RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 FAM43AQ8N2R8 423 aa15.18■□□□□ 0.02
APLF-203ENST00000445692 GBP4Q96PP9 640 aa15.18■□□□□ 0.02
APLF-203ENST00000445692 IGHDP01880 384 aa15.18■□□□□ 0.02
APLF-203ENST00000445692 MAP3K1Q13233 1512 aa15.18■□□□□ 0.02
APLF-203ENST00000445692 C22orf23Q9BZE7 217 aa15.18■□□□□ 0.02
APLF-203ENST00000445692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.18■□□□□ 0.02
APLF-203ENST00000445692 SRPK2P78362 688 aaKnown RBP15.17■□□□□ 0.02
APLF-203ENST00000445692 PANK2Q9BZ23 570 aa15.17■□□□□ 0.02
APLF-203ENST00000445692 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
APLF-203ENST00000445692 SEC24BO95487 1268 aa15.17■□□□□ 0.02
APLF-203ENST00000445692 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
APLF-203ENST00000445692 ZMYND15Q9H091 742 aa15.16■□□□□ 0.02
APLF-203ENST00000445692 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
APLF-203ENST00000445692 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
APLF-203ENST00000445692 KIAA0556O60303 1618 aa15.15■□□□□ 0.02
APLF-203ENST00000445692 CHMP5Q9NZZ3 219 aa15.15■□□□□ 0.02
APLF-203ENST00000445692 RBM10P98175 930 aaKnown RBP15.15■□□□□ 0.02
APLF-203ENST00000445692 MPNDQ8N594 471 aa15.15■□□□□ 0.02
APLF-203ENST00000445692 GGT6Q6P531 493 aa15.14■□□□□ 0.01
APLF-203ENST00000445692 TSR2Q969E8 191 aaKnown RBP15.14■□□□□ 0.01
APLF-203ENST00000445692 KIAA1107Q9UPP5 1409 aa15.14■□□□□ 0.01
APLF-203ENST00000445692 C8orf34Q49A92 452 aa15.14■□□□□ 0.01
APLF-203ENST00000445692 DUSP27Q5VZP5 1158 aa15.14■□□□□ 0.01
APLF-203ENST00000445692 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
APLF-203ENST00000445692 DAPK1P53355 1430 aa15.13■□□□□ 0.01
APLF-203ENST00000445692 KIF3BO15066 747 aa15.13■□□□□ 0.01
APLF-203ENST00000445692 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
APLF-203ENST00000445692 TNNQ9UQP3 1299 aa15.12■□□□□ 0.01
APLF-203ENST00000445692 SAMD9Q5K651 1589 aa15.12■□□□□ 0.01
APLF-203ENST00000445692 ADCY10Q96PN6 1610 aa15.12■□□□□ 0.01
APLF-203ENST00000445692 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
APLF-203ENST00000445692 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
APLF-203ENST00000445692 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
APLF-203ENST00000445692 SLFN5Q08AF3 891 aa15.1■□□□□ 0.01
APLF-203ENST00000445692 DZIP1LQ8IYY4 767 aaKnown RBP15.1■□□□□ 0.01
APLF-203ENST00000445692 C1orf115Q9H7X2 142 aa15.1■□□□□ 0.01
APLF-203ENST00000445692 MCM4P33991 863 aa15.1■□□□□ 0.01
APLF-203ENST00000445692 CFAP70Q5T0N1 1121 aa15.1■□□□□ 0.01
APLF-203ENST00000445692 TBC1D2Q9BYX2 928 aa15.1■□□□□ 0.01
APLF-203ENST00000445692 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
APLF-203ENST00000445692 ABCC5O15440 1437 aa15.09■□□□□ 0.01
APLF-203ENST00000445692 DDX11L8A8MPP1 907 aa15.09■□□□□ 0.01
APLF-203ENST00000445692 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0.01
APLF-203ENST00000445692 WASHC2CQ9Y4E1 1318 aa15.08■□□□□ 0
APLF-203ENST00000445692 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
APLF-203ENST00000445692 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0
APLF-203ENST00000445692 MIA2Q96PC5 1412 aa15.08■□□□□ 0
APLF-203ENST00000445692 RRAGDQ9NQL2 400 aaPredicted RBP15.07■□□□□ 0
APLF-203ENST00000445692 MTHFSP49914 203 aa15.07■□□□□ 0
APLF-203ENST00000445692 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
APLF-203ENST00000445692 RNF214Q8ND24 703 aa15.07■□□□□ 0
APLF-203ENST00000445692 RNF123Q5XPI4 1314 aa15.06■□□□□ 0
APLF-203ENST00000445692 R3HCC1Q9Y3T6 440 aaKnown RBP15.06■□□□□ 0
APLF-203ENST00000445692 EHBP1L1Q8N3D4 1523 aa15.06■□□□□ 0
APLF-203ENST00000445692 SLC12A5Q9H2X9 1139 aa15.06■□□□□ 0
APLF-203ENST00000445692 MCTP1Q6DN14 999 aa15.05■□□□□ 0
APLF-203ENST00000445692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ 0
APLF-203ENST00000445692 MRE11P49959 708 aa15.05■□□□□ -0
APLF-203ENST00000445692 IPO8O15397 1037 aaKnown RBP15.05■□□□□ -0
APLF-203ENST00000445692 DISP3Q9P2K9 1392 aa15.04■□□□□ -0
APLF-203ENST00000445692 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
APLF-203ENST00000445692 GRPEL1Q9HAV7 217 aa15.04■□□□□ -0
APLF-203ENST00000445692 XRCC6P12956 609 aaKnown RBP eCLIP15.03■□□□□ -0
APLF-203ENST00000445692 CASC1Q6TDU7 716 aa15.03■□□□□ -0
APLF-203ENST00000445692 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
APLF-203ENST00000445692 EFCAB5A4FU69 1503 aa15.03■□□□□ -0
APLF-203ENST00000445692 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
APLF-203ENST00000445692 SUPT6HQ7KZ85 1726 aaKnown RBP15.03■□□□□ -0
APLF-203ENST00000445692 ESPNB1AK53 854 aa15.03■□□□□ -0
APLF-203ENST00000445692 GGNBP2Q9H3C7 697 aa15.02■□□□□ -0
APLF-203ENST00000445692 RUNDC1Q96C34 613 aa15.02□□□□□ -0.01
APLF-203ENST00000445692 CAVIN1Q6NZI2 390 aaKnown RBP15.01□□□□□ -0.01
APLF-203ENST00000445692 PCDHB15Q9Y5E8 787 aa15.01□□□□□ -0.01
APLF-203ENST00000445692 PLEKHH1Q9ULM0 1364 aa15.01□□□□□ -0.01
APLF-203ENST00000445692 PTPRGP23470 1445 aa15.01□□□□□ -0.01
APLF-203ENST00000445692 CDK11BP21127 795 aaKnown RBP15.01□□□□□ -0.01
APLF-203ENST00000445692 SLC4A10Q6U841 1118 aa15.01□□□□□ -0.01
APLF-203ENST00000445692 WWC1Q8IX03 1113 aa15.01□□□□□ -0.01
APLF-203ENST00000445692 NASPP49321 788 aaPredicted RBP15.01□□□□□ -0.01
APLF-203ENST00000445692 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
APLF-203ENST00000445692 PDE3AQ14432 1141 aa15□□□□□ -0.01
APLF-203ENST00000445692 RIPK4P57078 832 aa15□□□□□ -0.01
APLF-203ENST00000445692 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
APLF-203ENST00000445692 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
APLF-203ENST00000445692 ABCC2Q92887 1545 aa14.98□□□□□ -0.01
APLF-203ENST00000445692 HMOX1P09601 288 aa14.98□□□□□ -0.01
APLF-203ENST00000445692 ABCA8O94911 1581 aa14.98□□□□□ -0.01
APLF-203ENST00000445692 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
APLF-203ENST00000445692 SPAG9O60271 1321 aaKnown RBP14.97□□□□□ -0.01
APLF-203ENST00000445692 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
APLF-203ENST00000445692 EFCAB2Q5VUJ9 269 aa14.97□□□□□ -0.01
APLF-203ENST00000445692 AFAP1Q8N556 730 aa14.97□□□□□ -0.01
APLF-203ENST00000445692 DDX19BQ9UMR2 479 aa14.97□□□□□ -0.01
APLF-203ENST00000445692 RLBP1P12271 317 aa14.97□□□□□ -0.01
APLF-203ENST00000445692 NOB1Q9ULX3 412 aaKnown RBP14.97□□□□□ -0.01
APLF-203ENST00000445692 C9orf84Q5VXU9 1444 aa14.96□□□□□ -0.01
APLF-203ENST00000445692 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.01
APLF-203ENST00000445692 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
APLF-203ENST00000445692 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.01
APLF-203ENST00000445692 CABP2Q9NPB3 220 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms