RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SAFB2Q14151 953 aaKnown RBP eCLIP22.62■■□□□ 1.21
LAPTM4B-201ENST00000445593 FRMPD1Q5SYB0 1578 aa22.61■■□□□ 1.21
LAPTM4B-201ENST00000445593 SCAF11Q99590 1463 aaKnown RBP22.61■■□□□ 1.21
LAPTM4B-201ENST00000445593 BRD4O60885 1362 aaPredicted RBP22.61■■□□□ 1.21
LAPTM4B-201ENST00000445593 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
LAPTM4B-201ENST00000445593 HECW2Q9P2P5 1572 aa22.6■■□□□ 1.21
LAPTM4B-201ENST00000445593 PARD3Q8TEW0 1356 aa22.59■■□□□ 1.21
LAPTM4B-201ENST00000445593 ABCA6Q8N139 1617 aa22.59■■□□□ 1.21
LAPTM4B-201ENST00000445593 MLH3Q9UHC1 1453 aa22.58■■□□□ 1.21
LAPTM4B-201ENST00000445593 NUDCQ9Y266 331 aa22.56■■□□□ 1.2
LAPTM4B-201ENST00000445593 RNF17Q9BXT8 1623 aaKnown RBP22.56■■□□□ 1.2
LAPTM4B-201ENST00000445593 EIF3AQ14152 1382 aaKnown RBP22.54■■□□□ 1.2
LAPTM4B-201ENST00000445593 MROH2AA6NES4 1674 aa22.54■■□□□ 1.2
LAPTM4B-201ENST00000445593 FBXO31Q5XUX0 539 aaPredicted RBP22.54■■□□□ 1.2
LAPTM4B-201ENST00000445593 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
LAPTM4B-201ENST00000445593 STK26Q9P289 416 aa22.54■■□□□ 1.2
LAPTM4B-201ENST00000445593 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
LAPTM4B-201ENST00000445593 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
LAPTM4B-201ENST00000445593 LAMC1P11047 1609 aa22.53■■□□□ 1.2
LAPTM4B-201ENST00000445593 CFAP74Q9C0B2 1584 aa22.53■■□□□ 1.2
LAPTM4B-201ENST00000445593 IDI1Q13907 227 aa22.52■■□□□ 1.2
LAPTM4B-201ENST00000445593 TSPOAP1O95153 1857 aa22.52■■□□□ 1.2
LAPTM4B-201ENST00000445593 CDCA7LQ96GN5 454 aa22.52■■□□□ 1.2
LAPTM4B-201ENST00000445593 NEO1Q92859 1461 aa22.51■■□□□ 1.19
LAPTM4B-201ENST00000445593 KIF1BO60333 1816 aa22.51■■□□□ 1.19
LAPTM4B-201ENST00000445593 STAC3Q96MF2 364 aa22.51■■□□□ 1.19
LAPTM4B-201ENST00000445593 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
LAPTM4B-201ENST00000445593 ABCC3O15438 1527 aa22.49■■□□□ 1.19
LAPTM4B-201ENST00000445593 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
LAPTM4B-201ENST00000445593 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
LAPTM4B-201ENST00000445593 IQGAP1P46940 1657 aa22.48■■□□□ 1.19
LAPTM4B-201ENST00000445593 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
LAPTM4B-201ENST00000445593 MAP3K4Q9Y6R4 1608 aa22.48■■□□□ 1.19
LAPTM4B-201ENST00000445593 ADAMTS8Q9UP79 889 aa22.48■■□□□ 1.19
LAPTM4B-201ENST00000445593 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
LAPTM4B-201ENST00000445593 RIMBP3CA6NJZ7 1639 aa22.47■■□□□ 1.19
LAPTM4B-201ENST00000445593 RIMBP3BA6NNM3 1639 aa22.47■■□□□ 1.19
LAPTM4B-201ENST00000445593 RIMBP3Q9UFD9 1639 aa22.47■■□□□ 1.19
LAPTM4B-201ENST00000445593 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
LAPTM4B-201ENST00000445593 DIP2CQ9Y2E4 1556 aa22.46■■□□□ 1.19
LAPTM4B-201ENST00000445593 SLC12A5Q9H2X9 1139 aa22.46■■□□□ 1.19
LAPTM4B-201ENST00000445593 PPP4R2Q9NY27 417 aa22.46■■□□□ 1.19
LAPTM4B-201ENST00000445593 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.18
LAPTM4B-201ENST00000445593 CCDC146Q8IYE0 955 aa22.44■■□□□ 1.18
LAPTM4B-201ENST00000445593 LMTK2Q8IWU2 1503 aa22.44■■□□□ 1.18
LAPTM4B-201ENST00000445593 CARD14Q9BXL6 1004 aa22.44■■□□□ 1.18
LAPTM4B-201ENST00000445593 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
LAPTM4B-201ENST00000445593 MYOM2P54296 1465 aa22.42■■□□□ 1.18
LAPTM4B-201ENST00000445593 ADGRB3O60242 1522 aa22.41■■□□□ 1.18
LAPTM4B-201ENST00000445593 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
LAPTM4B-201ENST00000445593 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
LAPTM4B-201ENST00000445593 VGFO15240 615 aaPredicted RBP22.39■■□□□ 1.17
LAPTM4B-201ENST00000445593 SIGLEC1Q9BZZ2 1709 aa22.39■■□□□ 1.17
LAPTM4B-201ENST00000445593 CABP2Q9NPB3 220 aa22.38■■□□□ 1.17
LAPTM4B-201ENST00000445593 RICTORQ6R327 1708 aa22.37■■□□□ 1.17
LAPTM4B-201ENST00000445593 CAMSAP1Q5T5Y3 1602 aa22.37■■□□□ 1.17
LAPTM4B-201ENST00000445593 PIK3C2GO75747 1445 aa22.37■■□□□ 1.17
LAPTM4B-201ENST00000445593 PLIN1O60240 522 aa22.36■■□□□ 1.17
LAPTM4B-201ENST00000445593 RBM19Q9Y4C8 960 aaKnown RBP22.35■■□□□ 1.17
LAPTM4B-201ENST00000445593 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
LAPTM4B-201ENST00000445593 SYNMO15061 1565 aa22.34■■□□□ 1.17
LAPTM4B-201ENST00000445593 CCDC136Q96JN2 1154 aa22.34■■□□□ 1.17
LAPTM4B-201ENST00000445593 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
LAPTM4B-201ENST00000445593 MINK1Q8N4C8 1332 aaPredicted RBP22.33■■□□□ 1.17
LAPTM4B-201ENST00000445593 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.16
LAPTM4B-201ENST00000445593 RPGRIP1LQ68CZ1 1315 aa22.32■■□□□ 1.16
LAPTM4B-201ENST00000445593 SRPK2P78362 688 aaKnown RBP22.32■■□□□ 1.16
LAPTM4B-201ENST00000445593 KDM5AP29375 1690 aaKnown RBP22.31■■□□□ 1.16
LAPTM4B-201ENST00000445593 IFT172Q9UG01 1749 aa22.31■■□□□ 1.16
LAPTM4B-201ENST00000445593 SLC52A1Q9NWF4 448 aa22.31■■□□□ 1.16
LAPTM4B-201ENST00000445593 NRXN1Q9ULB1 1477 aa22.31■■□□□ 1.16
LAPTM4B-201ENST00000445593 MORC1Q86VD1 984 aa22.3■■□□□ 1.16
LAPTM4B-201ENST00000445593 NSD3Q9BZ95 1437 aa22.3■■□□□ 1.16
LAPTM4B-201ENST00000445593 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
LAPTM4B-201ENST00000445593 MYOM1P52179 1685 aa22.29■■□□□ 1.16
LAPTM4B-201ENST00000445593 POGKQ9P215 609 aa22.29■■□□□ 1.16
LAPTM4B-201ENST00000445593 PPLO60437 1756 aa22.28■■□□□ 1.16
LAPTM4B-201ENST00000445593 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
LAPTM4B-201ENST00000445593 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
LAPTM4B-201ENST00000445593 RRP1P56182 461 aaKnown RBP22.28■■□□□ 1.16
LAPTM4B-201ENST00000445593 EXOC6Q8TAG9 804 aa22.28■■□□□ 1.16
LAPTM4B-201ENST00000445593 ESF1Q9H501 851 aaKnown RBP22.28■■□□□ 1.16
LAPTM4B-201ENST00000445593 APAF1O14727 1248 aa22.27■■□□□ 1.16
LAPTM4B-201ENST00000445593 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
LAPTM4B-201ENST00000445593 ERICH6BQ5W0A0 696 aa22.26■■□□□ 1.15
LAPTM4B-201ENST00000445593 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
LAPTM4B-201ENST00000445593 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
LAPTM4B-201ENST00000445593 NEURL4Q96JN8 1562 aa22.25■■□□□ 1.15
LAPTM4B-201ENST00000445593 EVC2Q86UK5 1308 aa22.24■■□□□ 1.15
LAPTM4B-201ENST00000445593 SLC24A1O60721 1099 aa22.24■■□□□ 1.15
LAPTM4B-201ENST00000445593 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
LAPTM4B-201ENST00000445593 NEXMIFQ5QGS0 1516 aa22.23■■□□□ 1.15
LAPTM4B-201ENST00000445593 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
LAPTM4B-201ENST00000445593 MYO5BQ9ULV0 1848 aa22.21■■□□□ 1.15
LAPTM4B-201ENST00000445593 GLI2P10070 1586 aa22.21■■□□□ 1.15
LAPTM4B-201ENST00000445593 RNF123Q5XPI4 1314 aa22.21■■□□□ 1.15
LAPTM4B-201ENST00000445593 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
LAPTM4B-201ENST00000445593 PIK3C2BO00750 1634 aa22.21■■□□□ 1.15
LAPTM4B-201ENST00000445593 ARHGAP31Q2M1Z3 1444 aa22.2■■□□□ 1.14
LAPTM4B-201ENST00000445593 QRICH2Q9H0J4 1663 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms