□□ 1.5
SGCE-206ENST00000445866 PLEKHH1Q9ULM0 1364 aa24.39■■□□□ 1.5
SGCE-206ENST00000445866 TECPR2O15040 1411 aa24.39■■□□□ 1.49
SGCE-206ENST00000445866 MINK1Q8N4C8 1332 aaPredicted RBP24.38■■□□□ 1.49
SGCE-206ENST00000445866 C14orf37Q86TY3 774 aa24.38■■□□□ 1.49
SGCE-206ENST00000445866 FAM135BQ49AJ0 1406 aa24.38■■□□□ 1.49
SGCE-206ENST00000445866 TESK2Q96S53 571 aa24.37■■□□□ 1.49
SGCE-206ENST00000445866 SLC24A1O60721 1099 aa24.37■■□□□ 1.49
SGCE-206ENST00000445866 PTCH1Q13635 1447 aa24.33■■□□□ 1.49
SGCE-206ENST00000445866 SETD1AO15047 1707 aaKnown RBP24.33■■□□□ 1.49
SGCE-206ENST00000445866 TMF1P82094 1093 aa24.33■■□□□ 1.49
SGCE-206ENST00000445866 DLC1Q96QB1 1528 aa24.32■■□□□ 1.48
SGCE-206ENST00000445866 TMEM94Q12767 1356 aa24.32■■□□□ 1.48
SGCE-206ENST00000445866 ZNF316A6NFI3 1004 aaPredicted RBP24.29■■□□□ 1.48
SGCE-206ENST00000445866 CDK19Q9BWU1 502 aa24.29■■□□□ 1.48
SGCE-206ENST00000445866 C19orf44Q9H6X5 657 aa24.29■■□□□ 1.48
SGCE-206ENST00000445866 EVC2Q86UK5 1308 aa24.29■■□□□ 1.48
SGCE-206ENST00000445866 C11orf95C9JLR9 678 aaPredicted RBP24.28■■□□□ 1.48
SGCE-206ENST00000445866 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms